RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 KSR2Q6VAB6 950 aa19.37■□□□□ 0.69
SS18L1-202ENST00000370848 METTL22Q9BUU2 404 aaPredicted RBP19.37■□□□□ 0.69
SS18L1-202ENST00000370848 POLLQ9UGP5 575 aa19.37■□□□□ 0.69
SS18L1-202ENST00000370848 SCN9AQ15858 1988 aa19.37■□□□□ 0.69
SS18L1-202ENST00000370848 TRAF5O00463 557 aa19.36■□□□□ 0.69
SS18L1-202ENST00000370848 RAD17O75943 681 aa19.36■□□□□ 0.69
SS18L1-202ENST00000370848 RPS12P25398 132 aaKnown RBP19.36■□□□□ 0.69
SS18L1-202ENST00000370848 ECE1P42892 770 aa19.36■□□□□ 0.69
SS18L1-202ENST00000370848 RPS8P62241 208 aaKnown RBP19.36■□□□□ 0.69
SS18L1-202ENST00000370848 GPSM2P81274 684 aa19.36■□□□□ 0.69
SS18L1-202ENST00000370848 RTL5Q5HYW3 569 aaPredicted RBP19.36■□□□□ 0.69
SS18L1-202ENST00000370848 AIDAQ96BJ3 306 aa19.36■□□□□ 0.69
SS18L1-202ENST00000370848 ABT1Q9ULW3 272 aaKnown RBP19.36■□□□□ 0.69
SS18L1-202ENST00000370848 RTL9Q8NET4 1388 aa19.35■□□□□ 0.69
SS18L1-202ENST00000370848 SAPCD2Q86UD0 394 aa19.35■□□□□ 0.69
SS18L1-202ENST00000370848 TBC1D16Q8TBP0 767 aa19.35■□□□□ 0.69
SS18L1-202ENST00000370848 TRPM4Q8TD43 1214 aa19.35■□□□□ 0.69
SS18L1-202ENST00000370848 CNOT7Q9UIV1 285 aaKnown RBP19.35■□□□□ 0.69
SS18L1-202ENST00000370848 NSFL1CQ9UNZ2 370 aaKnown RBP19.35■□□□□ 0.69
SS18L1-202ENST00000370848 MYH3P11055 1940 aa19.35■□□□□ 0.69
SS18L1-202ENST00000370848 IGKV5-2P06315 115 aa19.34■□□□□ 0.69
SS18L1-202ENST00000370848 HSPA8P11142 646 aaKnown RBP19.34■□□□□ 0.69
SS18L1-202ENST00000370848 FKBP5Q13451 457 aaPredicted RBP19.34■□□□□ 0.69
SS18L1-202ENST00000370848 JARID2Q92833 1246 aaPredicted RBP19.34■□□□□ 0.69
SS18L1-202ENST00000370848 CAPNS2Q96L46 248 aa19.34■□□□□ 0.69
SS18L1-202ENST00000370848 EYA3Q99504 573 aa19.34■□□□□ 0.69
SS18L1-202ENST00000370848 ZNF646O15015 1829 aaPredicted RBP19.33■□□□□ 0.69
SS18L1-202ENST00000370848 PSMD14O00487 310 aa19.33■□□□□ 0.68
SS18L1-202ENST00000370848 PDE8AO60658 829 aa19.33■□□□□ 0.68
SS18L1-202ENST00000370848 MAP2K2P36507 400 aa19.33■□□□□ 0.68
SS18L1-202ENST00000370848 CDC37L1Q7L3B6 337 aa19.33■□□□□ 0.68
SS18L1-202ENST00000370848 BCL2L13Q9BXK5 485 aa19.33■□□□□ 0.68
SS18L1-202ENST00000370848 CWC25Q9NXE8 425 aaPredicted RBP19.33■□□□□ 0.68
SS18L1-202ENST00000370848 F6X3S4 739 aa19.32■□□□□ 0.68
SS18L1-202ENST00000370848 CWF19L2Q2TBE0 894 aaKnown RBP19.32■□□□□ 0.68
SS18L1-202ENST00000370848 CCDC152Q4G0S7 254 aa19.32■□□□□ 0.68
SS18L1-202ENST00000370848 MICALL2Q8IY33 904 aa19.32■□□□□ 0.68
SS18L1-202ENST00000370848 MRPL50Q8N5N7 158 aaKnown RBP19.32■□□□□ 0.68
SS18L1-202ENST00000370848 GLIS2Q9BZE0 524 aaPredicted RBP19.32■□□□□ 0.68
SS18L1-202ENST00000370848 H7C1D1 291 aa19.31■□□□□ 0.68
SS18L1-202ENST00000370848 ECE2O60344 883 aa19.31■□□□□ 0.68
SS18L1-202ENST00000370848 SSH1Q8WYL5 1049 aa19.31■□□□□ 0.68
SS18L1-202ENST00000370848 DBNDD1Q9H9R9 158 aa19.31■□□□□ 0.68
SS18L1-202ENST00000370848 SEC31BQ9NQW1 1179 aa19.31■□□□□ 0.68
SS18L1-202ENST00000370848 CACNA1FO60840 1977 aa19.31■□□□□ 0.68
SS18L1-202ENST00000370848 SHTN1A0MZ66 631 aa19.3■□□□□ 0.68
SS18L1-202ENST00000370848 CELF2O95319 508 aaKnown RBP19.3■□□□□ 0.68
SS18L1-202ENST00000370848 VIL1P09327 827 aaKnown RBP19.3■□□□□ 0.68
SS18L1-202ENST00000370848 LBX1P52954 281 aa19.3■□□□□ 0.68
SS18L1-202ENST00000370848 CYP4F22Q6NT55 531 aa19.3■□□□□ 0.68
SS18L1-202ENST00000370848 DNAAF4Q8WXU2 420 aa19.3■□□□□ 0.68
SS18L1-202ENST00000370848 GPR101Q96P66 508 aaPredicted RBP19.3■□□□□ 0.68
SS18L1-202ENST00000370848 ZBTB12Q9Y330 459 aaPredicted RBP19.3■□□□□ 0.68
SS18L1-202ENST00000370848 NEURL1BA8MQ27 555 aa19.29■□□□□ 0.68
SS18L1-202ENST00000370848 C6orf229H3BNL8 230 aa19.29■□□□□ 0.68
SS18L1-202ENST00000370848 XDHP47989 1333 aa19.27■□□□□ 0.68
SS18L1-202ENST00000370848 EGFRP00533 1210 aa19.27■□□□□ 0.68
SS18L1-202ENST00000370848 BRPF1P55201 1214 aaPredicted RBP19.27■□□□□ 0.68
SS18L1-202ENST00000370848 CTSWP56202 376 aa19.27■□□□□ 0.68
SS18L1-202ENST00000370848 NEXNQ0ZGT2 675 aa19.27■□□□□ 0.68
SS18L1-202ENST00000370848 ZC3H12CQ9C0D7 883 aaKnown RBP19.27■□□□□ 0.68
SS18L1-202ENST00000370848 KCNQ5Q9NR82 932 aa19.27■□□□□ 0.68
SS18L1-202ENST00000370848 GGA1Q9UJY5 639 aa19.27■□□□□ 0.68
SS18L1-202ENST00000370848 RIMBP2O15034 1052 aa19.26■□□□□ 0.67
SS18L1-202ENST00000370848 CA12O43570 354 aa19.26■□□□□ 0.67
SS18L1-202ENST00000370848 UFL1O94874 794 aa19.26■□□□□ 0.67
SS18L1-202ENST00000370848 ZNF280AP59817 542 aaPredicted RBP19.26■□□□□ 0.67
SS18L1-202ENST00000370848 SAMD7Q7Z3H4 446 aa19.26■□□□□ 0.67
SS18L1-202ENST00000370848 AGBL3Q8NEM8 1001 aa19.26■□□□□ 0.67
SS18L1-202ENST00000370848 TTLL11Q8NHH1 800 aa19.26■□□□□ 0.67
SS18L1-202ENST00000370848 GMLQ99445 158 aa19.26■□□□□ 0.67
SS18L1-202ENST00000370848 MED23Q9ULK4 1368 aa19.26■□□□□ 0.67
SS18L1-202ENST00000370848 ZBED9Q6R2W3 1325 aa19.25■□□□□ 0.67
SS18L1-202ENST00000370848 POLR2AP24928 1970 aaKnown RBP19.25■□□□□ 0.67
SS18L1-202ENST00000370848 DOK7Q18PE1 504 aa19.25■□□□□ 0.67
SS18L1-202ENST00000370848 BEND3Q5T5X7 828 aa19.25■□□□□ 0.67
SS18L1-202ENST00000370848 ANKRD18AQ8IVF6 992 aa19.25■□□□□ 0.67
SS18L1-202ENST00000370848 PLA2G12BQ9BX93 195 aa19.25■□□□□ 0.67
SS18L1-202ENST00000370848 SMC4Q9NTJ3 1288 aa19.25■□□□□ 0.67
SS18L1-202ENST00000370848 SPEF2Q9C093 1822 aa19.24■□□□□ 0.67
SS18L1-202ENST00000370848 CAPN15O75808 1086 aa19.24■□□□□ 0.67
SS18L1-202ENST00000370848 GCKRQ14397 625 aa19.24■□□□□ 0.67
SS18L1-202ENST00000370848 PODNQ7Z5L7 613 aa19.24■□□□□ 0.67
SS18L1-202ENST00000370848 LINS1Q8NG48 757 aa19.24■□□□□ 0.67
SS18L1-202ENST00000370848 CDC5LQ99459 802 aaKnown RBP19.24■□□□□ 0.67
SS18L1-202ENST00000370848 BSDC1Q9NW68 430 aaPredicted RBP19.24■□□□□ 0.67
SS18L1-202ENST00000370848 ANKIB1Q9P2G1 1089 aa19.24■□□□□ 0.67
SS18L1-202ENST00000370848 H7C1W4 665 aa19.23■□□□□ 0.67
SS18L1-202ENST00000370848 ATP2B4P23634 1241 aa19.23■□□□□ 0.67
SS18L1-202ENST00000370848 ALDH1L2Q3SY69 923 aa19.23■□□□□ 0.67
SS18L1-202ENST00000370848 TBC1D10BQ4KMP7 808 aaPredicted RBP19.23■□□□□ 0.67
SS18L1-202ENST00000370848 RSBN1LQ6PCB5 846 aaPredicted RBP19.23■□□□□ 0.67
SS18L1-202ENST00000370848 SLC4A10Q6U841 1118 aa19.23■□□□□ 0.67
SS18L1-202ENST00000370848 UBE3BQ7Z3V4 1068 aa19.23■□□□□ 0.67
SS18L1-202ENST00000370848 CCDC85AQ96PX6 553 aaPredicted RBP19.23■□□□□ 0.67
SS18L1-202ENST00000370848 AOC2O75106 756 aa19.22■□□□□ 0.67
SS18L1-202ENST00000370848 CT47B1P0C2W7 299 aaPredicted RBP19.22■□□□□ 0.67
SS18L1-202ENST00000370848 CASP7P55210 303 aa19.22■□□□□ 0.67
SS18L1-202ENST00000370848 NOGQ13253 232 aa19.22■□□□□ 0.67
SS18L1-202ENST00000370848 KIF4BQ2VIQ3 1234 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms