RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 GREM2Q9H772 168 aa8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 HMG20BQ9P0W2 317 aa8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 SNAP23O00161 211 aa8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 SLC27A2O14975 620 aa8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 RNF113AO15541 343 aaKnown RBP8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 PTPN12Q05209 780 aaKnown RBP8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 CKAP2LQ8IYA6 745 aa8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 KBTBD3Q8NAB2 608 aa8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 SPC24Q8NBT2 197 aa8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 RPGRQ92834 1020 aaKnown RBP8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 STAP2Q9UGK3 403 aa8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 CCNL1Q9UK58 526 aaPredicted RBP8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 HEG1Q9ULI3 1381 aa8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 KLF18A0A0U1RQI7 1052 aa8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 NBPF26B4DH59 902 aa8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 HMGB1P09429 215 aaKnown RBP8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 SYT1P21579 422 aa8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 CYP7A1P22680 504 aa8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 HSPA4P34932 840 aa8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 NBPF14Q5TI25 921 aa8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 NBPF10Q6P3W6 841 aaKnown RBP8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 PI16Q6UXB8 463 aa8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 RUFY3Q7L099 469 aa8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 TRIM22Q8IYM9 498 aa8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 NBPF15Q8N660 670 aa8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 MAGEB6Q8N7X4 407 aa8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 CCDC34Q96HJ3 373 aa8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 TRIM34Q9BYJ4 488 aa8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 BCL11BQ9C0K0 894 aaPredicted RBP8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 ADCY9O60503 1353 aa8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 PDE8AO60658 829 aa8.37□□□□□ -1.07
TGFBR3-202ENST00000370399 ADORA1P30542 326 aa8.37□□□□□ -1.07
TGFBR3-202ENST00000370399 RBM5P52756 815 aaKnown RBP eCLIP8.37□□□□□ -1.07
TGFBR3-202ENST00000370399 HLFQ16534 295 aa8.37□□□□□ -1.07
TGFBR3-202ENST00000370399 ADCK5Q3MIX3 580 aa8.37□□□□□ -1.07
TGFBR3-202ENST00000370399 COPRSQ9NQ92 184 aa8.37□□□□□ -1.07
TGFBR3-202ENST00000370399 NSFL1CQ9UNZ2 370 aaKnown RBP8.37□□□□□ -1.07
TGFBR3-202ENST00000370399 ZSCAN22P10073 491 aaPredicted RBP8.37□□□□□ -1.07
TGFBR3-202ENST00000370399 POLA2Q14181 598 aa8.37□□□□□ -1.07
TGFBR3-202ENST00000370399 TTF1Q15361 905 aaPredicted RBP8.37□□□□□ -1.07
TGFBR3-202ENST00000370399 SMIM5Q71RC9 77 aa8.37□□□□□ -1.07
TGFBR3-202ENST00000370399 C8orf76Q96K31 380 aa8.37□□□□□ -1.07
TGFBR3-202ENST00000370399 USP5P45974 858 aa8.37□□□□□ -1.07
TGFBR3-202ENST00000370399 TPM4P67936 248 aa8.37□□□□□ -1.07
TGFBR3-202ENST00000370399 USP48Q86UV5 1035 aa8.37□□□□□ -1.07
TGFBR3-202ENST00000370399 NCOA7Q8NI08 942 aa8.37□□□□□ -1.07
TGFBR3-202ENST00000370399 ZNF396Q96N95 335 aaPredicted RBP8.37□□□□□ -1.07
TGFBR3-202ENST00000370399 ORC3Q9UBD5 711 aaPredicted RBP8.37□□□□□ -1.07
TGFBR3-202ENST00000370399 RIMS1Q86UR5 1692 aaKnown RBP8.37□□□□□ -1.07
TGFBR3-202ENST00000370399 ATP5JP18859 108 aa8.37□□□□□ -1.07
TGFBR3-202ENST00000370399 KLHL40Q2TBA0 621 aa8.37□□□□□ -1.07
TGFBR3-202ENST00000370399 TMEM67Q5HYA8 995 aa8.37□□□□□ -1.07
TGFBR3-202ENST00000370399 TTLL5Q6EMB2 1281 aa8.37□□□□□ -1.07
TGFBR3-202ENST00000370399 TPTE2Q6XPS3 522 aa8.37□□□□□ -1.07
TGFBR3-202ENST00000370399 GIGYF2Q6Y7W6 1299 aaKnown RBP8.37□□□□□ -1.07
TGFBR3-202ENST00000370399 ANTXR1Q9H6X2 564 aa8.37□□□□□ -1.07
TGFBR3-202ENST00000370399 NCOA5Q9HCD5 579 aaKnown RBP8.37□□□□□ -1.07
TGFBR3-202ENST00000370399 TNS3Q68CZ2 1445 aa8.37□□□□□ -1.07
TGFBR3-202ENST00000370399 UQCRFS1P1P0C7P4 283 aa8.36□□□□□ -1.07
TGFBR3-202ENST00000370399 PI4K2BQ8TCG2 481 aa8.36□□□□□ -1.07
TGFBR3-202ENST00000370399 TRIM5Q9C035 493 aa8.36□□□□□ -1.07
TGFBR3-202ENST00000370399 ATG3Q9NT62 314 aa8.36□□□□□ -1.07
TGFBR3-202ENST00000370399 CFAP45Q9UL16 551 aa8.36□□□□□ -1.07
TGFBR3-202ENST00000370399 SLC4A4Q9Y6R1 1079 aa8.36□□□□□ -1.07
TGFBR3-202ENST00000370399 ZFYP08048 801 aaPredicted RBP8.36□□□□□ -1.07
TGFBR3-202ENST00000370399 SLC3A2P08195 630 aaKnown RBP8.36□□□□□ -1.07
TGFBR3-202ENST00000370399 CRKLP46109 303 aaKnown RBP8.36□□□□□ -1.07
TGFBR3-202ENST00000370399 ZNF589Q86UQ0 364 aaPredicted RBP8.36□□□□□ -1.07
TGFBR3-202ENST00000370399 ZBTB38Q8NAP3 1195 aaPredicted RBP8.36□□□□□ -1.07
TGFBR3-202ENST00000370399 NUP62CLQ9H1M0 184 aa8.36□□□□□ -1.07
TGFBR3-202ENST00000370399 SLC12A7Q9Y666 1083 aa8.36□□□□□ -1.07
TGFBR3-202ENST00000370399 AOX1Q06278 1338 aa8.36□□□□□ -1.07
TGFBR3-202ENST00000370399 XRCC6P12956 609 aaKnown RBP eCLIP8.36□□□□□ -1.07
TGFBR3-202ENST00000370399 XBP1P17861 261 aa8.36□□□□□ -1.07
TGFBR3-202ENST00000370399 MCM5P33992 734 aa8.36□□□□□ -1.07
TGFBR3-202ENST00000370399 ZKSCAN3Q9BRR0 538 aa8.36□□□□□ -1.07
TGFBR3-202ENST00000370399 CDCA7Q9BWT1 371 aaPredicted RBP8.36□□□□□ -1.07
TGFBR3-202ENST00000370399 MAP3K15Q6ZN16 1313 aa8.36□□□□□ -1.07
TGFBR3-202ENST00000370399 KCNQ2O43526 872 aa8.36□□□□□ -1.07
TGFBR3-202ENST00000370399 GIMAP6Q6P9H5 292 aa8.36□□□□□ -1.07
TGFBR3-202ENST00000370399 MFSD6Q6ZSS7 791 aa8.36□□□□□ -1.07
TGFBR3-202ENST00000370399 F8W031 263 aaPredicted RBP8.35□□□□□ -1.07
TGFBR3-202ENST00000370399 PRC1O43663 620 aa8.35□□□□□ -1.07
TGFBR3-202ENST00000370399 CTSWP56202 376 aa8.35□□□□□ -1.07
TGFBR3-202ENST00000370399 ZSCAN29Q8IWY8 852 aaPredicted RBP8.35□□□□□ -1.07
TGFBR3-202ENST00000370399 MKNK2Q9HBH9 465 aa8.35□□□□□ -1.07
TGFBR3-202ENST00000370399 SEC31BQ9NQW1 1179 aa8.35□□□□□ -1.07
TGFBR3-202ENST00000370399 TFCP2L1Q9NZI6 479 aa8.35□□□□□ -1.07
TGFBR3-202ENST00000370399 GOLGA8AA7E2F4 631 aa8.35□□□□□ -1.07
TGFBR3-202ENST00000370399 GPAA1O43292 621 aa8.35□□□□□ -1.07
TGFBR3-202ENST00000370399 CCDC192P0DO97 292 aa8.35□□□□□ -1.07
TGFBR3-202ENST00000370399 IKQ13123 557 aaPredicted RBP8.35□□□□□ -1.07
TGFBR3-202ENST00000370399 TPD52L1Q16890 204 aaPredicted RBP8.35□□□□□ -1.07
TGFBR3-202ENST00000370399 ZSCAN23Q3MJ62 389 aa8.35□□□□□ -1.07
TGFBR3-202ENST00000370399 DHX32Q7L7V1 743 aaKnown RBP8.35□□□□□ -1.07
TGFBR3-202ENST00000370399 MBD4O95243 580 aa8.35□□□□□ -1.07
TGFBR3-202ENST00000370399 F13A1P00488 732 aa8.34□□□□□ -1.07
TGFBR3-202ENST00000370399 CHGBP05060 677 aa8.34□□□□□ -1.07
TGFBR3-202ENST00000370399 PCCAP05165 728 aaPredicted RBP8.34□□□□□ -1.07
TGFBR3-202ENST00000370399 HMGN5P82970 282 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 190.6 ms