RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 SLC9C2Q5TAH2 1124 aa6.22□□□□□ -1.41
SMNDC1-202ENST00000369603 ZSCAN30Q86W11 494 aa6.22□□□□□ -1.41
SMNDC1-202ENST00000369603 KBTBD3Q8NAB2 608 aa6.22□□□□□ -1.41
SMNDC1-202ENST00000369603 BRF1Q92994 677 aa6.22□□□□□ -1.41
SMNDC1-202ENST00000369603 DBNDD2Q9BQY9 259 aa6.22□□□□□ -1.41
SMNDC1-202ENST00000369603 KRT23Q9C075 422 aa6.22□□□□□ -1.41
SMNDC1-202ENST00000369603 CEP131Q9UPN4 1083 aa6.22□□□□□ -1.41
SMNDC1-202ENST00000369603 RTCBQ9Y3I0 505 aaKnown RBP6.22□□□□□ -1.41
SMNDC1-202ENST00000369603 SIGLEC1Q9BZZ2 1709 aa6.22□□□□□ -1.41
SMNDC1-202ENST00000369603 MAP2P11137 1827 aaKnown RBP6.22□□□□□ -1.41
SMNDC1-202ENST00000369603 ZNF335Q9H4Z2 1342 aaPredicted RBP6.22□□□□□ -1.41
SMNDC1-202ENST00000369603 MINDY4BA8MYZ0 360 aa6.21□□□□□ -1.41
SMNDC1-202ENST00000369603 IFIT3O14879 490 aaKnown RBP6.21□□□□□ -1.41
SMNDC1-202ENST00000369603 RAD21O60216 631 aa6.21□□□□□ -1.41
SMNDC1-202ENST00000369603 PROSER3Q2NL68 480 aa6.21□□□□□ -1.41
SMNDC1-202ENST00000369603 MFSD6Q6ZSS7 791 aa6.21□□□□□ -1.41
SMNDC1-202ENST00000369603 TMTC2Q8N394 836 aa6.21□□□□□ -1.41
SMNDC1-202ENST00000369603 ZGPATQ8N5A5 531 aaKnown RBP6.21□□□□□ -1.41
SMNDC1-202ENST00000369603 TM6SF1Q9BZW5 370 aa6.21□□□□□ -1.41
SMNDC1-202ENST00000369603 TRIM5Q9C035 493 aa6.21□□□□□ -1.41
SMNDC1-202ENST00000369603 AXIN2Q9Y2T1 843 aa6.21□□□□□ -1.41
SMNDC1-202ENST00000369603 HEG1Q9ULI3 1381 aa6.21□□□□□ -1.41
SMNDC1-202ENST00000369603 SYCE3A1L190 88 aa6.21□□□□□ -1.42
SMNDC1-202ENST00000369603 CTAGE5O15320 804 aa6.21□□□□□ -1.42
SMNDC1-202ENST00000369603 PCCAP05165 728 aaPredicted RBP6.21□□□□□ -1.42
SMNDC1-202ENST00000369603 ITGA6P23229 1130 aa6.21□□□□□ -1.42
SMNDC1-202ENST00000369603 USP5P45974 858 aa6.21□□□□□ -1.42
SMNDC1-202ENST00000369603 POLA2Q14181 598 aa6.21□□□□□ -1.42
SMNDC1-202ENST00000369603 DDX19AQ9NUU7 478 aaKnown RBP6.21□□□□□ -1.42
SMNDC1-202ENST00000369603 MYO5BQ9ULV0 1848 aa6.21□□□□□ -1.42
SMNDC1-202ENST00000369603 BAG3O95817 575 aa6.21□□□□□ -1.42
SMNDC1-202ENST00000369603 ST5P78524 1137 aa6.21□□□□□ -1.42
SMNDC1-202ENST00000369603 PUM3Q15397 648 aaKnown RBP6.21□□□□□ -1.42
SMNDC1-202ENST00000369603 DHX32Q7L7V1 743 aaKnown RBP6.21□□□□□ -1.42
SMNDC1-202ENST00000369603 KLHDC4Q8TBB5 520 aa6.21□□□□□ -1.42
SMNDC1-202ENST00000369603 GOLGA8AA7E2F4 631 aa6.21□□□□□ -1.42
SMNDC1-202ENST00000369603 ATP2B1P20020 1258 aa6.21□□□□□ -1.42
SMNDC1-202ENST00000369603 TIMM10P62072 90 aa6.21□□□□□ -1.42
SMNDC1-202ENST00000369603 MTX1Q13505 466 aa6.21□□□□□ -1.42
SMNDC1-202ENST00000369603 MTERF4Q7Z6M4 381 aaKnown RBP6.21□□□□□ -1.42
SMNDC1-202ENST00000369603 CREBRFQ8IUR6 639 aa6.21□□□□□ -1.42
SMNDC1-202ENST00000369603 ZBTB38Q8NAP3 1195 aaPredicted RBP6.21□□□□□ -1.42
SMNDC1-202ENST00000369603 CTCFLQ8NI51 663 aaPredicted RBP6.21□□□□□ -1.42
SMNDC1-202ENST00000369603 ANKRD2Q9GZV1 360 aa6.21□□□□□ -1.42
SMNDC1-202ENST00000369603 GPR108Q9NPR9 543 aa6.21□□□□□ -1.42
SMNDC1-202ENST00000369603 DACH1Q9UI36 760 aa6.21□□□□□ -1.42
SMNDC1-202ENST00000369603 SNX14Q9Y5W7 946 aa6.21□□□□□ -1.42
SMNDC1-202ENST00000369603 HAND2P61296 217 aa6.2□□□□□ -1.42
SMNDC1-202ENST00000369603 GSTO1P78417 241 aa6.2□□□□□ -1.42
SMNDC1-202ENST00000369603 TMEM67Q5HYA8 995 aa6.2□□□□□ -1.42
SMNDC1-202ENST00000369603 Q6ZUG5 572 aa6.2□□□□□ -1.42
SMNDC1-202ENST00000369603 CEP57L1Q8IYX8 460 aa6.2□□□□□ -1.42
SMNDC1-202ENST00000369603 EAF2Q96CJ1 260 aaPredicted RBP6.2□□□□□ -1.42
SMNDC1-202ENST00000369603 LARP6Q9BRS8 491 aaKnown RBP6.2□□□□□ -1.42
SMNDC1-202ENST00000369603 MROH5Q6ZUA9 1318 aa6.2□□□□□ -1.42
SMNDC1-202ENST00000369603 TULP1O00294 542 aaPredicted RBP6.2□□□□□ -1.42
SMNDC1-202ENST00000369603 CYP27B1O15528 508 aa6.2□□□□□ -1.42
SMNDC1-202ENST00000369603 IARSP41252 1262 aaKnown RBP6.2□□□□□ -1.42
SMNDC1-202ENST00000369603 CCT2P78371 535 aaKnown RBP6.2□□□□□ -1.42
SMNDC1-202ENST00000369603 SSRP1Q08945 709 aaKnown RBP6.2□□□□□ -1.42
SMNDC1-202ENST00000369603 TTLL7Q6ZT98 887 aa6.2□□□□□ -1.42
SMNDC1-202ENST00000369603 STK11IPQ8N1F8 1099 aa6.2□□□□□ -1.42
SMNDC1-202ENST00000369603 XAGE2Q96GT9 111 aa6.2□□□□□ -1.42
SMNDC1-202ENST00000369603 CRNKL1Q9BZJ0 848 aaKnown RBP6.2□□□□□ -1.42
SMNDC1-202ENST00000369603 MKNK2Q9HBH9 465 aa6.2□□□□□ -1.42
SMNDC1-202ENST00000369603 ATG3Q9NT62 314 aa6.2□□□□□ -1.42
SMNDC1-202ENST00000369603 ORC3Q9UBD5 711 aaPredicted RBP6.2□□□□□ -1.42
SMNDC1-202ENST00000369603 CTDP1Q9Y5B0 961 aaPredicted RBP6.2□□□□□ -1.42
SMNDC1-202ENST00000369603 DCCP43146 1447 aa6.2□□□□□ -1.42
SMNDC1-202ENST00000369603 MAP3K15Q6ZN16 1313 aa6.2□□□□□ -1.42
SMNDC1-202ENST00000369603 ADGRB2O60241 1585 aa6.2□□□□□ -1.42
SMNDC1-202ENST00000369603 CAVIN2O95810 425 aa6.2□□□□□ -1.42
SMNDC1-202ENST00000369603 F13A1P00488 732 aa6.2□□□□□ -1.42
SMNDC1-202ENST00000369603 METAP2P50579 478 aaKnown RBP eCLIP6.2□□□□□ -1.42
SMNDC1-202ENST00000369603 PDE4BQ07343 736 aa6.2□□□□□ -1.42
SMNDC1-202ENST00000369603 SOGA3Q5TF21 947 aa6.2□□□□□ -1.42
SMNDC1-202ENST00000369603 CATIPQ7Z7H3 387 aa6.2□□□□□ -1.42
SMNDC1-202ENST00000369603 APPBP2Q92624 585 aa6.2□□□□□ -1.42
SMNDC1-202ENST00000369603 PES1O00541 588 aaKnown RBP6.19□□□□□ -1.42
SMNDC1-202ENST00000369603 SLC27A2O14975 620 aa6.19□□□□□ -1.42
SMNDC1-202ENST00000369603 RANBP6O60518 1105 aaKnown RBP6.19□□□□□ -1.42
SMNDC1-202ENST00000369603 CIAO1O76071 339 aa6.19□□□□□ -1.42
SMNDC1-202ENST00000369603 POLR3DP05423 398 aaPredicted RBP6.19□□□□□ -1.42
SMNDC1-202ENST00000369603 CYP7A1P22680 504 aa6.19□□□□□ -1.42
SMNDC1-202ENST00000369603 IL6STP40189 918 aaPredicted RBP6.19□□□□□ -1.42
SMNDC1-202ENST00000369603 TICAM2Q86XR7 235 aa6.19□□□□□ -1.42
SMNDC1-202ENST00000369603 NECAB1Q8N987 351 aa6.19□□□□□ -1.42
SMNDC1-202ENST00000369603 LPIN2Q92539 896 aa6.19□□□□□ -1.42
SMNDC1-202ENST00000369603 THRAP3Q9Y2W1 955 aaKnown RBP6.19□□□□□ -1.42
SMNDC1-202ENST00000369603 UQCRHLA0A096LP55 91 aa6.19□□□□□ -1.42
SMNDC1-202ENST00000369603 KLF18A0A0U1RQI7 1052 aa6.19□□□□□ -1.42
SMNDC1-202ENST00000369603 KDM4AO75164 1064 aa6.19□□□□□ -1.42
SMNDC1-202ENST00000369603 UQCRHP07919 91 aa6.19□□□□□ -1.42
SMNDC1-202ENST00000369603 RPS6KB1P23443 525 aa6.19□□□□□ -1.42
SMNDC1-202ENST00000369603 CCDC178Q5BJE1 867 aa6.19□□□□□ -1.42
SMNDC1-202ENST00000369603 GIGYF2Q6Y7W6 1299 aaKnown RBP6.19□□□□□ -1.42
SMNDC1-202ENST00000369603 ESR2Q92731 530 aa6.19□□□□□ -1.42
SMNDC1-202ENST00000369603 PDCL3Q9H2J4 239 aa6.19□□□□□ -1.42
SMNDC1-202ENST00000369603 MTMR7Q9Y216 660 aa6.19□□□□□ -1.42
SMNDC1-202ENST00000369603 UBR1Q8IWV7 1749 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms