RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 TMC6Q7Z403 805 aa14.39□□□□□ -0.11
PHGDH-201ENST00000369407 NBPF11Q86T75 865 aa14.39□□□□□ -0.11
PHGDH-201ENST00000369407 KLHL34Q8N239 644 aa14.39□□□□□ -0.11
PHGDH-201ENST00000369407 CFAP45Q9UL16 551 aa14.39□□□□□ -0.11
PHGDH-201ENST00000369407 APOBRQ0VD83 1088 aa14.38□□□□□ -0.11
PHGDH-201ENST00000369407 TEFQ10587 303 aa14.38□□□□□ -0.11
PHGDH-201ENST00000369407 OTUD7BQ6GQQ9 843 aa14.38□□□□□ -0.11
PHGDH-201ENST00000369407 ESF1Q9H501 851 aaKnown RBP14.38□□□□□ -0.11
PHGDH-201ENST00000369407 SPATA31D1Q6ZQQ2 1576 aa14.38□□□□□ -0.11
PHGDH-201ENST00000369407 POLR3GO15318 223 aaPredicted RBP14.38□□□□□ -0.11
PHGDH-201ENST00000369407 TNNT3P45378 269 aaPredicted RBP14.38□□□□□ -0.11
PHGDH-201ENST00000369407 ERC1Q8IUD2 1116 aa14.38□□□□□ -0.11
PHGDH-201ENST00000369407 SDF4Q9BRK5 362 aa14.38□□□□□ -0.11
PHGDH-201ENST00000369407 EPC1Q9H2F5 836 aa14.38□□□□□ -0.11
PHGDH-201ENST00000369407 ABTB2Q8N961 1025 aa14.38□□□□□ -0.11
PHGDH-201ENST00000369407 TMX1Q9H3N1 280 aa14.38□□□□□ -0.11
PHGDH-201ENST00000369407 IFNKQ9P0W0 207 aa14.38□□□□□ -0.11
PHGDH-201ENST00000369407 CYP21A2P08686 494 aa14.37□□□□□ -0.11
PHGDH-201ENST00000369407 GOLGA8FQ08AF8 430 aa14.37□□□□□ -0.11
PHGDH-201ENST00000369407 GOLGA8DPQ0D2H9 430 aa14.37□□□□□ -0.11
PHGDH-201ENST00000369407 XPO4Q9C0E2 1151 aaKnown RBP14.37□□□□□ -0.11
PHGDH-201ENST00000369407 LTKP29376 864 aa14.37□□□□□ -0.11
PHGDH-201ENST00000369407 CLCN6P51797 869 aa14.37□□□□□ -0.11
PHGDH-201ENST00000369407 MTX1Q13505 466 aa14.37□□□□□ -0.11
PHGDH-201ENST00000369407 DPCR1Q3MIW9 517 aa14.37□□□□□ -0.11
PHGDH-201ENST00000369407 TAF3Q5VWG9 929 aa14.37□□□□□ -0.11
PHGDH-201ENST00000369407 PPP1R13BQ96KQ4 1090 aa14.37□□□□□ -0.11
PHGDH-201ENST00000369407 HIP1O00291 1037 aa14.36□□□□□ -0.11
PHGDH-201ENST00000369407 ARHGAP29Q52LW3 1261 aa14.36□□□□□ -0.11
PHGDH-201ENST00000369407 NBPF6Q5VWK0 638 aa14.36□□□□□ -0.11
PHGDH-201ENST00000369407 ARMCX5Q6P1M9 558 aa14.36□□□□□ -0.11
PHGDH-201ENST00000369407 STOX1Q6ZVD7 989 aa14.36□□□□□ -0.11
PHGDH-201ENST00000369407 DDX46Q7L014 1031 aaKnown RBP14.36□□□□□ -0.11
PHGDH-201ENST00000369407 HOMER1Q86YM7 354 aa14.36□□□□□ -0.11
PHGDH-201ENST00000369407 CEP57L1Q8IYX8 460 aa14.36□□□□□ -0.11
PHGDH-201ENST00000369407 FAM177A1Q8N128 213 aaPredicted RBP14.36□□□□□ -0.11
PHGDH-201ENST00000369407 LRRC59Q96AG4 307 aaKnown RBP14.36□□□□□ -0.11
PHGDH-201ENST00000369407 NBPF4Q96M43 638 aa14.36□□□□□ -0.11
PHGDH-201ENST00000369407 NOL10Q9BSC4 688 aaKnown RBP14.36□□□□□ -0.11
PHGDH-201ENST00000369407 ANO10Q9NW15 660 aa14.36□□□□□ -0.11
PHGDH-201ENST00000369407 PTPDC1A2A3K4 754 aa14.36□□□□□ -0.11
PHGDH-201ENST00000369407 NEMFO60524 1076 aa14.36□□□□□ -0.11
PHGDH-201ENST00000369407 SIRT1Q96EB6 747 aa14.36□□□□□ -0.11
PHGDH-201ENST00000369407 CTDNEP1O95476 244 aa14.36□□□□□ -0.11
PHGDH-201ENST00000369407 RAB11FIP4Q86YS3 637 aa14.36□□□□□ -0.11
PHGDH-201ENST00000369407 SECISBP2LQ93073 1101 aaKnown RBP14.36□□□□□ -0.11
PHGDH-201ENST00000369407 MED23Q9ULK4 1368 aa14.35□□□□□ -0.11
PHGDH-201ENST00000369407 GRM8O00222 908 aa14.35□□□□□ -0.11
PHGDH-201ENST00000369407 EPHA10Q5JZY3 1008 aa14.35□□□□□ -0.11
PHGDH-201ENST00000369407 DHX37Q8IY37 1157 aaKnown RBP14.35□□□□□ -0.11
PHGDH-201ENST00000369407 DBF4Q9UBU7 674 aaPredicted RBP14.35□□□□□ -0.11
PHGDH-201ENST00000369407 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.35□□□□□ -0.11
PHGDH-201ENST00000369407 CCDC66A2RUB6 948 aa14.35□□□□□ -0.11
PHGDH-201ENST00000369407 SEC31AO94979 1220 aaKnown RBP14.35□□□□□ -0.11
PHGDH-201ENST00000369407 PIP4K2AP48426 406 aaPredicted RBP14.35□□□□□ -0.11
PHGDH-201ENST00000369407 NSUN7Q8NE18 718 aaKnown RBP14.35□□□□□ -0.11
PHGDH-201ENST00000369407 TIGD1Q96MW7 591 aa14.35□□□□□ -0.11
PHGDH-201ENST00000369407 ZSCAN16Q9H4T2 348 aaPredicted RBP14.35□□□□□ -0.11
PHGDH-201ENST00000369407 DNAI1Q9UI46 699 aa14.35□□□□□ -0.11
PHGDH-201ENST00000369407 RCOR1Q9UKL0 485 aa14.35□□□□□ -0.11
PHGDH-201ENST00000369407 POLR3DP05423 398 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-201ENST00000369407 FAM160A1Q05DH4 1040 aa14.34□□□□□ -0.11
PHGDH-201ENST00000369407 ZNF530Q6P9A1 599 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-201ENST00000369407 KSR2Q6VAB6 950 aa14.34□□□□□ -0.11
PHGDH-201ENST00000369407 GJB4Q9NTQ9 266 aa14.34□□□□□ -0.11
PHGDH-201ENST00000369407 FHOD1Q9Y613 1164 aa14.34□□□□□ -0.11
PHGDH-201ENST00000369407 NDUFA8P51970 172 aa14.34□□□□□ -0.11
PHGDH-201ENST00000369407 ENGASEQ8NFI3 743 aa14.34□□□□□ -0.11
PHGDH-201ENST00000369407 FAM53CQ9NYF3 392 aa14.34□□□□□ -0.11
PHGDH-201ENST00000369407 AMOTL2Q9Y2J4 779 aa14.34□□□□□ -0.11
PHGDH-201ENST00000369407 TECPR2O15040 1411 aa14.34□□□□□ -0.11
PHGDH-201ENST00000369407 MYL6BP14649 208 aa14.34□□□□□ -0.11
PHGDH-201ENST00000369407 LMOD1P29536 600 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-201ENST00000369407 HDGFP51858 240 aaKnown RBP14.34□□□□□ -0.11
PHGDH-201ENST00000369407 ILDR1Q86SU0 546 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-201ENST00000369407 GPHNQ9NQX3 736 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-201ENST00000369407 HMG20BQ9P0W2 317 aa14.34□□□□□ -0.11
PHGDH-201ENST00000369407 PCDHA7Q9UN72 937 aa14.34□□□□□ -0.11
PHGDH-201ENST00000369407 GIGYF1O75420 1035 aaPredicted RBP14.33□□□□□ -0.12
PHGDH-201ENST00000369407 CAVIN2O95810 425 aa14.33□□□□□ -0.12
PHGDH-201ENST00000369407 NEK11Q8NG66 645 aa14.33□□□□□ -0.12
PHGDH-201ENST00000369407 ZCCHC17Q9NP64 241 aaKnown RBP14.33□□□□□ -0.12
PHGDH-201ENST00000369407 DBNLQ9UJU6 430 aaKnown RBP14.33□□□□□ -0.12
PHGDH-201ENST00000369407 SETD1BQ9UPS6 1966 aaKnown RBP14.33□□□□□ -0.12
PHGDH-201ENST00000369407 CTAGE5O15320 804 aa14.33□□□□□ -0.12
PHGDH-201ENST00000369407 ZRSR1Q15695 479 aaKnown RBP14.33□□□□□ -0.12
PHGDH-201ENST00000369407 PNMA6AP0CW24 399 aaPredicted RBP14.32□□□□□ -0.12
PHGDH-201ENST00000369407 H2AFXP16104 143 aaPredicted RBP14.32□□□□□ -0.12
PHGDH-201ENST00000369407 SFPQP23246 707 aaKnown RBP eCLIP14.32□□□□□ -0.12
PHGDH-201ENST00000369407 PLA2G4AP47712 749 aa14.32□□□□□ -0.12
PHGDH-201ENST00000369407 HNRNPH2P55795 449 aaKnown RBP14.32□□□□□ -0.12
PHGDH-201ENST00000369407 HSP90AA4PQ58FG1 418 aa14.32□□□□□ -0.12
PHGDH-201ENST00000369407 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.32□□□□□ -0.121e-6■□□□□ 10.9
PHGDH-201ENST00000369407 CRYBG1Q9Y4K1 1723 aa14.32□□□□□ -0.12
PHGDH-201ENST00000369407 ATP1A3P13637 1013 aa14.32□□□□□ -0.12
PHGDH-201ENST00000369407 TFCP2Q12800 502 aa14.32□□□□□ -0.12
PHGDH-201ENST00000369407 BMS1Q14692 1282 aaKnown RBP14.32□□□□□ -0.12
PHGDH-201ENST00000369407 SF3A1Q15459 793 aaKnown RBP14.32□□□□□ -0.12
PHGDH-201ENST00000369407 RBM33Q96EV2 1170 aaKnown RBP14.32□□□□□ -0.12
PHGDH-201ENST00000369407 ADGRL3Q9HAR2 1447 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms