RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 ITGA6P23229 1130 aa20.91■□□□□ 0.94
LMNA-205ENST00000368299 LRRFIP1Q32MZ4 808 aaKnown RBP20.91■□□□□ 0.94
LMNA-205ENST00000368299 MCTP1Q6DN14 999 aa20.91■□□□□ 0.94
LMNA-205ENST00000368299 U3KPZ7 1027 aaPredicted RBP20.91■□□□□ 0.94
LMNA-205ENST00000368299 XRCC6P12956 609 aaKnown RBP eCLIP20.9■□□□□ 0.946e-7■■■■□ 20.4
LMNA-205ENST00000368299 KLHL40Q2TBA0 621 aa20.9■□□□□ 0.94
LMNA-205ENST00000368299 GORABQ5T7V8 394 aa20.9■□□□□ 0.94
LMNA-205ENST00000368299 ALDH8A1Q9H2A2 487 aaPredicted RBP20.9■□□□□ 0.94
LMNA-205ENST00000368299 ANO8Q9HCE9 1232 aaPredicted RBP20.9■□□□□ 0.94
LMNA-205ENST00000368299 ABCC12Q96J65 1359 aa20.9■□□□□ 0.94
LMNA-205ENST00000368299 RREB1Q92766 1687 aa20.9■□□□□ 0.94
LMNA-205ENST00000368299 ANKRD1Q15327 319 aa20.89■□□□□ 0.94
LMNA-205ENST00000368299 LDHAL6AQ6ZMR3 332 aa20.89■□□□□ 0.94
LMNA-205ENST00000368299 SYNE4Q8N205 404 aa20.89■□□□□ 0.94
LMNA-205ENST00000368299 CCDC85AQ96PX6 553 aaPredicted RBP20.89■□□□□ 0.94
LMNA-205ENST00000368299 GREM2Q9H772 168 aa20.89■□□□□ 0.94
LMNA-205ENST00000368299 RIPOR2Q9Y4F9 1068 aa20.89■□□□□ 0.94
LMNA-205ENST00000368299 CPA1P15085 419 aa20.89■□□□□ 0.93
LMNA-205ENST00000368299 TTC39AQ5SRH9 613 aa20.89■□□□□ 0.93
LMNA-205ENST00000368299 BLOC1S2Q6QNY1 142 aa20.89■□□□□ 0.93
LMNA-205ENST00000368299 XAGE2Q96GT9 111 aa20.89■□□□□ 0.93
LMNA-205ENST00000368299 UBN2Q6ZU65 1347 aa20.89■□□□□ 0.93
LMNA-205ENST00000368299 WDR33Q9C0J8 1336 aaKnown RBP20.89■□□□□ 0.93
LMNA-205ENST00000368299 MYH3P11055 1940 aa20.88■□□□□ 0.93
LMNA-205ENST00000368299 VPS72Q15906 364 aa20.88■□□□□ 0.93
LMNA-205ENST00000368299 UBAP1LF5GYI3 381 aa20.88■□□□□ 0.93
LMNA-205ENST00000368299 PARP10Q53GL7 1025 aa20.88■□□□□ 0.93
LMNA-205ENST00000368299 METTL24Q5JXM2 366 aa20.88■□□□□ 0.93
LMNA-205ENST00000368299 DDX49Q9Y6V7 483 aaKnown RBP20.88■□□□□ 0.93
LMNA-205ENST00000368299 HSP90B1P14625 803 aaKnown RBP20.87■□□□□ 0.93
LMNA-205ENST00000368299 ZMYM1Q5SVZ6 1142 aa20.87■□□□□ 0.93
LMNA-205ENST00000368299 RIC1Q4ADV7 1423 aa20.87■□□□□ 0.93
LMNA-205ENST00000368299 CNNM1Q9NRU3 951 aa20.87■□□□□ 0.93
LMNA-205ENST00000368299 LMBRD1Q9NUN5 540 aa20.87■□□□□ 0.93
LMNA-205ENST00000368299 RNF113AO15541 343 aaKnown RBP20.86■□□□□ 0.93
LMNA-205ENST00000368299 RPS6KB1P23443 525 aa20.86■□□□□ 0.93
LMNA-205ENST00000368299 ITPK1Q13572 414 aa20.86■□□□□ 0.93
LMNA-205ENST00000368299 ATP2B3Q16720 1220 aa20.86■□□□□ 0.93
LMNA-205ENST00000368299 NGLY1Q96IV0 654 aa20.86■□□□□ 0.93
LMNA-205ENST00000368299 DSCC1Q9BVC3 393 aa20.86■□□□□ 0.93
LMNA-205ENST00000368299 SMC3Q9UQE7 1217 aa20.86■□□□□ 0.93
LMNA-205ENST00000368299 ZFYP08048 801 aaPredicted RBP20.85■□□□□ 0.93
LMNA-205ENST00000368299 MRE11P49959 708 aa20.85■□□□□ 0.93
LMNA-205ENST00000368299 SEC62Q99442 399 aaKnown RBP20.85■□□□□ 0.93
LMNA-205ENST00000368299 CAMTA2O94983 1202 aa20.85■□□□□ 0.93
LMNA-205ENST00000368299 FAM98CQ17RN3 349 aaKnown RBP20.85■□□□□ 0.93
LMNA-205ENST00000368299 UTP14AQ9BVJ6 771 aaKnown RBP20.85■□□□□ 0.93
LMNA-205ENST00000368299 BCL9LQ86UU0 1499 aa20.85■□□□□ 0.93
LMNA-205ENST00000368299 ZNF831Q5JPB2 1677 aa20.84■□□□□ 0.93
LMNA-205ENST00000368299 ADORA1P30542 326 aa20.84■□□□□ 0.93
LMNA-205ENST00000368299 CCDC129Q6ZRS4 1044 aa20.84■□□□□ 0.93
LMNA-205ENST00000368299 ZNF512BQ96KM6 892 aaPredicted RBP20.84■□□□□ 0.93
LMNA-205ENST00000368299 C8orf37Q96NL8 207 aa20.84■□□□□ 0.93
LMNA-205ENST00000368299 PDIA4P13667 645 aaKnown RBP20.84■□□□□ 0.93
LMNA-205ENST00000368299 FKBP4Q02790 459 aaKnown RBP eCLIP20.83■□□□□ 0.93
LMNA-205ENST00000368299 SUSD4Q5VX71 490 aa20.83■□□□□ 0.93
LMNA-205ENST00000368299 VGLL2Q8N8G2 317 aa20.83■□□□□ 0.92
LMNA-205ENST00000368299 NEK1Q96PY6 1258 aa20.83■□□□□ 0.92
LMNA-205ENST00000368299 ZNF652Q9Y2D9 606 aa20.83■□□□□ 0.92
LMNA-205ENST00000368299 MROH5Q6ZUA9 1318 aa20.82■□□□□ 0.92
LMNA-205ENST00000368299 PDE8BO95263 885 aa20.82■□□□□ 0.92
LMNA-205ENST00000368299 CHGBP05060 677 aa20.82■□□□□ 0.92
LMNA-205ENST00000368299 FNBP4Q8N3X1 1017 aaPredicted RBP20.82■□□□□ 0.92
LMNA-205ENST00000368299 LARP6Q9BRS8 491 aaKnown RBP20.82■□□□□ 0.92
LMNA-205ENST00000368299 KCNQ2O43526 872 aa20.81■□□□□ 0.92
LMNA-205ENST00000368299 PRPF40AO75400 957 aaKnown RBP20.81■□□□□ 0.92
LMNA-205ENST00000368299 LARGE1O95461 756 aa20.81■□□□□ 0.92
LMNA-205ENST00000368299 HMGB1P09429 215 aaKnown RBP20.81■□□□□ 0.92
LMNA-205ENST00000368299 ME3Q16798 604 aa20.81■□□□□ 0.92
LMNA-205ENST00000368299 CCDC83Q8IWF9 413 aa20.81■□□□□ 0.92
LMNA-205ENST00000368299 LRP5O75197 1615 aa20.81■□□□□ 0.92
LMNA-205ENST00000368299 PANK2Q9BZ23 570 aa20.81■□□□□ 0.92
LMNA-205ENST00000368299 TPCN1Q9ULQ1 816 aa20.81■□□□□ 0.92
LMNA-205ENST00000368299 CYP21A2P08686 494 aa20.8■□□□□ 0.92
LMNA-205ENST00000368299 FOXD4L5Q5VV16 416 aaPredicted RBP20.8■□□□□ 0.92
LMNA-205ENST00000368299 CLEC4GQ6UXB4 293 aa20.8■□□□□ 0.92
LMNA-205ENST00000368299 FOXD4L4Q8WXT5 416 aaPredicted RBP20.8■□□□□ 0.92
LMNA-205ENST00000368299 MAST3O60307 1309 aa20.8■□□□□ 0.92
LMNA-205ENST00000368299 STX6O43752 255 aa20.8■□□□□ 0.92
LMNA-205ENST00000368299 TAF6LQ9Y6J9 622 aa20.8■□□□□ 0.92
LMNA-205ENST00000368299 SPATA31A6Q5VVP1 1343 aa20.8■□□□□ 0.92
LMNA-205ENST00000368299 COL5A3P25940 1745 aaPredicted RBP20.79■□□□□ 0.92
LMNA-205ENST00000368299 RGL2O15211 777 aa20.79■□□□□ 0.92
LMNA-205ENST00000368299 ZSCAN22P10073 491 aaPredicted RBP20.79■□□□□ 0.92
LMNA-205ENST00000368299 SYT1P21579 422 aa20.79■□□□□ 0.92
LMNA-205ENST00000368299 NIP7Q9Y221 180 aaKnown RBP eCLIP20.79■□□□□ 0.92
LMNA-205ENST00000368299 ATP6V1DQ9Y5K8 247 aa20.79■□□□□ 0.92
LMNA-205ENST00000368299 MYH14Q7Z406 1995 aaKnown RBP20.79■□□□□ 0.92
LMNA-205ENST00000368299 RTL9Q8NET4 1388 aa20.79■□□□□ 0.92
LMNA-205ENST00000368299 HSPD1P10809 573 aaKnown RBP20.79■□□□□ 0.92
LMNA-205ENST00000368299 GJB2P29033 226 aa20.79■□□□□ 0.92
LMNA-205ENST00000368299 PUM3Q15397 648 aaKnown RBP20.79■□□□□ 0.92
LMNA-205ENST00000368299 CCDC152Q4G0S7 254 aa20.79■□□□□ 0.92
LMNA-205ENST00000368299 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.79■□□□□ 0.927e-7■■■□□ 15.7
LMNA-205ENST00000368299 GRPEL1Q9HAV7 217 aa20.79■□□□□ 0.92
LMNA-205ENST00000368299 MBD3O95983 291 aa20.78■□□□□ 0.92
LMNA-205ENST00000368299 TOB2Q14106 344 aaPredicted RBP20.78■□□□□ 0.92
LMNA-205ENST00000368299 TTF1Q15361 905 aaPredicted RBP20.78■□□□□ 0.92
LMNA-205ENST00000368299 LPIN2Q92539 896 aa20.78■□□□□ 0.92
LMNA-205ENST00000368299 RRAGDQ9NQL2 400 aaPredicted RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms