RNA–Protein interactions for RNA: ENST00000367427.7

CFHR3-202, Transcript of complement factor H related 3, humanhuman

TSL 5

Gene CFHR3, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-202ENST00000367427 USP17L10C9JJH3 530 aa11.5□□□□□ -0.57
CFHR3-202ENST00000367427 USP17L13C9JLJ4 530 aa11.5□□□□□ -0.57
CFHR3-202ENST00000367427 USP17L12C9JPN9 530 aa11.5□□□□□ -0.57
CFHR3-202ENST00000367427 USP17L11C9JVI0 530 aa11.5□□□□□ -0.57
CFHR3-202ENST00000367427 USP17L21D6R901 530 aa11.5□□□□□ -0.57
CFHR3-202ENST00000367427 USP17L18D6R9N7 530 aa11.5□□□□□ -0.57
CFHR3-202ENST00000367427 USP17L22D6RA61 530 aa11.5□□□□□ -0.57
CFHR3-202ENST00000367427 USP17L17D6RBQ6 530 aa11.5□□□□□ -0.57
CFHR3-202ENST00000367427 USP17L19D6RCP7 530 aa11.5□□□□□ -0.57
CFHR3-202ENST00000367427 USP17L20D6RJB6 530 aa11.5□□□□□ -0.57
CFHR3-202ENST00000367427 EGFRP00533 1210 aa11.5□□□□□ -0.57
CFHR3-202ENST00000367427 NRLP54845 237 aa11.5□□□□□ -0.57
CFHR3-202ENST00000367427 USP17L24Q0WX57 530 aa11.5□□□□□ -0.57
CFHR3-202ENST00000367427 C11orf91Q3C1V1 193 aa11.5□□□□□ -0.57
CFHR3-202ENST00000367427 CCER1Q8TC90 406 aaPredicted RBP11.5□□□□□ -0.57
CFHR3-202ENST00000367427 STK32AQ8WU08 396 aa11.5□□□□□ -0.57
CFHR3-202ENST00000367427 SMG9Q9H0W8 520 aaKnown RBP11.5□□□□□ -0.57
CFHR3-202ENST00000367427 TLR7Q9NYK1 1049 aaKnown RBP11.49□□□□□ -0.57
CFHR3-202ENST00000367427 FOXO3O43524 673 aa11.48□□□□□ -0.57
CFHR3-202ENST00000367427 HFE2Q6ZVN8 426 aa11.48□□□□□ -0.57
CFHR3-202ENST00000367427 KRTAP19-1Q8IUB9 90 aa11.48□□□□□ -0.57
CFHR3-202ENST00000367427 TMEM130Q8N3G9 435 aa11.48□□□□□ -0.57
CFHR3-202ENST00000367427 LRFN2Q9ULH4 789 aa11.47□□□□□ -0.57
CFHR3-202ENST00000367427 RTCBQ9Y3I0 505 aaKnown RBP11.47□□□□□ -0.57
CFHR3-202ENST00000367427 SLC51AQ86UW1 340 aa11.46□□□□□ -0.57
CFHR3-202ENST00000367427 USP20Q9Y2K6 914 aa11.46□□□□□ -0.57
CFHR3-202ENST00000367427 AKTIPQ9H8T0 292 aa11.45□□□□□ -0.58
CFHR3-202ENST00000367427 HOXD8P13378 290 aaPredicted RBP11.44□□□□□ -0.58
CFHR3-202ENST00000367427 TXNDC2Q86VQ3 553 aa11.44□□□□□ -0.58
CFHR3-202ENST00000367427 LOC102724428A0A0B4J2F2 783 aa11.43□□□□□ -0.58
CFHR3-202ENST00000367427 J3QW42 95 aa11.43□□□□□ -0.58
CFHR3-202ENST00000367427 ALX3O95076 343 aa11.43□□□□□ -0.58
CFHR3-202ENST00000367427 ARID4AP29374 1257 aaPredicted RBP11.43□□□□□ -0.58
CFHR3-202ENST00000367427 SIK1P57059 783 aa11.43□□□□□ -0.58
CFHR3-202ENST00000367427 PLD4Q96BZ4 506 aa11.43□□□□□ -0.58
CFHR3-202ENST00000367427 KCNMB2Q9Y691 235 aa11.43□□□□□ -0.58
CFHR3-202ENST00000367427 F8W735 103 aaPredicted RBP11.42□□□□□ -0.58
CFHR3-202ENST00000367427 XYLBO75191 536 aa11.42□□□□□ -0.58
CFHR3-202ENST00000367427 EIF2AK2P19525 551 aaKnown RBP11.42□□□□□ -0.58
CFHR3-202ENST00000367427 Q6ZS46 218 aa11.42□□□□□ -0.58
CFHR3-202ENST00000367427 FAM200AQ8TCP9 573 aa11.42□□□□□ -0.58
CFHR3-202ENST00000367427 MRPL18Q9H0U6 180 aaKnown RBP11.42□□□□□ -0.58
CFHR3-202ENST00000367427 PHLDB3Q6NSJ2 640 aa11.41□□□□□ -0.58
CFHR3-202ENST00000367427 MMP20O60882 483 aa11.4□□□□□ -0.58
CFHR3-202ENST00000367427 FSTP19883 344 aa11.4□□□□□ -0.58
CFHR3-202ENST00000367427 SSFA2P28290 1259 aa11.4□□□□□ -0.58
CFHR3-202ENST00000367427 SETDB1Q15047 1291 aa11.4□□□□□ -0.58
CFHR3-202ENST00000367427 KRTAP9-9Q9BYP9 154 aa11.4□□□□□ -0.58
CFHR3-202ENST00000367427 KRTAP9-4Q9BYQ2 154 aa11.4□□□□□ -0.58
CFHR3-202ENST00000367427 SOX18P35713 384 aa11.39□□□□□ -0.59
CFHR3-202ENST00000367427 TREML1Q86YW5 311 aa11.39□□□□□ -0.59
CFHR3-202ENST00000367427 IL22RA1Q8N6P7 574 aa11.39□□□□□ -0.59
CFHR3-202ENST00000367427 SRA1Q9HD15 236 aaKnown RBP11.39□□□□□ -0.59
CFHR3-202ENST00000367427 COX20Q5RI15 118 aa11.38□□□□□ -0.59
CFHR3-202ENST00000367427 RGL4Q8IZJ4 473 aa11.38□□□□□ -0.59
CFHR3-202ENST00000367427 CLP1Q92989 425 aaKnown RBP11.38□□□□□ -0.59
CFHR3-202ENST00000367427 PSAPP07602 524 aa11.37□□□□□ -0.59
CFHR3-202ENST00000367427 MCTP1Q6DN14 999 aa11.37□□□□□ -0.59
CFHR3-202ENST00000367427 CMTR1Q8N1G2 835 aaKnown RBP11.37□□□□□ -0.59
CFHR3-202ENST00000367427 VTI1AQ96AJ9 217 aa11.37□□□□□ -0.59
CFHR3-202ENST00000367427 CD97P48960 835 aa11.36□□□□□ -0.59
CFHR3-202ENST00000367427 GDF6Q6KF10 455 aaPredicted RBP11.36□□□□□ -0.59
CFHR3-202ENST00000367427 MAP4K3Q8IVH8 894 aa11.36□□□□□ -0.59
CFHR3-202ENST00000367427 NSUN5Q96P11 429 aaKnown RBP11.36□□□□□ -0.59
CFHR3-202ENST00000367427 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.36□□□□□ -0.59
CFHR3-202ENST00000367427 FAM69CQ0P6D2 419 aa11.35□□□□□ -0.59
CFHR3-202ENST00000367427 GOLGA2P5Q9HBQ8 144 aa11.35□□□□□ -0.59
CFHR3-202ENST00000367427 COL17A1Q9UMD9 1497 aaPredicted RBP11.34□□□□□ -0.59
CFHR3-202ENST00000367427 PCMTD2Q9NV79 361 aa11.34□□□□□ -0.59
CFHR3-202ENST00000367427 SLAIN2Q9P270 581 aa11.34□□□□□ -0.59
CFHR3-202ENST00000367427 TM4SF5O14894 197 aa11.33□□□□□ -0.6
CFHR3-202ENST00000367427 GHRHP01286 108 aa11.33□□□□□ -0.6
CFHR3-202ENST00000367427 ERCC3P19447 782 aa11.33□□□□□ -0.6
CFHR3-202ENST00000367427 ATP2B4P23634 1241 aa11.33□□□□□ -0.6
CFHR3-202ENST00000367427 FKBP5Q13451 457 aaPredicted RBP11.33□□□□□ -0.6
CFHR3-202ENST00000367427 TRIM33Q9UPN9 1127 aa11.33□□□□□ -0.6
CFHR3-202ENST00000367427 SSTR4P31391 388 aa11.32□□□□□ -0.6
CFHR3-202ENST00000367427 SWI5Q1ZZU3 235 aa11.32□□□□□ -0.6
CFHR3-202ENST00000367427 ETFBKMTQ8IXQ9 262 aa11.32□□□□□ -0.6
CFHR3-202ENST00000367427 CACTIN-AS1Q8N1I8 211 aa11.32□□□□□ -0.6
CFHR3-202ENST00000367427 AGGF1Q8N302 714 aaeCLIP11.32□□□□□ -0.6
CFHR3-202ENST00000367427 UBL7Q96S82 380 aaPredicted RBP11.32□□□□□ -0.6
CFHR3-202ENST00000367427 MED26O95402 600 aa11.31□□□□□ -0.6
CFHR3-202ENST00000367427 TRIP4Q15650 581 aaPredicted RBP11.31□□□□□ -0.6
CFHR3-202ENST00000367427 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.31□□□□□ -0.6
CFHR3-202ENST00000367427 NLRP13Q86W25 1043 aa11.31□□□□□ -0.6
CFHR3-202ENST00000367427 GALNT11Q8NCW6 608 aa11.31□□□□□ -0.6
CFHR3-202ENST00000367427 DCAF11Q8TEB1 546 aa11.31□□□□□ -0.6
CFHR3-202ENST00000367427 RBM47A0AV96 593 aaKnown RBP11.3□□□□□ -0.6
CFHR3-202ENST00000367427 SOWAHDA6NJG2 315 aa11.3□□□□□ -0.6
CFHR3-202ENST00000367427 FAM26DQ5JW98 314 aa11.3□□□□□ -0.6
CFHR3-202ENST00000367427 MUC3BQ9H195 1237 aa11.3□□□□□ -0.6
CFHR3-202ENST00000367427 RAXQ9Y2V3 346 aa11.3□□□□□ -0.6
CFHR3-202ENST00000367427 SAP130Q9H0E3 1048 aa11.29□□□□□ -0.6
CFHR3-202ENST00000367427 RBSNQ9H1K0 784 aa11.29□□□□□ -0.6
CFHR3-202ENST00000367427 PPME1Q9Y570 386 aa11.29□□□□□ -0.6
CFHR3-202ENST00000367427 SERPINB4P48594 390 aa11.28□□□□□ -0.6
CFHR3-202ENST00000367427 COL13A1Q5TAT6 717 aaPredicted RBP11.28□□□□□ -0.6
CFHR3-202ENST00000367427 KIAA1324LA8MWY0 1029 aaPredicted RBP11.27□□□□□ -0.61
CFHR3-202ENST00000367427 IGLV1-40P01703 118 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms