RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 SYKP43405 635 aa10.34□□□□□ -0.75
SYNE1-205ENST00000367251 SIRT1Q96EB6 747 aa10.34□□□□□ -0.75
SYNE1-205ENST00000367251 ALS2CR12Q96Q35 445 aa10.34□□□□□ -0.75
SYNE1-205ENST00000367251 RANBP6O60518 1105 aaKnown RBP10.34□□□□□ -0.75
SYNE1-205ENST00000367251 GSTO1P78417 241 aa10.34□□□□□ -0.75
SYNE1-205ENST00000367251 CALML4Q96GE6 196 aa10.34□□□□□ -0.75
SYNE1-205ENST00000367251 TCP11L1Q9NUJ3 509 aa10.34□□□□□ -0.75
SYNE1-205ENST00000367251 ANKIB1Q9P2G1 1089 aa10.34□□□□□ -0.75
SYNE1-205ENST00000367251 MSH6P52701 1360 aa10.34□□□□□ -0.75
SYNE1-205ENST00000367251 PAFAH1B1P43034 410 aa10.34□□□□□ -0.75
SYNE1-205ENST00000367251 BRAPQ7Z569 592 aa10.34□□□□□ -0.75
SYNE1-205ENST00000367251 TAX1BP1Q86VP1 789 aa10.34□□□□□ -0.75
SYNE1-205ENST00000367251 C16orf45Q96MC5 204 aaPredicted RBP10.34□□□□□ -0.75
SYNE1-205ENST00000367251 CCDC85AQ96PX6 553 aaPredicted RBP10.34□□□□□ -0.75
SYNE1-205ENST00000367251 SHTN1A0MZ66 631 aa10.33□□□□□ -0.76
SYNE1-205ENST00000367251 ECM2O94769 699 aaPredicted RBP10.33□□□□□ -0.76
SYNE1-205ENST00000367251 NMIQ13287 307 aaPredicted RBP10.33□□□□□ -0.76
SYNE1-205ENST00000367251 TSPYL6Q8N831 410 aa10.33□□□□□ -0.76
SYNE1-205ENST00000367251 PIBF1Q8WXW3 757 aa10.33□□□□□ -0.76
SYNE1-205ENST00000367251 CETN2P41208 172 aa10.33□□□□□ -0.76
SYNE1-205ENST00000367251 GIMAP6Q6P9H5 292 aa10.33□□□□□ -0.76
SYNE1-205ENST00000367251 CACNA2D4Q7Z3S7 1137 aa10.33□□□□□ -0.76
SYNE1-205ENST00000367251 XAGE3Q8WTP9 111 aa10.33□□□□□ -0.76
SYNE1-205ENST00000367251 NAA15Q9BXJ9 866 aaKnown RBP10.33□□□□□ -0.76
SYNE1-205ENST00000367251 HELLSQ9NRZ9 838 aa10.33□□□□□ -0.76
SYNE1-205ENST00000367251 KLF18A0A0U1RQI7 1052 aa10.33□□□□□ -0.76
SYNE1-205ENST00000367251 LIG1P18858 919 aa10.33□□□□□ -0.76
SYNE1-205ENST00000367251 ANO6Q4KMQ2 910 aa10.33□□□□□ -0.76
SYNE1-205ENST00000367251 MYO5CQ9NQX4 1742 aa10.33□□□□□ -0.76
SYNE1-205ENST00000367251 EXOC5O00471 708 aa10.33□□□□□ -0.76
SYNE1-205ENST00000367251 ZBTB43O43298 467 aa10.33□□□□□ -0.76
SYNE1-205ENST00000367251 BAG3O95817 575 aa10.33□□□□□ -0.76
SYNE1-205ENST00000367251 CCDC152Q4G0S7 254 aa10.33□□□□□ -0.76
SYNE1-205ENST00000367251 TSHZ3Q63HK5 1081 aa10.33□□□□□ -0.76
SYNE1-205ENST00000367251 Q6ZUG5 572 aa10.33□□□□□ -0.76
SYNE1-205ENST00000367251 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.33□□□□□ -0.76
SYNE1-205ENST00000367251 SPINK5Q9NQ38 1064 aaPredicted RBP10.33□□□□□ -0.76
SYNE1-205ENST00000367251 ARHGEF10O15013 1369 aa10.33□□□□□ -0.76
SYNE1-205ENST00000367251 MYOM2P54296 1465 aa10.32□□□□□ -0.76
SYNE1-205ENST00000367251 CALM1P0DP23 149 aa10.32□□□□□ -0.76
SYNE1-205ENST00000367251 CALM2P0DP24 149 aa10.32□□□□□ -0.76
SYNE1-205ENST00000367251 CALM3P0DP25 149 aa10.32□□□□□ -0.76
SYNE1-205ENST00000367251 GBP2P32456 591 aaPredicted RBP10.32□□□□□ -0.76
SYNE1-205ENST00000367251 CREB3L3Q68CJ9 461 aa10.32□□□□□ -0.76
SYNE1-205ENST00000367251 RGS22Q8NE09 1264 aa10.32□□□□□ -0.76
SYNE1-205ENST00000367251 ZBTB3Q9H5J0 574 aa10.32□□□□□ -0.76
SYNE1-205ENST00000367251 RNF113AO15541 343 aaKnown RBP10.32□□□□□ -0.76
SYNE1-205ENST00000367251 AK2P54819 239 aa10.32□□□□□ -0.76
SYNE1-205ENST00000367251 SSX2IPQ9Y2D8 614 aa10.32□□□□□ -0.76
SYNE1-205ENST00000367251 CEP170Q5SW79 1584 aa10.32□□□□□ -0.76
SYNE1-205ENST00000367251 SSH2Q76I76 1423 aa10.32□□□□□ -0.76
SYNE1-205ENST00000367251 CHL1O00533 1208 aa10.32□□□□□ -0.76
SYNE1-205ENST00000367251 GNAQP50148 359 aa10.32□□□□□ -0.76
SYNE1-205ENST00000367251 WTAPQ15007 396 aa10.32□□□□□ -0.76
SYNE1-205ENST00000367251 RPGRQ92834 1020 aaKnown RBP10.32□□□□□ -0.76
SYNE1-205ENST00000367251 PAG1Q9NWQ8 432 aa10.32□□□□□ -0.76
SYNE1-205ENST00000367251 TRIM35Q9UPQ4 493 aa10.32□□□□□ -0.76
SYNE1-205ENST00000367251 TNNQ9UQP3 1299 aa10.32□□□□□ -0.76
SYNE1-205ENST00000367251 RTL9Q8NET4 1388 aa10.32□□□□□ -0.76
SYNE1-205ENST00000367251 KLHL10Q6JEL2 608 aa10.32□□□□□ -0.76
SYNE1-205ENST00000367251 ZGPATQ8N5A5 531 aaKnown RBP10.32□□□□□ -0.76
SYNE1-205ENST00000367251 PHACTR3Q96KR7 559 aa10.32□□□□□ -0.76
SYNE1-205ENST00000367251 CRNKL1Q9BZJ0 848 aaKnown RBP10.32□□□□□ -0.76
SYNE1-205ENST00000367251 TTC37Q6PGP7 1564 aa10.32□□□□□ -0.76
SYNE1-205ENST00000367251 TARBP1Q13395 1621 aaKnown RBP10.32□□□□□ -0.76
SYNE1-205ENST00000367251 NBPF7P0C2Y1 421 aaPredicted RBP10.32□□□□□ -0.76
SYNE1-205ENST00000367251 ATP10AO60312 1499 aa10.32□□□□□ -0.76
SYNE1-205ENST00000367251 CLASP1Q7Z460 1538 aa10.31□□□□□ -0.76
SYNE1-205ENST00000367251 CKAP4Q07065 602 aaKnown RBP10.31□□□□□ -0.76
SYNE1-205ENST00000367251 COPS6Q7L5N1 327 aa10.31□□□□□ -0.76
SYNE1-205ENST00000367251 IP6K1Q92551 441 aa10.31□□□□□ -0.76
SYNE1-205ENST00000367251 ESR2Q92731 530 aa10.31□□□□□ -0.76
SYNE1-205ENST00000367251 LLPHQ9BRT6 129 aaKnown RBP10.31□□□□□ -0.76
SYNE1-205ENST00000367251 KAT14Q9H8E8 782 aa10.31□□□□□ -0.76
SYNE1-205ENST00000367251 TBX22Q9Y458 520 aa10.31□□□□□ -0.76
SYNE1-205ENST00000367251 PRIM1P49642 420 aaKnown RBP10.31□□□□□ -0.76
SYNE1-205ENST00000367251 CUL5Q93034 780 aa10.31□□□□□ -0.76
SYNE1-205ENST00000367251 ZNF622Q969S3 477 aaKnown RBP eCLIP10.31□□□□□ -0.76
SYNE1-205ENST00000367251 ALG1Q9BT22 464 aa10.31□□□□□ -0.76
SYNE1-205ENST00000367251 SLC26A6Q9BXS9 759 aa10.31□□□□□ -0.76
SYNE1-205ENST00000367251 TYRO3Q06418 890 aa10.31□□□□□ -0.76
SYNE1-205ENST00000367251 ATP2B3Q16720 1220 aa10.31□□□□□ -0.76
SYNE1-205ENST00000367251 MICALCLQ6ZW33 695 aa10.31□□□□□ -0.76
SYNE1-205ENST00000367251 DHX32Q7L7V1 743 aaKnown RBP10.31□□□□□ -0.76
SYNE1-205ENST00000367251 NECAB1Q8N987 351 aa10.31□□□□□ -0.76
SYNE1-205ENST00000367251 ZCRB1Q8TBF4 217 aaKnown RBP10.31□□□□□ -0.76
SYNE1-205ENST00000367251 NEO1Q92859 1461 aa10.31□□□□□ -0.76
SYNE1-205ENST00000367251 ATP5J2-PTCD1G3V325 749 aa10.31□□□□□ -0.76
SYNE1-205ENST00000367251 ABCA8O94911 1581 aa10.31□□□□□ -0.76
SYNE1-205ENST00000367251 HOXC9P31274 260 aa10.31□□□□□ -0.76
SYNE1-205ENST00000367251 UBASH3AP57075 661 aa10.31□□□□□ -0.76
SYNE1-205ENST00000367251 TRMT1LQ7Z2T5 733 aaKnown RBP10.31□□□□□ -0.76
SYNE1-205ENST00000367251 DACT1Q9NYF0 836 aa10.31□□□□□ -0.76
SYNE1-205ENST00000367251 C6orf229H3BNL8 230 aa10.31□□□□□ -0.76
SYNE1-205ENST00000367251 ZNF445P59923 1031 aa10.31□□□□□ -0.76
SYNE1-205ENST00000367251 STXBP4Q6ZWJ1 553 aa10.31□□□□□ -0.76
SYNE1-205ENST00000367251 EYA1Q99502 592 aa10.31□□□□□ -0.76
SYNE1-205ENST00000367251 MPHOSPH6Q99547 160 aaKnown RBP10.31□□□□□ -0.76
SYNE1-205ENST00000367251 RTL1A6NKG5 1358 aa10.3□□□□□ -0.76
SYNE1-205ENST00000367251 SEC24BO95487 1268 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms