RNA–Protein interactions for RNA: ENST00000366699.3

TRIM11-202, Transcript of tripartite motif containing 11, humanhuman

TSL 2 BASIC

Gene TRIM11, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-202ENST00000366699 ZNF609O15014 1411 aa20.72■□□□□ 0.91
TRIM11-202ENST00000366699 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.72■□□□□ 0.91
TRIM11-202ENST00000366699 AKAP2Q9Y2D5 859 aa20.72■□□□□ 0.91
TRIM11-202ENST00000366699 HMGB1P09429 215 aaKnown RBP20.72■□□□□ 0.91
TRIM11-202ENST00000366699 GOLIM4O00461 696 aa20.71■□□□□ 0.91
TRIM11-202ENST00000366699 TIMM10P62072 90 aa20.71■□□□□ 0.91
TRIM11-202ENST00000366699 ZNF330Q9Y3S2 320 aaPredicted RBP20.71■□□□□ 0.91
TRIM11-202ENST00000366699 KRT85P78386 507 aa20.71■□□□□ 0.91
TRIM11-202ENST00000366699 TOB2Q14106 344 aaPredicted RBP20.71■□□□□ 0.91
TRIM11-202ENST00000366699 NDUFB9Q9Y6M9 179 aa20.71■□□□□ 0.91
TRIM11-202ENST00000366699 PCCAP05165 728 aaPredicted RBP20.7■□□□□ 0.9
TRIM11-202ENST00000366699 IFIT1P09914 478 aaKnown RBP20.7■□□□□ 0.9
TRIM11-202ENST00000366699 PIGBQ92521 554 aa20.7■□□□□ 0.9
TRIM11-202ENST00000366699 BTG4Q9NY30 223 aa20.7■□□□□ 0.9
TRIM11-202ENST00000366699 A0A1B0GUL7 405 aa20.7■□□□□ 0.9
TRIM11-202ENST00000366699 PTMAP06454 111 aaKnown RBP20.7■□□□□ 0.9
TRIM11-202ENST00000366699 TERF1P54274 439 aa20.7■□□□□ 0.9
TRIM11-202ENST00000366699 LRRC24Q50LG9 513 aa20.7■□□□□ 0.9
TRIM11-202ENST00000366699 DSCC1Q9BVC3 393 aa20.7■□□□□ 0.9
TRIM11-202ENST00000366699 PLA2G12BQ9BX93 195 aa20.7■□□□□ 0.9
TRIM11-202ENST00000366699 CCDC9Q9Y3X0 531 aaKnown RBP20.7■□□□□ 0.9
TRIM11-202ENST00000366699 SHANK3Q9BYB0 1731 aa20.7■□□□□ 0.9
TRIM11-202ENST00000366699 CCDC158Q5M9N0 1113 aa20.69■□□□□ 0.9
TRIM11-202ENST00000366699 HSP90AB3PQ58FF7 597 aa20.69■□□□□ 0.9
TRIM11-202ENST00000366699 DNAJC10Q8IXB1 793 aa20.69■□□□□ 0.9
TRIM11-202ENST00000366699 ZBTB38Q8NAP3 1195 aaPredicted RBP20.69■□□□□ 0.9
TRIM11-202ENST00000366699 ZNF594Q96JF6 807 aaPredicted RBP20.69■□□□□ 0.9
TRIM11-202ENST00000366699 TCEANC2Q96MN5 208 aa20.69■□□□□ 0.9
TRIM11-202ENST00000366699 ASAP1Q9ULH1 1129 aa20.69■□□□□ 0.9
TRIM11-202ENST00000366699 TAF6LQ9Y6J9 622 aa20.69■□□□□ 0.9
TRIM11-202ENST00000366699 ELP1O95163 1332 aa20.68■□□□□ 0.9
TRIM11-202ENST00000366699 TJP1Q07157 1748 aa20.68■□□□□ 0.9
TRIM11-202ENST00000366699 COL9A3Q14050 684 aaPredicted RBP20.68■□□□□ 0.9
TRIM11-202ENST00000366699 TPRNQ4KMQ1 711 aa20.68■□□□□ 0.9
TRIM11-202ENST00000366699 TAF7LQ5H9L4 462 aa20.68■□□□□ 0.9
TRIM11-202ENST00000366699 CCDC129Q6ZRS4 1044 aa20.68■□□□□ 0.9
TRIM11-202ENST00000366699 NHSL1Q5SYE7 1610 aa20.68■□□□□ 0.9
TRIM11-202ENST00000366699 GORABQ5T7V8 394 aa20.68■□□□□ 0.9
TRIM11-202ENST00000366699 SEC62Q99442 399 aaKnown RBP20.68■□□□□ 0.9
TRIM11-202ENST00000366699 DTNBO60941 627 aa20.67■□□□□ 0.9
TRIM11-202ENST00000366699 ZMYM1Q5SVZ6 1142 aa20.67■□□□□ 0.9
TRIM11-202ENST00000366699 CYP21A2P08686 494 aa20.67■□□□□ 0.9
TRIM11-202ENST00000366699 HCLS1P14317 486 aaPredicted RBP20.67■□□□□ 0.9
TRIM11-202ENST00000366699 IFIT5Q13325 482 aaKnown RBP20.67■□□□□ 0.9
TRIM11-202ENST00000366699 CDC37L1Q7L3B6 337 aa20.67■□□□□ 0.9
TRIM11-202ENST00000366699 MAP3K15Q6ZN16 1313 aa20.67■□□□□ 0.9
TRIM11-202ENST00000366699 RNF113AO15541 343 aaKnown RBP20.66■□□□□ 0.9
TRIM11-202ENST00000366699 GIGYF2Q6Y7W6 1299 aaKnown RBP20.66■□□□□ 0.9
TRIM11-202ENST00000366699 FUCA2Q9BTY2 467 aa20.66■□□□□ 0.9
TRIM11-202ENST00000366699 FGD1P98174 961 aa20.66■□□□□ 0.9
TRIM11-202ENST00000366699 CSF1RP07333 972 aa20.65■□□□□ 0.9
TRIM11-202ENST00000366699 TTC39AQ5SRH9 613 aa20.65■□□□□ 0.9
TRIM11-202ENST00000366699 SCAND2PQ9GZW5 306 aaPredicted RBP20.65■□□□□ 0.9
TRIM11-202ENST00000366699 HSP90B1P14625 803 aaKnown RBP20.65■□□□□ 0.9
TRIM11-202ENST00000366699 GIMAP6Q6P9H5 292 aa20.65■□□□□ 0.9
TRIM11-202ENST00000366699 GTF3C6Q969F1 213 aa20.65■□□□□ 0.9
TRIM11-202ENST00000366699 PUS3Q9BZE2 481 aaKnown RBP20.65■□□□□ 0.9
TRIM11-202ENST00000366699 USP25Q9UHP3 1055 aa20.65■□□□□ 0.9
TRIM11-202ENST00000366699 CDHR2Q9BYE9 1310 aa20.65■□□□□ 0.9
TRIM11-202ENST00000366699 ZFYP08048 801 aaPredicted RBP20.64■□□□□ 0.9
TRIM11-202ENST00000366699 Q6ZUG5 572 aa20.64■□□□□ 0.9
TRIM11-202ENST00000366699 TTC6Q86TZ1 520 aa20.64■□□□□ 0.9
TRIM11-202ENST00000366699 FERMT3Q86UX7 667 aa20.64■□□□□ 0.9
TRIM11-202ENST00000366699 CHMP4CQ96CF2 233 aa20.64■□□□□ 0.9
TRIM11-202ENST00000366699 FAM89AQ96GI7 184 aa20.64■□□□□ 0.9
TRIM11-202ENST00000366699 TOGARAM1Q9Y4F4 1720 aa20.64■□□□□ 0.89
TRIM11-202ENST00000366699 STK3Q13188 491 aa20.63■□□□□ 0.89
TRIM11-202ENST00000366699 DHX32Q7L7V1 743 aaKnown RBP20.63■□□□□ 0.89
TRIM11-202ENST00000366699 EXOC5O00471 708 aa20.63■□□□□ 0.89
TRIM11-202ENST00000366699 KDM4AO75164 1064 aa20.63■□□□□ 0.89
TRIM11-202ENST00000366699 ABCC12Q96J65 1359 aa20.63■□□□□ 0.89
TRIM11-202ENST00000366699 SPEF2Q9C093 1822 aa20.62■□□□□ 0.89
TRIM11-202ENST00000366699 ADCY5O95622 1261 aa20.62■□□□□ 0.89
TRIM11-202ENST00000366699 CHGBP05060 677 aa20.62■□□□□ 0.89
TRIM11-202ENST00000366699 CCDC192P0DO97 292 aa20.62■□□□□ 0.89
TRIM11-202ENST00000366699 LLPHQ9BRT6 129 aaKnown RBP20.62■□□□□ 0.89
TRIM11-202ENST00000366699 FKBP4Q02790 459 aaKnown RBP eCLIP20.62■□□□□ 0.89
TRIM11-202ENST00000366699 XAGE2Q96GT9 111 aa20.62■□□□□ 0.89
TRIM11-202ENST00000366699 LAMA4Q16363 1823 aa20.62■□□□□ 0.89
TRIM11-202ENST00000366699 DISP2A7MBM2 1401 aa20.62■□□□□ 0.89
TRIM11-202ENST00000366699 HSPD1P10809 573 aaKnown RBP20.61■□□□□ 0.89
TRIM11-202ENST00000366699 CTNNA3Q9UI47 895 aa20.61■□□□□ 0.89
TRIM11-202ENST00000366699 KIF3AQ9Y496 699 aa20.61■□□□□ 0.89
TRIM11-202ENST00000366699 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.61■□□□□ 0.89
TRIM11-202ENST00000366699 BCL9O00512 1426 aa20.61■□□□□ 0.89
TRIM11-202ENST00000366699 KIAA2012Q0VF49 1180 aa20.61■□□□□ 0.89
TRIM11-202ENST00000366699 GOLGA6L4A6NEF3 574 aa20.6■□□□□ 0.89
TRIM11-202ENST00000366699 MAST3O60307 1309 aa20.6■□□□□ 0.89
TRIM11-202ENST00000366699 CYP19A1P11511 503 aaPredicted RBP20.6■□□□□ 0.89
TRIM11-202ENST00000366699 NLRP10Q86W26 655 aa20.6■□□□□ 0.89
TRIM11-202ENST00000366699 SPATA32Q96LK8 384 aa20.6■□□□□ 0.89
TRIM11-202ENST00000366699 RRP9O43818 475 aaKnown RBP20.6■□□□□ 0.89
TRIM11-202ENST00000366699 BRF1Q92994 677 aa20.6■□□□□ 0.89
TRIM11-202ENST00000366699 FAM173BQ6P4H8 233 aa20.59■□□□□ 0.89
TRIM11-202ENST00000366699 NUP62CLQ9H1M0 184 aa20.59■□□□□ 0.89
TRIM11-202ENST00000366699 R3HCC1Q9Y3T6 440 aaKnown RBP20.59■□□□□ 0.89
TRIM11-202ENST00000366699 COL14A1Q05707 1796 aaKnown RBP20.59■□□□□ 0.89
TRIM11-202ENST00000366699 ANKRD18BA2A2Z9 1011 aa20.59■□□□□ 0.89
TRIM11-202ENST00000366699 MAP3K11Q16584 847 aa20.59■□□□□ 0.89
TRIM11-202ENST00000366699 ERVV-1B6SEH8 477 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms