RNA–Protein interactions for RNA: ENST00000366197.9

ZNF548-202, Transcript of zinc finger protein 548, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF548, Length 4,955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-202ENST00000366197 TTC41PQ6P2S7 1318 aa11.85□□□□□ -0.51
ZNF548-202ENST00000366197 CCDC66A2RUB6 948 aa11.85□□□□□ -0.51
ZNF548-202ENST00000366197 EZRP15311 586 aaKnown RBP11.85□□□□□ -0.51
ZNF548-202ENST00000366197 PAFAH1B1P43034 410 aa11.85□□□□□ -0.51
ZNF548-202ENST00000366197 RBM10P98175 930 aaKnown RBP11.85□□□□□ -0.51
ZNF548-202ENST00000366197 CDCA7Q9BWT1 371 aaPredicted RBP11.85□□□□□ -0.51
ZNF548-202ENST00000366197 GBP3Q9H0R5 595 aa11.85□□□□□ -0.51
ZNF548-202ENST00000366197 DCTPP1Q9H773 170 aa11.85□□□□□ -0.51
ZNF548-202ENST00000366197 USP25Q9UHP3 1055 aa11.85□□□□□ -0.51
ZNF548-202ENST00000366197 SOS1Q07889 1333 aaPredicted RBP11.85□□□□□ -0.51
ZNF548-202ENST00000366197 PICALMQ13492 652 aa11.85□□□□□ -0.51
ZNF548-202ENST00000366197 STX1AQ16623 288 aa11.85□□□□□ -0.51
ZNF548-202ENST00000366197 GNAT2P19087 354 aa11.85□□□□□ -0.51
ZNF548-202ENST00000366197 POLD1P28340 1107 aa11.85□□□□□ -0.51
ZNF548-202ENST00000366197 FAM193AP78312 1265 aa11.84□□□□□ -0.51
ZNF548-202ENST00000366197 ORAI2Q96SN7 254 aa11.84□□□□□ -0.51
ZNF548-202ENST00000366197 MAGEB6P1A0A0J9YX57 407 aa11.84□□□□□ -0.51
ZNF548-202ENST00000366197 TBCAO75347 108 aaKnown RBP11.84□□□□□ -0.51
ZNF548-202ENST00000366197 URI1O94763 535 aaPredicted RBP11.84□□□□□ -0.51
ZNF548-202ENST00000366197 USP8P40818 1118 aa11.84□□□□□ -0.51
ZNF548-202ENST00000366197 FAM114A1Q8IWE2 563 aa11.84□□□□□ -0.51
ZNF548-202ENST00000366197 EYA3Q99504 573 aa11.84□□□□□ -0.51
ZNF548-202ENST00000366197 CRACR2AQ9BSW2 395 aa11.84□□□□□ -0.51
ZNF548-202ENST00000366197 ANKRD2Q9GZV1 360 aa11.84□□□□□ -0.51
ZNF548-202ENST00000366197 RBM27Q9P2N5 1060 aaKnown RBP11.84□□□□□ -0.51
ZNF548-202ENST00000366197 A0A1W2PP64 1363 aa11.84□□□□□ -0.51
ZNF548-202ENST00000366197 SYKP43405 635 aa11.84□□□□□ -0.51
ZNF548-202ENST00000366197 GBP2P32456 591 aaPredicted RBP11.84□□□□□ -0.51
ZNF548-202ENST00000366197 TAF3Q5VWG9 929 aa11.84□□□□□ -0.51
ZNF548-202ENST00000366197 MCM9Q9NXL9 1143 aa11.84□□□□□ -0.51
ZNF548-202ENST00000366197 NEMFO60524 1076 aa11.83□□□□□ -0.52
ZNF548-202ENST00000366197 ZSCAN22P10073 491 aaPredicted RBP11.83□□□□□ -0.52
ZNF548-202ENST00000366197 LUZP1Q86V48 1076 aa11.83□□□□□ -0.52
ZNF548-202ENST00000366197 C16orf71Q8IYS4 520 aaPredicted RBP11.83□□□□□ -0.52
ZNF548-202ENST00000366197 TMEM87AQ8NBN3 555 aa11.83□□□□□ -0.52
ZNF548-202ENST00000366197 CCDC102AQ96A19 550 aa11.83□□□□□ -0.52
ZNF548-202ENST00000366197 YTHDC2Q9H6S0 1430 aaKnown RBP11.83□□□□□ -0.52
ZNF548-202ENST00000366197 GSDMDP57764 484 aa11.83□□□□□ -0.52
ZNF548-202ENST00000366197 CEP85Q6P2H3 762 aa11.83□□□□□ -0.52
ZNF548-202ENST00000366197 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.83□□□□□ -0.52
ZNF548-202ENST00000366197 MACROD2A1Z1Q3 448 aa11.83□□□□□ -0.52
ZNF548-202ENST00000366197 TRAPPC3LQ5T215 181 aa11.83□□□□□ -0.52
ZNF548-202ENST00000366197 KCNG4Q8TDN1 519 aa11.83□□□□□ -0.52
ZNF548-202ENST00000366197 ABCC1P33527 1531 aa11.83□□□□□ -0.52
ZNF548-202ENST00000366197 ZFYVE9O95405 1425 aa11.83□□□□□ -0.52
ZNF548-202ENST00000366197 GNPATO15228 680 aa11.82□□□□□ -0.52
ZNF548-202ENST00000366197 RNF113AO15541 343 aaKnown RBP11.82□□□□□ -0.52
ZNF548-202ENST00000366197 PRC1O43663 620 aa11.82□□□□□ -0.52
ZNF548-202ENST00000366197 KIAA0754O94854 1291 aa11.82□□□□□ -0.52
ZNF548-202ENST00000366197 ZNF790Q6PG37 636 aa11.82□□□□□ -0.52
ZNF548-202ENST00000366197 CCDC174Q6PII3 467 aa11.82□□□□□ -0.52
ZNF548-202ENST00000366197 Q6ZUG5 572 aa11.82□□□□□ -0.52
ZNF548-202ENST00000366197 HEATR3Q7Z4Q2 680 aa11.82□□□□□ -0.52
ZNF548-202ENST00000366197 VEZTQ9HBM0 779 aa11.82□□□□□ -0.52
ZNF548-202ENST00000366197 ITSN2Q9NZM3 1697 aa11.82□□□□□ -0.52
ZNF548-202ENST00000366197 UQCRHLA0A096LP55 91 aa11.82□□□□□ -0.52
ZNF548-202ENST00000366197 GOLGA6L7A0A1B0GV03 622 aa11.82□□□□□ -0.52
ZNF548-202ENST00000366197 UQCRHP07919 91 aa11.82□□□□□ -0.52
ZNF548-202ENST00000366197 NMIQ13287 307 aaPredicted RBP11.82□□□□□ -0.52
ZNF548-202ENST00000366197 PBRM1Q86U86 1689 aa11.82□□□□□ -0.52
ZNF548-202ENST00000366197 ISM2Q6H9L7 571 aa11.82□□□□□ -0.52
ZNF548-202ENST00000366197 CLEC11AQ9Y240 323 aa11.82□□□□□ -0.52
ZNF548-202ENST00000366197 GSTTP1A0A1W2PQM5 241 aa11.82□□□□□ -0.52
ZNF548-202ENST00000366197 LDHBP07195 334 aaKnown RBP11.82□□□□□ -0.52
ZNF548-202ENST00000366197 CALM1P0DP23 149 aa11.82□□□□□ -0.52
ZNF548-202ENST00000366197 CALM2P0DP24 149 aa11.82□□□□□ -0.52
ZNF548-202ENST00000366197 CALM3P0DP25 149 aa11.82□□□□□ -0.52
ZNF548-202ENST00000366197 NF2P35240 595 aa11.82□□□□□ -0.52
ZNF548-202ENST00000366197 NAPAP54920 295 aa11.82□□□□□ -0.52
ZNF548-202ENST00000366197 RMND1Q9NWS8 449 aa11.82□□□□□ -0.52
ZNF548-202ENST00000366197 YEATS2Q9ULM3 1422 aa11.82□□□□□ -0.52
ZNF548-202ENST00000366197 SH3TC1Q8TE82 1336 aa11.82□□□□□ -0.52
ZNF548-202ENST00000366197 N4BP3O15049 544 aa11.81□□□□□ -0.52
ZNF548-202ENST00000366197 DNA2P51530 1060 aa11.81□□□□□ -0.52
ZNF548-202ENST00000366197 TRIM47Q96LD4 638 aa11.81□□□□□ -0.52
ZNF548-202ENST00000366197 USP21Q9UK80 565 aa11.81□□□□□ -0.52
ZNF548-202ENST00000366197 CALML3P27482 149 aa11.81□□□□□ -0.52
ZNF548-202ENST00000366197 TFCP2Q12800 502 aa11.81□□□□□ -0.52
ZNF548-202ENST00000366197 PARP10Q53GL7 1025 aa11.81□□□□□ -0.52
ZNF548-202ENST00000366197 TMCO3Q6UWJ1 677 aa11.81□□□□□ -0.52
ZNF548-202ENST00000366197 MIGA1Q8NAN2 632 aa11.81□□□□□ -0.52
ZNF548-202ENST00000366197 FAM89AQ96GI7 184 aa11.81□□□□□ -0.52
ZNF548-202ENST00000366197 EXOC1Q9NV70 894 aa11.81□□□□□ -0.52
ZNF548-202ENST00000366197 BABAM1Q9NWV8 329 aa11.81□□□□□ -0.52
ZNF548-202ENST00000366197 WWC3Q9ULE0 1092 aa11.81□□□□□ -0.52
ZNF548-202ENST00000366197 KLHL40Q2TBA0 621 aa11.81□□□□□ -0.52
ZNF548-202ENST00000366197 TMC6Q7Z403 805 aa11.81□□□□□ -0.52
ZNF548-202ENST00000366197 SMARCC2Q8TAQ2 1214 aa11.81□□□□□ -0.52
ZNF548-202ENST00000366197 ZBTB40Q9NUA8 1239 aa11.81□□□□□ -0.52
ZNF548-202ENST00000366197 CTNNBL1Q8WYA6 563 aaPredicted RBP11.8□□□□□ -0.52
ZNF548-202ENST00000366197 C6orf50Q9HD87 102 aa11.8□□□□□ -0.52
ZNF548-202ENST00000366197 ZFYVE16Q7Z3T8 1539 aa11.8□□□□□ -0.52
ZNF548-202ENST00000366197 TRIM75PA6NK02 468 aa11.8□□□□□ -0.52
ZNF548-202ENST00000366197 RBM26Q5T8P6 1007 aaKnown RBP11.8□□□□□ -0.52
ZNF548-202ENST00000366197 MAGEB6Q8N7X4 407 aa11.8□□□□□ -0.52
ZNF548-202ENST00000366197 ABCA5Q8WWZ7 1642 aa11.8□□□□□ -0.52
ZNF548-202ENST00000366197 SBNO2Q9Y2G9 1366 aa11.8□□□□□ -0.52
ZNF548-202ENST00000366197 RIMBP2O15034 1052 aa11.8□□□□□ -0.52
ZNF548-202ENST00000366197 USP37Q86T82 979 aa11.8□□□□□ -0.52
ZNF548-202ENST00000366197 B4DLN1 442 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms