RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 MYH16Q9H6N6 1097 aa17.49■□□□□ 0.39
TNFRSF1A-202ENST00000366159 CNTNAP1P78357 1384 aa17.49■□□□□ 0.39
TNFRSF1A-202ENST00000366159 RIMBP2O15034 1052 aa17.48■□□□□ 0.39
TNFRSF1A-202ENST00000366159 HIRAP54198 1017 aaPredicted RBP17.48■□□□□ 0.39
TNFRSF1A-202ENST00000366159 ANKRD18AQ8IVF6 992 aa17.48■□□□□ 0.39
TNFRSF1A-202ENST00000366159 DPF2Q92785 391 aa17.48■□□□□ 0.39
TNFRSF1A-202ENST00000366159 GPR101Q96P66 508 aaPredicted RBP17.48■□□□□ 0.39
TNFRSF1A-202ENST00000366159 GREM2Q9H772 168 aa17.48■□□□□ 0.39
TNFRSF1A-202ENST00000366159 DBNDD1Q9H9R9 158 aa17.48■□□□□ 0.39
TNFRSF1A-202ENST00000366159 KCNQ5Q9NR82 932 aa17.48■□□□□ 0.39
TNFRSF1A-202ENST00000366159 PSMD14O00487 310 aa17.47■□□□□ 0.39
TNFRSF1A-202ENST00000366159 CSF1RP07333 972 aa17.47■□□□□ 0.39
TNFRSF1A-202ENST00000366159 UBE3BQ7Z3V4 1068 aa17.47■□□□□ 0.39
TNFRSF1A-202ENST00000366159 BSDC1Q9NW68 430 aaPredicted RBP17.47■□□□□ 0.39
TNFRSF1A-202ENST00000366159 SCN9AQ15858 1988 aa17.47■□□□□ 0.39
TNFRSF1A-202ENST00000366159 SHTN1A0MZ66 631 aa17.47■□□□□ 0.39
TNFRSF1A-202ENST00000366159 ECE2O60344 883 aa17.47■□□□□ 0.39
TNFRSF1A-202ENST00000366159 FMR1Q06787 632 aaKnown RBP eCLIP17.47■□□□□ 0.39
TNFRSF1A-202ENST00000366159 BEND3Q5T5X7 828 aa17.47■□□□□ 0.39
TNFRSF1A-202ENST00000366159 CDC5LQ99459 802 aaKnown RBP17.47■□□□□ 0.39
TNFRSF1A-202ENST00000366159 ZC3H12CQ9C0D7 883 aaKnown RBP17.47■□□□□ 0.39
TNFRSF1A-202ENST00000366159 ANKIB1Q9P2G1 1089 aa17.47■□□□□ 0.39
TNFRSF1A-202ENST00000366159 MKRN1Q9UHC7 482 aaKnown RBP17.47■□□□□ 0.39
TNFRSF1A-202ENST00000366159 CNOT7Q9UIV1 285 aaKnown RBP17.47■□□□□ 0.39
TNFRSF1A-202ENST00000366159 GGA1Q9UJY5 639 aa17.47■□□□□ 0.39
TNFRSF1A-202ENST00000366159 ZBTB12Q9Y330 459 aaPredicted RBP17.47■□□□□ 0.39
TNFRSF1A-202ENST00000366159 UFL1O94874 794 aa17.46■□□□□ 0.38
TNFRSF1A-202ENST00000366159 DOK7Q18PE1 504 aa17.46■□□□□ 0.38
TNFRSF1A-202ENST00000366159 ZC3H15Q8WU90 426 aaKnown RBP17.46■□□□□ 0.38
TNFRSF1A-202ENST00000366159 BCL2L13Q9BXK5 485 aa17.46■□□□□ 0.38
TNFRSF1A-202ENST00000366159 MINPP1Q9UNW1 487 aa17.46■□□□□ 0.38
TNFRSF1A-202ENST00000366159 XDHP47989 1333 aa17.45■□□□□ 0.38
TNFRSF1A-202ENST00000366159 WTIPA6NIX2 430 aaPredicted RBP17.45■□□□□ 0.38
TNFRSF1A-202ENST00000366159 RASSF10A6NK89 507 aa17.45■□□□□ 0.38
TNFRSF1A-202ENST00000366159 F6X3S4 739 aa17.45■□□□□ 0.38
TNFRSF1A-202ENST00000366159 VIL1P09327 827 aaKnown RBP17.45■□□□□ 0.38
TNFRSF1A-202ENST00000366159 IFFO2Q5TF58 517 aa17.45■□□□□ 0.38
TNFRSF1A-202ENST00000366159 CST9Q5W186 159 aa17.45■□□□□ 0.38
TNFRSF1A-202ENST00000366159 ATP2B4P23634 1241 aa17.44■□□□□ 0.38
TNFRSF1A-202ENST00000366159 RPS12P25398 132 aaKnown RBP17.44■□□□□ 0.38
TNFRSF1A-202ENST00000366159 MICALL2Q8IY33 904 aa17.44■□□□□ 0.38
TNFRSF1A-202ENST00000366159 TRPM4Q8TD43 1214 aa17.44■□□□□ 0.38
TNFRSF1A-202ENST00000366159 ZNF609O15014 1411 aa17.43■□□□□ 0.38
TNFRSF1A-202ENST00000366159 PSME4Q14997 1843 aa17.43■□□□□ 0.38
TNFRSF1A-202ENST00000366159 TRAF5O00463 557 aa17.43■□□□□ 0.38
TNFRSF1A-202ENST00000366159 HSPA1AP0DMV8 641 aaKnown RBP17.43■□□□□ 0.38
TNFRSF1A-202ENST00000366159 HSPA1BP0DMV9 641 aaKnown RBP17.43■□□□□ 0.38
TNFRSF1A-202ENST00000366159 VEGFBP49765 207 aa17.43■□□□□ 0.38
TNFRSF1A-202ENST00000366159 SPEF2Q9C093 1822 aa17.43■□□□□ 0.38
TNFRSF1A-202ENST00000366159 TRPM7Q96QT4 1865 aa17.43■□□□□ 0.38
TNFRSF1A-202ENST00000366159 H7C1D1 291 aa17.42■□□□□ 0.38
TNFRSF1A-202ENST00000366159 EGFRP00533 1210 aa17.42■□□□□ 0.38
TNFRSF1A-202ENST00000366159 ITGA6P23229 1130 aa17.42■□□□□ 0.38
TNFRSF1A-202ENST00000366159 FOXO4P98177 505 aa17.42■□□□□ 0.38
TNFRSF1A-202ENST00000366159 DEFB115Q30KQ5 88 aa17.42■□□□□ 0.38
TNFRSF1A-202ENST00000366159 MED23Q9ULK4 1368 aa17.41■□□□□ 0.38
TNFRSF1A-202ENST00000366159 FAM161AQ3B820 660 aa17.41■□□□□ 0.38
TNFRSF1A-202ENST00000366159 SAMD7Q7Z3H4 446 aa17.41■□□□□ 0.38
TNFRSF1A-202ENST00000366159 GMLQ99445 158 aa17.41■□□□□ 0.38
TNFRSF1A-202ENST00000366159 ZNF646O15015 1829 aaPredicted RBP17.4■□□□□ 0.38
TNFRSF1A-202ENST00000366159 CCT4P50991 539 aaKnown RBP17.4■□□□□ 0.38
TNFRSF1A-202ENST00000366159 COL13A1Q5TAT6 717 aaPredicted RBP17.4■□□□□ 0.38
TNFRSF1A-202ENST00000366159 PODNQ7Z5L7 613 aa17.4■□□□□ 0.38
TNFRSF1A-202ENST00000366159 GLIS2Q9BZE0 524 aaPredicted RBP17.4■□□□□ 0.38
TNFRSF1A-202ENST00000366159 E9PSI1 815 aa17.39■□□□□ 0.37
TNFRSF1A-202ENST00000366159 IGHMBP2P38935 993 aaKnown RBP17.39■□□□□ 0.37
TNFRSF1A-202ENST00000366159 SLFN5Q08AF3 891 aa17.39■□□□□ 0.37
TNFRSF1A-202ENST00000366159 CDC37L1Q7L3B6 337 aa17.39■□□□□ 0.37
TNFRSF1A-202ENST00000366159 LEMD3Q9Y2U8 911 aa17.39■□□□□ 0.37
TNFRSF1A-202ENST00000366159 TLL2Q9Y6L7 1015 aa17.39■□□□□ 0.37
TNFRSF1A-202ENST00000366159 ALDH1L1O75891 902 aa17.38■□□□□ 0.37
TNFRSF1A-202ENST00000366159 ZNF280AP59817 542 aaPredicted RBP17.38■□□□□ 0.37
TNFRSF1A-202ENST00000366159 TBC1D10BQ4KMP7 808 aaPredicted RBP17.38■□□□□ 0.37
TNFRSF1A-202ENST00000366159 EPHA10Q5JZY3 1008 aa17.38■□□□□ 0.37
TNFRSF1A-202ENST00000366159 RSBN1LQ6PCB5 846 aaPredicted RBP17.38■□□□□ 0.37
TNFRSF1A-202ENST00000366159 TXNRD3Q86VQ6 643 aa17.38■□□□□ 0.37
TNFRSF1A-202ENST00000366159 TRMT2AQ8IZ69 625 aaKnown RBP17.38■□□□□ 0.37
TNFRSF1A-202ENST00000366159 MRPL50Q8N5N7 158 aaKnown RBP17.38■□□□□ 0.37
TNFRSF1A-202ENST00000366159 AGBL3Q8NEM8 1001 aa17.38■□□□□ 0.37
TNFRSF1A-202ENST00000366159 WDR33Q9C0J8 1336 aaKnown RBP17.37■□□□□ 0.37
TNFRSF1A-202ENST00000366159 IRS2Q9Y4H2 1338 aa17.37■□□□□ 0.37
TNFRSF1A-202ENST00000366159 CCER2I3L3R5 266 aa17.37■□□□□ 0.37
TNFRSF1A-202ENST00000366159 GRM8O00222 908 aa17.37■□□□□ 0.37
TNFRSF1A-202ENST00000366159 ABT1Q9ULW3 272 aaKnown RBP17.37■□□□□ 0.37
TNFRSF1A-202ENST00000366159 THSD7BQ9C0I4 1608 aa17.37■□□□□ 0.37
TNFRSF1A-202ENST00000366159 UTYO14607 1347 aa17.36■□□□□ 0.37
TNFRSF1A-202ENST00000366159 ANKRD18BA2A2Z9 1011 aa17.36■□□□□ 0.37
TNFRSF1A-202ENST00000366159 USP17L3A6NCW0 530 aa17.36■□□□□ 0.37
TNFRSF1A-202ENST00000366159 USP17L4A6NCW7 530 aa17.36■□□□□ 0.37
TNFRSF1A-202ENST00000366159 G3V3G9 751 aa17.36■□□□□ 0.37
TNFRSF1A-202ENST00000366159 DCAF8Q5TAQ9 597 aa17.36■□□□□ 0.37
TNFRSF1A-202ENST00000366159 USP17L1Q7RTZ2 530 aa17.36■□□□□ 0.37
TNFRSF1A-202ENST00000366159 SAPCD2Q86UD0 394 aa17.36■□□□□ 0.37
TNFRSF1A-202ENST00000366159 KAZALD1Q96I82 304 aa17.36■□□□□ 0.37
TNFRSF1A-202ENST00000366159 MPHOSPH8Q99549 860 aa17.36■□□□□ 0.37
TNFRSF1A-202ENST00000366159 ANKRD2Q9GZV1 360 aa17.36■□□□□ 0.37
TNFRSF1A-202ENST00000366159 WBP1LQ9NX94 342 aa17.36■□□□□ 0.37
TNFRSF1A-202ENST00000366159 ZNF804BA4D1E1 1349 aa17.35■□□□□ 0.37
TNFRSF1A-202ENST00000366159 CELF2O95319 508 aaKnown RBP17.35■□□□□ 0.37
TNFRSF1A-202ENST00000366159 CHRNDQ07001 517 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms