RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 RPAP2Q8IXW5 612 aaPredicted RBP14.95□□□□□ -0.02
SRGAP3-201ENST00000360413 RAB3IPQ96QF0 476 aaPredicted RBP14.95□□□□□ -0.02
SRGAP3-201ENST00000360413 ABCF2Q9UG63 623 aa14.95□□□□□ -0.02
SRGAP3-201ENST00000360413 CCDC102BQ68D86 513 aa14.94□□□□□ -0.02
SRGAP3-201ENST00000360413 PRDM11Q9NQV5 511 aa14.94□□□□□ -0.02
SRGAP3-201ENST00000360413 PRIM1P49642 420 aaKnown RBP14.94□□□□□ -0.02
SRGAP3-201ENST00000360413 RPAINQ86UA6 219 aa14.94□□□□□ -0.02
SRGAP3-201ENST00000360413 CCDC170Q8IYT3 715 aa14.94□□□□□ -0.02
SRGAP3-201ENST00000360413 CCT2P78371 535 aaKnown RBP14.94□□□□□ -0.02
SRGAP3-201ENST00000360413 SMARCA5O60264 1052 aaPredicted RBP14.94□□□□□ -0.02
SRGAP3-201ENST00000360413 CABP5Q9NP86 173 aa14.94□□□□□ -0.02
SRGAP3-201ENST00000360413 ARHGAP25P42331 645 aa14.94□□□□□ -0.02
SRGAP3-201ENST00000360413 NBPF7P0C2Y1 421 aaPredicted RBP14.94□□□□□ -0.02
SRGAP3-201ENST00000360413 SYT10Q6XYQ8 523 aa14.94□□□□□ -0.02
SRGAP3-201ENST00000360413 BICD1Q96G01 975 aa14.94□□□□□ -0.02
SRGAP3-201ENST00000360413 SMARCA4P51532 1647 aa14.94□□□□□ -0.02
SRGAP3-201ENST00000360413 WDR78Q5VTH9 848 aa14.94□□□□□ -0.02
SRGAP3-201ENST00000360413 DHX29Q7Z478 1369 aaKnown RBP14.93□□□□□ -0.02
SRGAP3-201ENST00000360413 GOLGA8BA8MQT2 603 aa14.93□□□□□ -0.02
SRGAP3-201ENST00000360413 KRT86O43790 486 aa14.93□□□□□ -0.02
SRGAP3-201ENST00000360413 HPDP32754 393 aaPredicted RBP14.93□□□□□ -0.02
SRGAP3-201ENST00000360413 UBLCP1Q8WVY7 318 aaPredicted RBP14.93□□□□□ -0.02
SRGAP3-201ENST00000360413 TBC1D32Q96NH3 1257 aa14.93□□□□□ -0.02
SRGAP3-201ENST00000360413 HSP90AA4PQ58FG1 418 aa14.93□□□□□ -0.02
SRGAP3-201ENST00000360413 ZNF365Q70YC5 407 aa14.93□□□□□ -0.02
SRGAP3-201ENST00000360413 ATP5DP30049 168 aa14.93□□□□□ -0.02
SRGAP3-201ENST00000360413 CCDC38Q502W7 563 aa14.93□□□□□ -0.02
SRGAP3-201ENST00000360413 CCDC144CPQ8IYA2 1237 aa14.93□□□□□ -0.02
SRGAP3-201ENST00000360413 TRIM47Q96LD4 638 aa14.93□□□□□ -0.02
SRGAP3-201ENST00000360413 AMOTQ4VCS5 1084 aa14.93□□□□□ -0.02
SRGAP3-201ENST00000360413 DDX27Q96GQ7 796 aaKnown RBP14.93□□□□□ -0.02
SRGAP3-201ENST00000360413 SLC52A1Q9NWF4 448 aa14.93□□□□□ -0.02
SRGAP3-201ENST00000360413 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.93□□□□□ -0.02
SRGAP3-201ENST00000360413 BICDL1Q6ZP65 573 aa14.93□□□□□ -0.02
SRGAP3-201ENST00000360413 SPINK5Q9NQ38 1064 aaPredicted RBP14.93□□□□□ -0.02
SRGAP3-201ENST00000360413 IFIT5Q13325 482 aaKnown RBP14.92□□□□□ -0.02
SRGAP3-201ENST00000360413 AOPEPQ8N6M6 819 aa14.92□□□□□ -0.02
SRGAP3-201ENST00000360413 TBC1D31Q96DN5 1066 aa14.92□□□□□ -0.02
SRGAP3-201ENST00000360413 PPP2R3AQ06190 1150 aa14.92□□□□□ -0.02
SRGAP3-201ENST00000360413 GSTA5Q7RTV2 222 aa14.92□□□□□ -0.02
SRGAP3-201ENST00000360413 HDAC9Q9UKV0 1011 aa14.92□□□□□ -0.02
SRGAP3-201ENST00000360413 EPRSP07814 1512 aaKnown RBP14.92□□□□□ -0.02
SRGAP3-201ENST00000360413 SAMM50Q9Y512 469 aa14.92□□□□□ -0.02
SRGAP3-201ENST00000360413 UBA7P41226 1012 aa14.92□□□□□ -0.02
SRGAP3-201ENST00000360413 WHAMMQ8TF30 809 aa14.92□□□□□ -0.02
SRGAP3-201ENST00000360413 EXOC1Q9NV70 894 aa14.92□□□□□ -0.02
SRGAP3-201ENST00000360413 NKTRP30414 1462 aaKnown RBP14.92□□□□□ -0.02
SRGAP3-201ENST00000360413 SYKP43405 635 aa14.92□□□□□ -0.02
SRGAP3-201ENST00000360413 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.92□□□□□ -0.02
SRGAP3-201ENST00000360413 CNPY2Q9Y2B0 182 aa14.92□□□□□ -0.02
SRGAP3-201ENST00000360413 DIXDC1Q155Q3 683 aa14.92□□□□□ -0.02
SRGAP3-201ENST00000360413 USP48Q86UV5 1035 aa14.92□□□□□ -0.02
SRGAP3-201ENST00000360413 LRPPRCP42704 1394 aaKnown RBP14.92□□□□□ -0.02
SRGAP3-201ENST00000360413 ANKRD50Q9ULJ7 1429 aa14.92□□□□□ -0.02
SRGAP3-201ENST00000360413 EPSTI1Q96J88 318 aa14.92□□□□□ -0.02
SRGAP3-201ENST00000360413 TSPYL2Q9H2G4 693 aaPredicted RBP14.92□□□□□ -0.02
SRGAP3-201ENST00000360413 LZTFL1Q9NQ48 299 aa14.92□□□□□ -0.02
SRGAP3-201ENST00000360413 CADPSQ9ULU8 1353 aa14.92□□□□□ -0.02
SRGAP3-201ENST00000360413 GAPVD1Q14C86 1478 aa14.91□□□□□ -0.02
SRGAP3-201ENST00000360413 MYL6BP14649 208 aa14.91□□□□□ -0.02
SRGAP3-201ENST00000360413 ATP6V1AP38606 617 aa14.91□□□□□ -0.02
SRGAP3-201ENST00000360413 EVCP57679 992 aa14.91□□□□□ -0.02
SRGAP3-201ENST00000360413 KRT83P78385 493 aa14.91□□□□□ -0.02
SRGAP3-201ENST00000360413 A6NNZ2 444 aa14.91□□□□□ -0.02
SRGAP3-201ENST00000360413 TUBB8Q3ZCM7 444 aa14.91□□□□□ -0.02
SRGAP3-201ENST00000360413 ERO1AQ96HE7 468 aa14.91□□□□□ -0.02
SRGAP3-201ENST00000360413 ZSCAN22P10073 491 aaPredicted RBP14.91□□□□□ -0.02
SRGAP3-201ENST00000360413 ZNF569Q5MCW4 686 aa14.91□□□□□ -0.02
SRGAP3-201ENST00000360413 MICAL1Q8TDZ2 1067 aa14.91□□□□□ -0.02
SRGAP3-201ENST00000360413 ZSCAN16Q9H4T2 348 aaPredicted RBP14.91□□□□□ -0.02
SRGAP3-201ENST00000360413 TLDC2A0PJX2 215 aa14.91□□□□□ -0.02
SRGAP3-201ENST00000360413 GOLGA6CA6NDK9 693 aa14.91□□□□□ -0.02
SRGAP3-201ENST00000360413 ZNF213O14771 459 aa14.91□□□□□ -0.02
SRGAP3-201ENST00000360413 GOLGA6DP0CG33 693 aa14.91□□□□□ -0.02
SRGAP3-201ENST00000360413 CFAP157Q5JU67 520 aa14.91□□□□□ -0.02
SRGAP3-201ENST00000360413 TBC1D9Q6ZT07 1266 aa14.91□□□□□ -0.02
SRGAP3-201ENST00000360413 TEX13AQ9BXU3 409 aaPredicted RBP14.91□□□□□ -0.02
SRGAP3-201ENST00000360413 CSRNP2Q9H175 543 aa14.91□□□□□ -0.02
SRGAP3-201ENST00000360413 GOLGA6AQ9NYA3 693 aa14.91□□□□□ -0.02
SRGAP3-201ENST00000360413 KARSQ15046 597 aaKnown RBP14.91□□□□□ -0.02
SRGAP3-201ENST00000360413 ZNF354CQ86Y25 554 aa14.91□□□□□ -0.02
SRGAP3-201ENST00000360413 CDC5LQ99459 802 aaKnown RBP14.91□□□□□ -0.02
SRGAP3-201ENST00000360413 SPAG1Q07617 926 aa14.91□□□□□ -0.02
SRGAP3-201ENST00000360413 TMTC2Q8N394 836 aa14.91□□□□□ -0.02
SRGAP3-201ENST00000360413 GBP5Q96PP8 586 aa14.91□□□□□ -0.02
SRGAP3-201ENST00000360413 TERF1P54274 439 aa14.9□□□□□ -0.02
SRGAP3-201ENST00000360413 FAM69CQ0P6D2 419 aa14.9□□□□□ -0.02
SRGAP3-201ENST00000360413 ARHGEF2Q92974 986 aaKnown RBP14.9□□□□□ -0.02
SRGAP3-201ENST00000360413 GUCA1BQ9UMX6 200 aa14.9□□□□□ -0.02
SRGAP3-201ENST00000360413 CFAP65Q6ZU64 1925 aaKnown RBP14.9□□□□□ -0.02
SRGAP3-201ENST00000360413 SH3BGRP55822 239 aaPredicted RBP14.9□□□□□ -0.02
SRGAP3-201ENST00000360413 NLRP5P59047 1200 aa14.9□□□□□ -0.02
SRGAP3-201ENST00000360413 NUF2Q9BZD4 464 aa14.9□□□□□ -0.02
SRGAP3-201ENST00000360413 GNAT3A8MTJ3 354 aa14.9□□□□□ -0.02
SRGAP3-201ENST00000360413 CCDC25Q86WR0 208 aa14.9□□□□□ -0.02
SRGAP3-201ENST00000360413 DNAJC25Q9H1X3 360 aa14.9□□□□□ -0.02
SRGAP3-201ENST00000360413 HMG20BQ9P0W2 317 aa14.9□□□□□ -0.02
SRGAP3-201ENST00000360413 SLC8A3P57103 927 aa14.9□□□□□ -0.02
SRGAP3-201ENST00000360413 PHLDB2Q86SQ0 1253 aa14.9□□□□□ -0.02
SRGAP3-201ENST00000360413 TTC16Q8NEE8 873 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms