RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 TMEM266Q2M3C6 531 aa15.75■□□□□ 0.11
VCP-201ENST00000358901 UBE2Q2Q8WVN8 375 aa15.75■□□□□ 0.11
VCP-201ENST00000358901 MAP3K5Q99683 1374 aa15.75■□□□□ 0.11
VCP-201ENST00000358901 KIF5BP33176 963 aa15.75■□□□□ 0.11
VCP-201ENST00000358901 SMARCC1Q92922 1105 aaPredicted RBP15.75■□□□□ 0.11
VCP-201ENST00000358901 CDC5LQ99459 802 aaKnown RBP15.75■□□□□ 0.11
VCP-201ENST00000358901 ZNF518AQ6AHZ1 1483 aa15.75■□□□□ 0.11
VCP-201ENST00000358901 RTL1A6NKG5 1358 aa15.75■□□□□ 0.11
VCP-201ENST00000358901 FGFR1OPO95684 399 aaKnown RBP15.75■□□□□ 0.11
VCP-201ENST00000358901 MCM3P25205 808 aa15.75■□□□□ 0.11
VCP-201ENST00000358901 RTN1Q16799 776 aa15.75■□□□□ 0.11
VCP-201ENST00000358901 BICC1Q9H694 974 aaKnown RBP15.75■□□□□ 0.11
VCP-201ENST00000358901 STX8Q9UNK0 236 aa15.75■□□□□ 0.11
VCP-201ENST00000358901 ADAMTS2O95450 1211 aa15.74■□□□□ 0.11
VCP-201ENST00000358901 CCDC96Q2M329 555 aa15.74■□□□□ 0.11
VCP-201ENST00000358901 CRACR2BQ8N4Y2 399 aaPredicted RBP15.74■□□□□ 0.11
VCP-201ENST00000358901 ABCC1P33527 1531 aa15.74■□□□□ 0.11
VCP-201ENST00000358901 SHTN1A0MZ66 631 aa15.74■□□□□ 0.11
VCP-201ENST00000358901 SLU7O95391 586 aaKnown RBP15.74■□□□□ 0.11
VCP-201ENST00000358901 USP8P40818 1118 aa15.74■□□□□ 0.11
VCP-201ENST00000358901 LMAN1P49257 510 aa15.74■□□□□ 0.11
VCP-201ENST00000358901 SEPT7Q16181 437 aaKnown RBP15.74■□□□□ 0.11
VCP-201ENST00000358901 SGSM2O43147 1006 aa15.74■□□□□ 0.11
VCP-201ENST00000358901 ZNF445P59923 1031 aa15.74■□□□□ 0.11
VCP-201ENST00000358901 SBNO2Q9Y2G9 1366 aa15.74■□□□□ 0.11
VCP-201ENST00000358901 TRIM47Q96LD4 638 aa15.73■□□□□ 0.11
VCP-201ENST00000358901 LMBRD1Q9NUN5 540 aa15.73■□□□□ 0.11
VCP-201ENST00000358901 YTHDC2Q9H6S0 1430 aaKnown RBP15.73■□□□□ 0.11
VCP-201ENST00000358901 GOLGA6L7A0A1B0GV03 622 aa15.73■□□□□ 0.11
VCP-201ENST00000358901 LIG1P18858 919 aa15.73■□□□□ 0.11
VCP-201ENST00000358901 MATR3P43243 847 aaKnown RBP eCLIP15.73■□□□□ 0.118e-9■■■■■ 35.3
VCP-201ENST00000358901 VPS36Q86VN1 386 aa15.73■□□□□ 0.11
VCP-201ENST00000358901 ARFGAP3Q9NP61 516 aa15.73■□□□□ 0.11
VCP-201ENST00000358901 JADE2Q9NQC1 790 aa15.73■□□□□ 0.11
VCP-201ENST00000358901 IFNKQ9P0W0 207 aa15.73■□□□□ 0.11
VCP-201ENST00000358901 SNX14Q9Y5W7 946 aa15.73■□□□□ 0.11
VCP-201ENST00000358901 PTPRTO14522 1441 aa15.73■□□□□ 0.11
VCP-201ENST00000358901 PDE4BQ07343 736 aa15.73■□□□□ 0.11
VCP-201ENST00000358901 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.73■□□□□ 0.11
VCP-201ENST00000358901 KAT14Q9H8E8 782 aa15.73■□□□□ 0.11
VCP-201ENST00000358901 CYP7A1P22680 504 aa15.73■□□□□ 0.11
VCP-201ENST00000358901 RRAGBQ5VZM2 374 aa15.73■□□□□ 0.11
VCP-201ENST00000358901 KLHDC4Q8TBB5 520 aa15.73■□□□□ 0.11
VCP-201ENST00000358901 KRT23Q9C075 422 aa15.73■□□□□ 0.11
VCP-201ENST00000358901 AKR1B10O60218 316 aa15.72■□□□□ 0.11
VCP-201ENST00000358901 IGSF3O75054 1194 aa15.72■□□□□ 0.11
VCP-201ENST00000358901 NBPF7P0C2Y1 421 aaPredicted RBP15.72■□□□□ 0.11
VCP-201ENST00000358901 TRIM21P19474 475 aaKnown RBP15.72■□□□□ 0.11
VCP-201ENST00000358901 ZCRB1Q8TBF4 217 aaKnown RBP15.72■□□□□ 0.11
VCP-201ENST00000358901 ESR2Q92731 530 aa15.72■□□□□ 0.11
VCP-201ENST00000358901 DDX21Q9NR30 783 aaKnown RBP eCLIP15.72■□□□□ 0.11
VCP-201ENST00000358901 SLC4A4Q9Y6R1 1079 aa15.72■□□□□ 0.11
VCP-201ENST00000358901 RAD50Q92878 1312 aa15.72■□□□□ 0.11
VCP-201ENST00000358901 POTEB2H3BUK9 544 aa15.72■□□□□ 0.11
VCP-201ENST00000358901 TIMM10P62072 90 aa15.72■□□□□ 0.11
VCP-201ENST00000358901 HLTFQ14527 1009 aaKnown RBP eCLIP15.72■□□□□ 0.11
VCP-201ENST00000358901 MCM6Q14566 821 aa15.72■□□□□ 0.11
VCP-201ENST00000358901 TMTC2Q8N394 836 aa15.72■□□□□ 0.11
VCP-201ENST00000358901 CALML4Q96GE6 196 aa15.72■□□□□ 0.11
VCP-201ENST00000358901 ADGRL2O95490 1459 aa15.72■□□□□ 0.11
VCP-201ENST00000358901 A0A1B0GVL5 298 aa15.72■□□□□ 0.11
VCP-201ENST00000358901 RNF113AO15541 343 aaKnown RBP15.72■□□□□ 0.11
VCP-201ENST00000358901 HOXC9P31274 260 aa15.72■□□□□ 0.11
VCP-201ENST00000358901 SSR1P43307 286 aaKnown RBP15.72■□□□□ 0.11
VCP-201ENST00000358901 CCDC40Q4G0X9 1142 aa15.72■□□□□ 0.11
VCP-201ENST00000358901 RXRAP19793 462 aa15.71■□□□□ 0.11
VCP-201ENST00000358901 CCDC178Q5BJE1 867 aa15.71■□□□□ 0.11
VCP-201ENST00000358901 TCERG1LQ5VWI1 586 aa15.71■□□□□ 0.11
VCP-201ENST00000358901 GADD45BO75293 160 aaPredicted RBP15.71■□□□□ 0.11
VCP-201ENST00000358901 AMPD3Q01432 767 aa15.71■□□□□ 0.11
VCP-201ENST00000358901 FAM227BQ96M60 508 aa15.71■□□□□ 0.11
VCP-201ENST00000358901 CCDC113Q9H0I3 377 aa15.71■□□□□ 0.11
VCP-201ENST00000358901 TMEM63CQ9P1W3 806 aa15.71■□□□□ 0.11
VCP-201ENST00000358901 GCP02774 474 aa15.71■□□□□ 0.11
VCP-201ENST00000358901 PLCD4Q9BRC7 762 aa15.71■□□□□ 0.11
VCP-201ENST00000358901 PYM1Q9BRP8 204 aaKnown RBP15.71■□□□□ 0.11
VCP-201ENST00000358901 ANKRD62A6NC57 917 aa15.71■□□□□ 0.1
VCP-201ENST00000358901 HELBQ8NG08 1087 aaPredicted RBP15.71■□□□□ 0.1
VCP-201ENST00000358901 DHX58Q96C10 678 aa15.71■□□□□ 0.1
VCP-201ENST00000358901 CNNM2Q9H8M5 875 aa15.71■□□□□ 0.1
VCP-201ENST00000358901 PIP4K2BP78356 416 aa15.7■□□□□ 0.1
VCP-201ENST00000358901 SPECC1Q5M775 1068 aa15.7■□□□□ 0.1
VCP-201ENST00000358901 CCDC129Q6ZRS4 1044 aa15.7■□□□□ 0.1
VCP-201ENST00000358901 C17orf53Q8N3J3 647 aaPredicted RBP15.7■□□□□ 0.1
VCP-201ENST00000358901 TRIM75PA6NK02 468 aa15.7■□□□□ 0.1
VCP-201ENST00000358901 MYO1BO43795 1136 aa15.7■□□□□ 0.1
VCP-201ENST00000358901 KIF20AO95235 890 aa15.7■□□□□ 0.1
VCP-201ENST00000358901 GSPT1P15170 499 aaKnown RBP15.7■□□□□ 0.1
VCP-201ENST00000358901 IFIT1BQ5T764 474 aaKnown RBP15.7■□□□□ 0.1
VCP-201ENST00000358901 CADPS2Q86UW7 1296 aa15.7■□□□□ 0.1
VCP-201ENST00000358901 CABLES1Q8TDN4 633 aa15.7■□□□□ 0.1
VCP-201ENST00000358901 ALS2CR12Q96Q35 445 aa15.7■□□□□ 0.1
VCP-201ENST00000358901 BMP15O95972 392 aa15.69■□□□□ 0.1
VCP-201ENST00000358901 STX17P56962 302 aa15.69■□□□□ 0.1
VCP-201ENST00000358901 CTR9Q6PD62 1173 aa15.69■□□□□ 0.1
VCP-201ENST00000358901 TMCO5BA8MYB1 307 aa15.69■□□□□ 0.1
VCP-201ENST00000358901 SPAG1Q07617 926 aa15.69■□□□□ 0.1
VCP-201ENST00000358901 SYT10Q6XYQ8 523 aa15.69■□□□□ 0.1
VCP-201ENST00000358901 SLC27A2O14975 620 aa15.69■□□□□ 0.1
VCP-201ENST00000358901 RPS6KB1P23443 525 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms