RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 ZNF609O15014 1411 aa16.05■□□□□ 0.16
NFIX-201ENST00000358552 PDE8BO95263 885 aa16.05■□□□□ 0.16
NFIX-201ENST00000358552 BAG6P46379 1132 aa16.05■□□□□ 0.16
NFIX-201ENST00000358552 EN1Q05925 392 aaPredicted RBP16.05■□□□□ 0.16
NFIX-201ENST00000358552 USPL1Q5W0Q7 1092 aa16.05■□□□□ 0.16
NFIX-201ENST00000358552 ARHGEF1Q92888 912 aaKnown RBP16.05■□□□□ 0.16
NFIX-201ENST00000358552 ZNF594Q96JF6 807 aaPredicted RBP16.05■□□□□ 0.16
NFIX-201ENST00000358552 FSD1Q9BTV5 496 aa16.05■□□□□ 0.16
NFIX-201ENST00000358552 SCN7AQ01118 1682 aa16.04■□□□□ 0.16
NFIX-201ENST00000358552 NLRP3Q96P20 1036 aa16.04■□□□□ 0.16
NFIX-201ENST00000358552 TBC1D2Q9BYX2 928 aa16.04■□□□□ 0.16
NFIX-201ENST00000358552 EZH2Q15910 746 aaKnown RBP16.03■□□□□ 0.16
NFIX-201ENST00000358552 ATP2B3Q16720 1220 aa16.03■□□□□ 0.16
NFIX-201ENST00000358552 AMIGO3Q86WK7 504 aa16.03■□□□□ 0.16
NFIX-201ENST00000358552 FLAD1Q8NFF5 587 aa16.03■□□□□ 0.16
NFIX-201ENST00000358552 LPIN2Q92539 896 aa16.03■□□□□ 0.16
NFIX-201ENST00000358552 TLR7Q9NYK1 1049 aaKnown RBP16.03■□□□□ 0.16
NFIX-201ENST00000358552 IFIT1P09914 478 aaKnown RBP16.02■□□□□ 0.16
NFIX-201ENST00000358552 UQCRFS1P1P0C7P4 283 aa16.02■□□□□ 0.16
NFIX-201ENST00000358552 TIMM10P62072 90 aa16.02■□□□□ 0.16
NFIX-201ENST00000358552 PUM3Q15397 648 aaKnown RBP16.02■□□□□ 0.16
NFIX-201ENST00000358552 NBPF5PQ86XG9 351 aaPredicted RBP16.02■□□□□ 0.16
NFIX-201ENST00000358552 SYNE4Q8N205 404 aa16.02■□□□□ 0.16
NFIX-201ENST00000358552 KBTBD3Q8NAB2 608 aa16.02■□□□□ 0.16
NFIX-201ENST00000358552 AKT1S1Q96B36 256 aa16.02■□□□□ 0.16
NFIX-201ENST00000358552 KIF2CQ99661 725 aa16.02■□□□□ 0.16
NFIX-201ENST00000358552 PUS3Q9BZE2 481 aaKnown RBP16.02■□□□□ 0.16
NFIX-201ENST00000358552 SPEF2Q9C093 1822 aa16.02■□□□□ 0.16
NFIX-201ENST00000358552 LAMB2P55268 1798 aa16.02■□□□□ 0.15
NFIX-201ENST00000358552 ZFYP08048 801 aaPredicted RBP16.02■□□□□ 0.15
NFIX-201ENST00000358552 HCLS1P14317 486 aaPredicted RBP16.02■□□□□ 0.15
NFIX-201ENST00000358552 TTF1Q15361 905 aaPredicted RBP16.02■□□□□ 0.15
NFIX-201ENST00000358552 TTC39AQ5SRH9 613 aa16.02■□□□□ 0.15
NFIX-201ENST00000358552 CWC27Q6UX04 472 aaKnown RBP16.02■□□□□ 0.15
NFIX-201ENST00000358552 SMIM5Q71RC9 77 aa16.02■□□□□ 0.15
NFIX-201ENST00000358552 XAGE2Q96GT9 111 aa16.02■□□□□ 0.15
NFIX-201ENST00000358552 BCL2L12Q9HB09 334 aa16.02■□□□□ 0.15
NFIX-201ENST00000358552 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.02■□□□□ 0.15
NFIX-201ENST00000358552 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.01■□□□□ 0.15
NFIX-201ENST00000358552 MAP4K4O95819 1239 aaPredicted RBP16.01■□□□□ 0.15
NFIX-201ENST00000358552 HSPA4P34932 840 aa16.01■□□□□ 0.15
NFIX-201ENST00000358552 SLC4A3P48751 1232 aa16.01■□□□□ 0.15
NFIX-201ENST00000358552 TBC1D9BQ66K14 1250 aa16.01■□□□□ 0.15
NFIX-201ENST00000358552 ILDR2Q71H61 639 aa16.01■□□□□ 0.15
NFIX-201ENST00000358552 PAG1Q9NWQ8 432 aa16.01■□□□□ 0.15
NFIX-201ENST00000358552 QSER1Q2KHR3 1735 aa16.01■□□□□ 0.15
NFIX-201ENST00000358552 CARMIL3Q8ND23 1372 aa16■□□□□ 0.15
NFIX-201ENST00000358552 PHF14O94880 888 aa16■□□□□ 0.15
NFIX-201ENST00000358552 SLC5A1P13866 664 aa16■□□□□ 0.15
NFIX-201ENST00000358552 RNF20Q5VTR2 975 aa16■□□□□ 0.15
NFIX-201ENST00000358552 ZSCAN25Q6NSZ9 544 aa16■□□□□ 0.15
NFIX-201ENST00000358552 ANKRD18AQ8IVF6 992 aa16■□□□□ 0.15
NFIX-201ENST00000358552 VGLL2Q8N8G2 317 aa16■□□□□ 0.15
NFIX-201ENST00000358552 HELLSQ9NRZ9 838 aa16■□□□□ 0.15
NFIX-201ENST00000358552 ZNF827Q17R98 1081 aa15.99■□□□□ 0.15
NFIX-201ENST00000358552 DEFB132Q7Z7B7 95 aa15.99■□□□□ 0.15
NFIX-201ENST00000358552 CCDC85AQ96PX6 553 aaPredicted RBP15.99■□□□□ 0.15
NFIX-201ENST00000358552 BSDC1Q9NW68 430 aaPredicted RBP15.99■□□□□ 0.15
NFIX-201ENST00000358552 TFCP2L1Q9NZI6 479 aa15.99■□□□□ 0.15
NFIX-201ENST00000358552 ZKSCAN1P17029 563 aaPredicted RBP15.99■□□□□ 0.15
NFIX-201ENST00000358552 ERFEQ4G0M1 354 aa15.99■□□□□ 0.15
NFIX-201ENST00000358552 LSG1Q9H089 658 aaKnown RBP15.99■□□□□ 0.15
NFIX-201ENST00000358552 RIC1Q4ADV7 1423 aa15.98■□□□□ 0.15
NFIX-201ENST00000358552 LRP5O75197 1615 aa15.98■□□□□ 0.15
NFIX-201ENST00000358552 FAM177BA6PVY3 158 aa15.98■□□□□ 0.15
NFIX-201ENST00000358552 K7ELQ4 463 aaPredicted RBP15.98■□□□□ 0.15
NFIX-201ENST00000358552 MCMDC2Q4G0Z9 681 aa15.98■□□□□ 0.15
NFIX-201ENST00000358552 DNAJC2Q99543 621 aaKnown RBP15.98■□□□□ 0.15
NFIX-201ENST00000358552 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.98■□□□□ 0.151e-6■■■■□ 20.5
NFIX-201ENST00000358552 SRP68Q9UHB9 627 aaKnown RBP15.98■□□□□ 0.15
NFIX-201ENST00000358552 ZBTB22O15209 634 aa15.97■□□□□ 0.15
NFIX-201ENST00000358552 NPHP1O15259 732 aa15.97■□□□□ 0.15
NFIX-201ENST00000358552 IGSF3O75054 1194 aa15.97■□□□□ 0.15
NFIX-201ENST00000358552 FGFR2P21802 821 aa15.97■□□□□ 0.15
NFIX-201ENST00000358552 ANKRD2Q9GZV1 360 aa15.97■□□□□ 0.15
NFIX-201ENST00000358552 HMG20BQ9P0W2 317 aa15.97■□□□□ 0.15
NFIX-201ENST00000358552 UBE4AQ14139 1066 aa15.97■□□□□ 0.15
NFIX-201ENST00000358552 BICDL1Q6ZP65 573 aa15.97■□□□□ 0.15
NFIX-201ENST00000358552 MAP4K1Q92918 833 aa15.97■□□□□ 0.15
NFIX-201ENST00000358552 KCNB2Q92953 911 aa15.97■□□□□ 0.15
NFIX-201ENST00000358552 COL24A1Q17RW2 1714 aa15.96■□□□□ 0.15
NFIX-201ENST00000358552 DDX60Q8IY21 1712 aaKnown RBP15.96■□□□□ 0.15
NFIX-201ENST00000358552 CCDC171Q6TFL3 1326 aa15.96■□□□□ 0.15
NFIX-201ENST00000358552 NMIQ13287 307 aaPredicted RBP15.96■□□□□ 0.15
NFIX-201ENST00000358552 TM6SF1Q9BZW5 370 aa15.96■□□□□ 0.15
NFIX-201ENST00000358552 GNL3LQ9NVN8 582 aaKnown RBP15.96■□□□□ 0.15
NFIX-201ENST00000358552 CIZ1Q9ULV3 898 aaPredicted RBP15.96■□□□□ 0.15
NFIX-201ENST00000358552 GOLIM4O00461 696 aa15.95■□□□□ 0.14
NFIX-201ENST00000358552 HSP90AA1P07900 732 aaKnown RBP15.95■□□□□ 0.14
NFIX-201ENST00000358552 PSMA5P28066 241 aa15.95■□□□□ 0.14
NFIX-201ENST00000358552 ARID4AP29374 1257 aaPredicted RBP15.95■□□□□ 0.14
NFIX-201ENST00000358552 RPS8P62241 208 aaKnown RBP15.95■□□□□ 0.14
NFIX-201ENST00000358552 KRT32Q14532 448 aa15.95■□□□□ 0.14
NFIX-201ENST00000358552 SLC15A2Q16348 729 aa15.95■□□□□ 0.14
NFIX-201ENST00000358552 TMED8Q6PL24 325 aaPredicted RBP15.95■□□□□ 0.14
NFIX-201ENST00000358552 DDX46Q7L014 1031 aaKnown RBP15.95■□□□□ 0.14
NFIX-201ENST00000358552 CNBD1Q8NA66 436 aa15.95■□□□□ 0.14
NFIX-201ENST00000358552 RNF113AO15541 343 aaKnown RBP15.94■□□□□ 0.14
NFIX-201ENST00000358552 PTMSP20962 102 aa15.94■□□□□ 0.14
NFIX-201ENST00000358552 KCNJ4P48050 445 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms