RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 RREB1Q92766 1687 aa4.89□□□□□ -1.63
CNGA1-201ENST00000358519 DNAJB2P25686 324 aa4.89□□□□□ -1.63
CNGA1-201ENST00000358519 DDIT3P35638 169 aa4.89□□□□□ -1.63
CNGA1-201ENST00000358519 PRELPP51888 382 aa4.89□□□□□ -1.63
CNGA1-201ENST00000358519 SLFN5Q08AF3 891 aa4.89□□□□□ -1.63
CNGA1-201ENST00000358519 TMEM132EQ6IEE7 984 aa4.89□□□□□ -1.63
CNGA1-201ENST00000358519 TEX2Q8IWB9 1127 aa4.89□□□□□ -1.63
CNGA1-201ENST00000358519 GBP4Q96PP9 640 aa4.89□□□□□ -1.63
CNGA1-201ENST00000358519 FHDC1Q9C0D6 1143 aaPredicted RBP4.89□□□□□ -1.63
CNGA1-201ENST00000358519 NUP188Q5SRE5 1749 aa4.88□□□□□ -1.63
CNGA1-201ENST00000358519 MCM5P33992 734 aa4.88□□□□□ -1.63
CNGA1-201ENST00000358519 TPRNQ4KMQ1 711 aa4.88□□□□□ -1.63
CNGA1-201ENST00000358519 MYRIPQ8NFW9 859 aa4.88□□□□□ -1.63
CNGA1-201ENST00000358519 TSC1Q92574 1164 aa4.88□□□□□ -1.63
CNGA1-201ENST00000358519 SECISBP2LQ93073 1101 aaKnown RBP4.88□□□□□ -1.63
CNGA1-201ENST00000358519 PDLIM2Q96JY6 352 aa4.88□□□□□ -1.63
CNGA1-201ENST00000358519 C22orf23Q9BZE7 217 aa4.88□□□□□ -1.63
CNGA1-201ENST00000358519 ACEP12821 1306 aa4.88□□□□□ -1.63
CNGA1-201ENST00000358519 GTPBP6O43824 516 aaPredicted RBP4.88□□□□□ -1.63
CNGA1-201ENST00000358519 PTMSP20962 102 aa4.88□□□□□ -1.63
CNGA1-201ENST00000358519 HSCBQ8IWL3 235 aa4.88□□□□□ -1.63
CNGA1-201ENST00000358519 GAS2L2Q8NHY3 880 aa4.88□□□□□ -1.63
CNGA1-201ENST00000358519 PLEKHF1Q96S99 279 aa4.88□□□□□ -1.63
CNGA1-201ENST00000358519 REPIN1Q9BWE0 567 aaKnown RBP4.88□□□□□ -1.63
CNGA1-201ENST00000358519 SLC12A5Q9H2X9 1139 aa4.88□□□□□ -1.63
CNGA1-201ENST00000358519 CDHR5Q9HBB8 845 aa4.88□□□□□ -1.63
CNGA1-201ENST00000358519 IFT57Q9NWB7 429 aa4.88□□□□□ -1.63
CNGA1-201ENST00000358519 MINK1Q8N4C8 1332 aaPredicted RBP4.87□□□□□ -1.63
CNGA1-201ENST00000358519 IGSF1Q8N6C5 1336 aa4.87□□□□□ -1.63
CNGA1-201ENST00000358519 KIF16BQ96L93 1317 aa4.87□□□□□ -1.63
CNGA1-201ENST00000358519 ZBTB7AO95365 584 aa4.87□□□□□ -1.63
CNGA1-201ENST00000358519 GNAI1P63096 354 aa4.87□□□□□ -1.63
CNGA1-201ENST00000358519 AMOTQ4VCS5 1084 aa4.87□□□□□ -1.63
CNGA1-201ENST00000358519 TNS4Q8IZW8 715 aa4.87□□□□□ -1.63
CNGA1-201ENST00000358519 CABLES1Q8TDN4 633 aa4.87□□□□□ -1.63
CNGA1-201ENST00000358519 STK32BQ9NY57 414 aa4.87□□□□□ -1.63
CNGA1-201ENST00000358519 CABP1Q9NZU7 370 aa4.87□□□□□ -1.63
CNGA1-201ENST00000358519 ADAMTS8Q9UP79 889 aa4.87□□□□□ -1.63
CNGA1-201ENST00000358519 HDAC5Q9UQL6 1122 aa4.87□□□□□ -1.63
CNGA1-201ENST00000358519 PRR36Q9H6K5 1346 aa4.87□□□□□ -1.63
CNGA1-201ENST00000358519 GRIN3BO60391 1043 aa4.87□□□□□ -1.63
CNGA1-201ENST00000358519 IRX3P78415 501 aaPredicted RBP4.87□□□□□ -1.63
CNGA1-201ENST00000358519 RAB3GAP1Q15042 981 aa4.87□□□□□ -1.63
CNGA1-201ENST00000358519 ZNF771Q7L3S4 317 aaPredicted RBP4.87□□□□□ -1.63
CNGA1-201ENST00000358519 MRGPRX2Q96LB1 330 aa4.87□□□□□ -1.63
CNGA1-201ENST00000358519 MTFR1LQ9H019 292 aa4.87□□□□□ -1.63
CNGA1-201ENST00000358519 DDX49Q9Y6V7 483 aaKnown RBP4.87□□□□□ -1.63
CNGA1-201ENST00000358519 UBR2Q8IWV8 1755 aa4.86□□□□□ -1.63
CNGA1-201ENST00000358519 IPO8O15397 1037 aaKnown RBP4.86□□□□□ -1.63
CNGA1-201ENST00000358519 ADAM23O75077 832 aa4.86□□□□□ -1.63
CNGA1-201ENST00000358519 BCAR3O75815 825 aa4.86□□□□□ -1.63
CNGA1-201ENST00000358519 IL13P35225 146 aa4.86□□□□□ -1.63
CNGA1-201ENST00000358519 KCNJ4P48050 445 aa4.86□□□□□ -1.63
CNGA1-201ENST00000358519 NFE2L2Q16236 605 aa4.86□□□□□ -1.63
CNGA1-201ENST00000358519 KLHL40Q2TBA0 621 aa4.86□□□□□ -1.63
CNGA1-201ENST00000358519 RGS22Q8NE09 1264 aa4.86□□□□□ -1.63
CNGA1-201ENST00000358519 GPBP1L1Q9HC44 474 aaPredicted RBP4.86□□□□□ -1.63
CNGA1-201ENST00000358519 MAP3K5Q99683 1374 aa4.86□□□□□ -1.63
CNGA1-201ENST00000358519 THSD7AQ9UPZ6 1657 aa4.86□□□□□ -1.63
CNGA1-201ENST00000358519 ZBTB7CA1YPR0 619 aa4.86□□□□□ -1.63
CNGA1-201ENST00000358519 FAM177BA6PVY3 158 aa4.86□□□□□ -1.63
CNGA1-201ENST00000358519 GTF2F1P35269 517 aaKnown RBP eCLIP4.86□□□□□ -1.63
CNGA1-201ENST00000358519 MTHFSP49914 203 aa4.86□□□□□ -1.63
CNGA1-201ENST00000358519 MFAP1P55081 439 aaKnown RBP4.86□□□□□ -1.63
CNGA1-201ENST00000358519 SLC20A2Q08357 652 aa4.86□□□□□ -1.63
CNGA1-201ENST00000358519 CC2D1BQ5T0F9 858 aaKnown RBP4.86□□□□□ -1.63
CNGA1-201ENST00000358519 TRIM46Q7Z4K8 759 aa4.86□□□□□ -1.63
CNGA1-201ENST00000358519 TICAM2Q86XR7 235 aa4.86□□□□□ -1.63
CNGA1-201ENST00000358519 CLUAP1Q96AJ1 413 aa4.86□□□□□ -1.63
CNGA1-201ENST00000358519 DNAJC2Q99543 621 aaKnown RBP4.86□□□□□ -1.63
CNGA1-201ENST00000358519 RBSNQ9H1K0 784 aa4.86□□□□□ -1.63
CNGA1-201ENST00000358519 TMEM134Q9H6X4 195 aa4.86□□□□□ -1.63
CNGA1-201ENST00000358519 POLKQ9UBT6 870 aa4.86□□□□□ -1.63
CNGA1-201ENST00000358519 ATP10DQ9P241 1426 aa4.85□□□□□ -1.63
CNGA1-201ENST00000358519 NRAPQ86VF7 1730 aa4.85□□□□□ -1.63
CNGA1-201ENST00000358519 NUTM2FA1L443 756 aa4.85□□□□□ -1.63
CNGA1-201ENST00000358519 PLSCR1O15162 318 aa4.85□□□□□ -1.63
CNGA1-201ENST00000358519 BRD2P25440 801 aaKnown RBP4.85□□□□□ -1.63
CNGA1-201ENST00000358519 RBM25P49756 843 aaKnown RBP4.85□□□□□ -1.63
CNGA1-201ENST00000358519 ZNF445P59923 1031 aa4.85□□□□□ -1.63
CNGA1-201ENST00000358519 HMGN5P82970 282 aaKnown RBP4.85□□□□□ -1.63
CNGA1-201ENST00000358519 CERS3Q8IU89 383 aa4.85□□□□□ -1.63
CNGA1-201ENST00000358519 SMC5Q8IY18 1101 aa4.85□□□□□ -1.63
CNGA1-201ENST00000358519 IP6K1Q92551 441 aa4.85□□□□□ -1.63
CNGA1-201ENST00000358519 PRIMPOLQ96LW4 560 aa4.85□□□□□ -1.63
CNGA1-201ENST00000358519 CCDC39Q9UFE4 941 aa4.85□□□□□ -1.63
CNGA1-201ENST00000358519 SPATA31A1Q5TZJ5 1347 aa4.85□□□□□ -1.63
CNGA1-201ENST00000358519 GOLGA6L22H0YM25 854 aa4.85□□□□□ -1.63
CNGA1-201ENST00000358519 HSP90AB1P08238 724 aaKnown RBP4.85□□□□□ -1.63
CNGA1-201ENST00000358519 KANK3Q6NY19 840 aa4.85□□□□□ -1.63
CNGA1-201ENST00000358519 DHX37Q8IY37 1157 aaKnown RBP4.85□□□□□ -1.63
CNGA1-201ENST00000358519 PDCL2Q8N4E4 241 aa4.85□□□□□ -1.63
CNGA1-201ENST00000358519 CDCA7Q9BWT1 371 aaPredicted RBP4.85□□□□□ -1.63
CNGA1-201ENST00000358519 PRDM11Q9NQV5 511 aa4.85□□□□□ -1.63
CNGA1-201ENST00000358519 STK26Q9P289 416 aa4.85□□□□□ -1.63
CNGA1-201ENST00000358519 KIF3AQ9Y496 699 aa4.85□□□□□ -1.63
CNGA1-201ENST00000358519 ZNF853P0CG23 659 aa4.84□□□□□ -1.63
CNGA1-201ENST00000358519 U2AF2P26368 475 aaKnown RBP eCLIP4.84□□□□□ -1.63
CNGA1-201ENST00000358519 EVA1CP58658 441 aa4.84□□□□□ -1.63
CNGA1-201ENST00000358519 KIAA2012Q0VF49 1180 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms