RNA–Protein interactions for RNA: ENST00000357482.5

USP6-202, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 1 (best)

Gene USP6, Length 1,947 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-202ENST00000357482 PLCD4Q9BRC7 762 aa17.44■□□□□ 0.38
USP6-202ENST00000357482 MED4Q9NPJ6 270 aa17.44■□□□□ 0.38
USP6-202ENST00000357482 TMPOP42166 694 aaKnown RBP17.43■□□□□ 0.38
USP6-202ENST00000357482 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.43■□□□□ 0.38
USP6-202ENST00000357482 KCNQ3O43525 872 aa17.43■□□□□ 0.38
USP6-202ENST00000357482 C10orf71Q711Q0 1435 aa17.42■□□□□ 0.38
USP6-202ENST00000357482 UTRNP46939 3433 aa17.42■□□□□ 0.38
USP6-202ENST00000357482 HTATSF1O43719 755 aaKnown RBP17.42■□□□□ 0.38
USP6-202ENST00000357482 TGFB2P61812 414 aa17.42■□□□□ 0.38
USP6-202ENST00000357482 WDR63Q8IWG1 891 aa17.42■□□□□ 0.38
USP6-202ENST00000357482 NARFQ9UHQ1 456 aa17.42■□□□□ 0.38
USP6-202ENST00000357482 A0A0G2JLW4 131 aa17.41■□□□□ 0.38
USP6-202ENST00000357482 A0A1B0GUL7 405 aa17.41■□□□□ 0.38
USP6-202ENST00000357482 SYCE3A1L190 88 aa17.41■□□□□ 0.38
USP6-202ENST00000357482 BMS1Q14692 1282 aaKnown RBP17.41■□□□□ 0.38
USP6-202ENST00000357482 PRR29P0C7W0 189 aa17.41■□□□□ 0.38
USP6-202ENST00000357482 DDR1Q08345 913 aa17.41■□□□□ 0.38
USP6-202ENST00000357482 GPT2Q8TD30 523 aa17.41■□□□□ 0.38
USP6-202ENST00000357482 CFAP44Q96MT7 982 aa17.41■□□□□ 0.38
USP6-202ENST00000357482 DEF6Q9H4E7 631 aa17.41■□□□□ 0.38
USP6-202ENST00000357482 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.41■□□□□ 0.38
USP6-202ENST00000357482 PXDNLA1KZ92 1463 aa17.4■□□□□ 0.38
USP6-202ENST00000357482 A0A087WZG4 1122 aa17.4■□□□□ 0.38
USP6-202ENST00000357482 CLSTN1O94985 981 aa17.4■□□□□ 0.38
USP6-202ENST00000357482 BCS1LQ9Y276 419 aa17.4■□□□□ 0.38
USP6-202ENST00000357482 DLG5Q8TDM6 1919 aa17.4■□□□□ 0.38
USP6-202ENST00000357482 N4BP2Q86UW6 1770 aaPredicted RBP17.39■□□□□ 0.38
USP6-202ENST00000357482 GPS2Q13227 327 aa17.39■□□□□ 0.37
USP6-202ENST00000357482 TMEM63CQ9P1W3 806 aa17.39■□□□□ 0.37
USP6-202ENST00000357482 TRIM35Q9UPQ4 493 aa17.39■□□□□ 0.37
USP6-202ENST00000357482 JRKLQ9Y4A0 524 aa17.39■□□□□ 0.37
USP6-202ENST00000357482 BCAR3O75815 825 aa17.39■□□□□ 0.37
USP6-202ENST00000357482 A1BGP04217 495 aa17.39■□□□□ 0.37
USP6-202ENST00000357482 DPEP1P16444 411 aa17.39■□□□□ 0.37
USP6-202ENST00000357482 TAF7Q15545 349 aaPredicted RBP17.39■□□□□ 0.37
USP6-202ENST00000357482 NFE2L2Q16236 605 aa17.39■□□□□ 0.37
USP6-202ENST00000357482 SWT1Q5T5J6 900 aaKnown RBP17.39■□□□□ 0.37
USP6-202ENST00000357482 KIF13BQ9NQT8 1826 aa17.38■□□□□ 0.37
USP6-202ENST00000357482 MYO1CO00159 1063 aa17.38■□□□□ 0.37
USP6-202ENST00000357482 POLRMTO00411 1230 aaKnown RBP17.38■□□□□ 0.37
USP6-202ENST00000357482 PRPF40AO75400 957 aaKnown RBP17.38■□□□□ 0.37
USP6-202ENST00000357482 EIF5P55010 431 aaKnown RBP17.38■□□□□ 0.37
USP6-202ENST00000357482 TRDNQ13061 729 aa17.38■□□□□ 0.37
USP6-202ENST00000357482 RABEP1Q15276 862 aa17.38■□□□□ 0.37
USP6-202ENST00000357482 BICDL1Q6ZP65 573 aa17.38■□□□□ 0.37
USP6-202ENST00000357482 USP25Q9UHP3 1055 aa17.38■□□□□ 0.37
USP6-202ENST00000357482 COG6Q9Y2V7 657 aa17.38■□□□□ 0.37
USP6-202ENST00000357482 TM4SF1P30408 202 aa17.37■□□□□ 0.37
USP6-202ENST00000357482 GSCP56915 257 aaPredicted RBP17.37■□□□□ 0.37
USP6-202ENST00000357482 NFIXQ14938 502 aa17.37■□□□□ 0.37
USP6-202ENST00000357482 MIS18AQ9NYP9 233 aa17.37■□□□□ 0.37
USP6-202ENST00000357482 TBC1D2BQ9UPU7 963 aa17.37■□□□□ 0.37
USP6-202ENST00000357482 V9GYY5 206 aaPredicted RBP17.37■□□□□ 0.37
USP6-202ENST00000357482 GOLGB1Q14789 3259 aaKnown RBP17.37■□□□□ 0.37
USP6-202ENST00000357482 SNRPA1P09661 255 aaKnown RBP17.37■□□□□ 0.37
USP6-202ENST00000357482 TPM4P67936 248 aa17.37■□□□□ 0.37
USP6-202ENST00000357482 MAP2K1Q02750 393 aaPredicted RBP17.37■□□□□ 0.37
USP6-202ENST00000357482 TTC12Q9H892 705 aaPredicted RBP17.37■□□□□ 0.37
USP6-202ENST00000357482 USP16Q9Y5T5 823 aa17.37■□□□□ 0.37
USP6-202ENST00000357482 PRAMEF22A3QJZ6 481 aa17.36■□□□□ 0.37
USP6-202ENST00000357482 ATP2B1P20020 1258 aa17.36■□□□□ 0.37
USP6-202ENST00000357482 IL6STP40189 918 aaPredicted RBP17.36■□□□□ 0.37
USP6-202ENST00000357482 PIP4K2AP48426 406 aaPredicted RBP17.36■□□□□ 0.37
USP6-202ENST00000357482 CCDC112Q8NEF3 446 aa17.36■□□□□ 0.37
USP6-202ENST00000357482 PCDHB15Q9Y5E8 787 aa17.36■□□□□ 0.37
USP6-202ENST00000357482 THUMPD2Q9BTF0 503 aaKnown RBP17.35■□□□□ 0.37
USP6-202ENST00000357482 KIAA1551Q9HCM1 1747 aa17.35■□□□□ 0.37
USP6-202ENST00000357482 GOLIM4O00461 696 aa17.35■□□□□ 0.37
USP6-202ENST00000357482 ADCY5O95622 1261 aa17.35■□□□□ 0.37
USP6-202ENST00000357482 TDO2P48775 406 aa17.35■□□□□ 0.37
USP6-202ENST00000357482 SUGP1Q8IWZ8 645 aaKnown RBP17.35■□□□□ 0.37
USP6-202ENST00000357482 TRERF1Q96PN7 1200 aa17.35■□□□□ 0.37
USP6-202ENST00000357482 KIF2CQ99661 725 aa17.35■□□□□ 0.37
USP6-202ENST00000357482 SERPINB2P05120 415 aa17.34■□□□□ 0.37
USP6-202ENST00000357482 ZNF853P0CG23 659 aa17.34■□□□□ 0.37
USP6-202ENST00000357482 CXorf56Q9H5V9 222 aa17.34■□□□□ 0.37
USP6-202ENST00000357482 BSDC1Q9NW68 430 aaPredicted RBP17.34■□□□□ 0.37
USP6-202ENST00000357482 PIM2Q9P1W9 311 aa17.34■□□□□ 0.37
USP6-202ENST00000357482 RBM27Q9P2N5 1060 aaKnown RBP17.34■□□□□ 0.37
USP6-202ENST00000357482 KIF3CO14782 793 aa17.33■□□□□ 0.37
USP6-202ENST00000357482 CHRNA5P30532 468 aa17.33■□□□□ 0.37
USP6-202ENST00000357482 RNF214Q8ND24 703 aa17.33■□□□□ 0.37
USP6-202ENST00000357482 IL16Q14005 1332 aa17.33■□□□□ 0.36
USP6-202ENST00000357482 NPHP1O15259 732 aa17.33■□□□□ 0.36
USP6-202ENST00000357482 HDAC1Q13547 482 aaPredicted RBP17.33■□□□□ 0.36
USP6-202ENST00000357482 ARHGAP27Q6ZUM4 889 aa17.33■□□□□ 0.36
USP6-202ENST00000357482 DZIP3Q86Y13 1208 aaKnown RBP17.33■□□□□ 0.36
USP6-202ENST00000357482 TTC31Q49AM3 519 aaPredicted RBP17.32■□□□□ 0.36
USP6-202ENST00000357482 TBC1D9BQ66K14 1250 aa17.32■□□□□ 0.36
USP6-202ENST00000357482 DALRD3Q5D0E6 543 aaKnown RBP17.31■□□□□ 0.36
USP6-202ENST00000357482 SYT10Q6XYQ8 523 aa17.31■□□□□ 0.36
USP6-202ENST00000357482 PANK1Q8TE04 598 aa17.31■□□□□ 0.36
USP6-202ENST00000357482 SCN7AQ01118 1682 aa17.31■□□□□ 0.36
USP6-202ENST00000357482 ATP10DQ9P241 1426 aa17.31■□□□□ 0.36
USP6-202ENST00000357482 HMGB1P09429 215 aaKnown RBP17.31■□□□□ 0.36
USP6-202ENST00000357482 KCNA3P22001 575 aa17.31■□□□□ 0.36
USP6-202ENST00000357482 SSR1P43307 286 aaKnown RBP17.31■□□□□ 0.36
USP6-202ENST00000357482 TMED8Q6PL24 325 aaPredicted RBP17.31■□□□□ 0.36
USP6-202ENST00000357482 GPATCH11Q8N954 259 aa17.31■□□□□ 0.36
USP6-202ENST00000357482 IQUBQ8NA54 791 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms