RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 PPEF1O14829 653 aaPredicted RBP31.49■■■□□ 2.63
SSBP3-202ENST00000357475 BSDC1Q9NW68 430 aaPredicted RBP31.49■■■□□ 2.63
SSBP3-202ENST00000357475 SASH1O94885 1247 aa31.48■■■□□ 2.63
SSBP3-202ENST00000357475 ALDH1B1P30837 517 aa31.48■■■□□ 2.63
SSBP3-202ENST00000357475 SYT17Q9BSW7 474 aa31.48■■■□□ 2.63
SSBP3-202ENST00000357475 CNKSR1Q969H4 720 aa31.47■■■□□ 2.63
SSBP3-202ENST00000357475 BBOX1O75936 387 aa31.46■■■□□ 2.63
SSBP3-202ENST00000357475 CIAO1O76071 339 aa31.46■■■□□ 2.63
SSBP3-202ENST00000357475 G3BP1Q13283 466 aaKnown RBP eCLIP31.46■■■□□ 2.63
SSBP3-202ENST00000357475 OS9Q13438 667 aaPredicted RBP31.46■■■□□ 2.63
SSBP3-202ENST00000357475 ZNF219Q9P2Y4 722 aaPredicted RBP31.46■■■□□ 2.63
SSBP3-202ENST00000357475 SMC5Q8IY18 1101 aa31.45■■■□□ 2.63
SSBP3-202ENST00000357475 TTLL6Q8N841 843 aa31.45■■■□□ 2.63
SSBP3-202ENST00000357475 HELBQ8NG08 1087 aaPredicted RBP31.45■■■□□ 2.63
SSBP3-202ENST00000357475 MINPP1Q9UNW1 487 aa31.45■■■□□ 2.63
SSBP3-202ENST00000357475 PIM2Q9P1W9 311 aa31.44■■■□□ 2.62
SSBP3-202ENST00000357475 CHRNDQ07001 517 aa31.44■■■□□ 2.62
SSBP3-202ENST00000357475 WTIPA6NIX2 430 aaPredicted RBP31.43■■■□□ 2.62
SSBP3-202ENST00000357475 SMARCA5O60264 1052 aaPredicted RBP31.43■■■□□ 2.62
SSBP3-202ENST00000357475 IL15P40933 162 aaPredicted RBP31.43■■■□□ 2.62
SSBP3-202ENST00000357475 TFCP2Q12800 502 aa31.43■■■□□ 2.62
SSBP3-202ENST00000357475 FBXO3Q9UK99 471 aa31.43■■■□□ 2.62
SSBP3-202ENST00000357475 LTBP1Q14766 1721 aa31.42■■■□□ 2.62
SSBP3-202ENST00000357475 TAF5LO75529 589 aa31.42■■■□□ 2.62
SSBP3-202ENST00000357475 C7orf43Q8WVR3 580 aa31.42■■■□□ 2.62
SSBP3-202ENST00000357475 GCC1Q96CN9 775 aa31.42■■■□□ 2.62
SSBP3-202ENST00000357475 BCL11AQ9H165 835 aa31.42■■■□□ 2.62
SSBP3-202ENST00000357475 ATP6V0A2Q9Y487 856 aa31.42■■■□□ 2.62
SSBP3-202ENST00000357475 SNAP23O00161 211 aa31.41■■■□□ 2.62
SSBP3-202ENST00000357475 METTL24Q5JXM2 366 aa31.41■■■□□ 2.62
SSBP3-202ENST00000357475 VGLL2Q8N8G2 317 aa31.41■■■□□ 2.62
SSBP3-202ENST00000357475 RHPN1Q8TCX5 695 aa31.4■■■□□ 2.62
SSBP3-202ENST00000357475 IL1RAPL2Q9NP60 686 aa31.4■■■□□ 2.62
SSBP3-202ENST00000357475 C21orf2O43822 256 aa31.39■■■□□ 2.62
SSBP3-202ENST00000357475 GPSM2P81274 684 aa31.39■■■□□ 2.62
SSBP3-202ENST00000357475 HSP90AB4PQ58FF6 505 aa31.39■■■□□ 2.62
SSBP3-202ENST00000357475 SP8Q8IXZ3 490 aa31.39■■■□□ 2.62
SSBP3-202ENST00000357475 MROH5Q6ZUA9 1318 aa31.39■■■□□ 2.62
SSBP3-202ENST00000357475 RAB11FIP3O75154 756 aa31.39■■■□□ 2.61
SSBP3-202ENST00000357475 DALRD3Q5D0E6 543 aaKnown RBP31.39■■■□□ 2.61
SSBP3-202ENST00000357475 ANKRD45Q5TZF3 282 aa31.38■■■□□ 2.61
SSBP3-202ENST00000357475 CENPQQ7L2Z9 268 aaPredicted RBP31.38■■■□□ 2.61
SSBP3-202ENST00000357475 ARFGEF1Q9Y6D6 1849 aa31.37■■■□□ 2.61
SSBP3-202ENST00000357475 DUOX1Q9NRD9 1551 aa31.37■■■□□ 2.61
SSBP3-202ENST00000357475 TMC4Q7Z404 712 aa31.37■■■□□ 2.61
SSBP3-202ENST00000357475 KIF1BPQ96EK5 621 aa31.37■■■□□ 2.61
SSBP3-202ENST00000357475 BCS1LQ9Y276 419 aa31.37■■■□□ 2.61
SSBP3-202ENST00000357475 SNED1Q8TER0 1413 aa31.37■■■□□ 2.61
SSBP3-202ENST00000357475 ERC1Q8IUD2 1116 aa31.36■■■□□ 2.61
SSBP3-202ENST00000357475 LRRCC1Q9C099 1032 aa31.36■■■□□ 2.61
SSBP3-202ENST00000357475 CEP126Q9P2H0 1117 aa31.36■■■□□ 2.61
SSBP3-202ENST00000357475 PDE8BO95263 885 aa31.35■■■□□ 2.61
SSBP3-202ENST00000357475 SKAP1Q86WV1 359 aa31.34■■■□□ 2.61
SSBP3-202ENST00000357475 NSFL1CQ9UNZ2 370 aaKnown RBP31.34■■■□□ 2.61
SSBP3-202ENST00000357475 ZNF609O15014 1411 aa31.33■■■□□ 2.61
SSBP3-202ENST00000357475 NUCB1Q02818 461 aa31.33■■■□□ 2.61
SSBP3-202ENST00000357475 GPR101Q96P66 508 aaPredicted RBP31.33■■■□□ 2.61
SSBP3-202ENST00000357475 LNPKQ9C0E8 428 aa31.33■■■□□ 2.61
SSBP3-202ENST00000357475 ANKIB1Q9P2G1 1089 aa31.33■■■□□ 2.61
SSBP3-202ENST00000357475 C16orf71Q8IYS4 520 aaPredicted RBP31.32■■■□□ 2.6
SSBP3-202ENST00000357475 EAF2Q96CJ1 260 aaPredicted RBP31.32■■■□□ 2.6
SSBP3-202ENST00000357475 ANKRD2Q9GZV1 360 aa31.32■■■□□ 2.6
SSBP3-202ENST00000357475 UTRNP46939 3433 aa31.32■■■□□ 2.6
SSBP3-202ENST00000357475 ARAP2Q8WZ64 1704 aa31.31■■■□□ 2.6
SSBP3-202ENST00000357475 XDHP47989 1333 aa31.31■■■□□ 2.6
SSBP3-202ENST00000357475 TIMM10P62072 90 aa31.31■■■□□ 2.6
SSBP3-202ENST00000357475 TNNI3KQ59H18 835 aa31.31■■■□□ 2.6
SSBP3-202ENST00000357475 FPGT-TNNI3KV9GXZ4 949 aa31.31■■■□□ 2.6
SSBP3-202ENST00000357475 FGFR2P21802 821 aa31.3■■■□□ 2.6
SSBP3-202ENST00000357475 KLRK1P26718 216 aa31.3■■■□□ 2.6
SSBP3-202ENST00000357475 TLR7Q9NYK1 1049 aaKnown RBP31.3■■■□□ 2.6
SSBP3-202ENST00000357475 POLLQ9UGP5 575 aa31.3■■■□□ 2.6
SSBP3-202ENST00000357475 FER1L6Q2WGJ9 1857 aa31.3■■■□□ 2.6
SSBP3-202ENST00000357475 CHD1LQ86WJ1 897 aa31.29■■■□□ 2.6
SSBP3-202ENST00000357475 MPNDQ8N594 471 aa31.29■■■□□ 2.6
SSBP3-202ENST00000357475 OTUD7AQ8TE49 926 aaPredicted RBP31.29■■■□□ 2.6
SSBP3-202ENST00000357475 PODXL2Q9NZ53 605 aa31.29■■■□□ 2.6
SSBP3-202ENST00000357475 A0A1B0GUL7 405 aa31.29■■■□□ 2.6
SSBP3-202ENST00000357475 PUM3Q15397 648 aaKnown RBP31.29■■■□□ 2.6
SSBP3-202ENST00000357475 ATP2B3Q16720 1220 aa31.29■■■□□ 2.6
SSBP3-202ENST00000357475 CCDC8Q9H0W5 538 aaPredicted RBP31.29■■■□□ 2.6
SSBP3-202ENST00000357475 UFL1O94874 794 aa31.28■■■□□ 2.6
SSBP3-202ENST00000357475 ADORA1P30542 326 aa31.28■■■□□ 2.6
SSBP3-202ENST00000357475 AACSQ86V21 672 aa31.28■■■□□ 2.6
SSBP3-202ENST00000357475 TBC1D16Q8TBP0 767 aa31.28■■■□□ 2.6
SSBP3-202ENST00000357475 ZNF804BA4D1E1 1349 aa31.27■■■□□ 2.6
SSBP3-202ENST00000357475 CCDC93Q567U6 631 aa31.27■■■□□ 2.6
SSBP3-202ENST00000357475 DPP8Q6V1X1 898 aaPredicted RBP31.27■■■□□ 2.6
SSBP3-202ENST00000357475 YBX3P16989 372 aaKnown RBP eCLIP31.26■■■□□ 2.59
SSBP3-202ENST00000357475 CLASRPQ8N2M8 674 aaKnown RBP31.26■■■□□ 2.59
SSBP3-202ENST00000357475 TMX4Q9H1E5 349 aaPredicted RBP31.26■■■□□ 2.59
SSBP3-202ENST00000357475 GPR108Q9NPR9 543 aa31.26■■■□□ 2.59
SSBP3-202ENST00000357475 GGA1Q9UJY5 639 aa31.26■■■□□ 2.59
SSBP3-202ENST00000357475 IRS2Q9Y4H2 1338 aa31.26■■■□□ 2.59
SSBP3-202ENST00000357475 PDE4AP27815 886 aa31.25■■■□□ 2.59
SSBP3-202ENST00000357475 KCNJ4P48050 445 aa31.25■■■□□ 2.59
SSBP3-202ENST00000357475 TXNRD3Q86VQ6 643 aa31.25■■■□□ 2.59
SSBP3-202ENST00000357475 NEUROD6Q96NK8 337 aa31.25■■■□□ 2.59
SSBP3-202ENST00000357475 ATP2B4P23634 1241 aa31.24■■■□□ 2.59
SSBP3-202ENST00000357475 UBE4AQ14139 1066 aa31.24■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms