RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 CNBD1Q8NA66 436 aa14.28□□□□□ -0.12
COLCA1-201ENST00000355430 CHAMP1Q96JM3 812 aa14.28□□□□□ -0.12
COLCA1-201ENST00000355430 PDE4CQ08493 712 aa14.28□□□□□ -0.12
COLCA1-201ENST00000355430 KIF1BO60333 1816 aa14.28□□□□□ -0.12
COLCA1-201ENST00000355430 SBNO1A3KN83 1393 aa14.28□□□□□ -0.12
COLCA1-201ENST00000355430 DTNBO60941 627 aa14.28□□□□□ -0.12
COLCA1-201ENST00000355430 ZNF444Q8N0Y2 327 aaPredicted RBP14.28□□□□□ -0.12
COLCA1-201ENST00000355430 SNX14Q9Y5W7 946 aa14.28□□□□□ -0.12
COLCA1-201ENST00000355430 KIF24Q5T7B8 1368 aa14.27□□□□□ -0.12
COLCA1-201ENST00000355430 GOLGA8BA8MQT2 603 aa14.27□□□□□ -0.12
COLCA1-201ENST00000355430 RUFY3Q7L099 469 aa14.27□□□□□ -0.12
COLCA1-201ENST00000355430 RAB11FIP4Q86YS3 637 aa14.27□□□□□ -0.12
COLCA1-201ENST00000355430 GRM1Q13255 1194 aa14.27□□□□□ -0.12
COLCA1-201ENST00000355430 PPP1R9BQ96SB3 815 aa14.27□□□□□ -0.12
COLCA1-201ENST00000355430 Q6ZUG5 572 aa14.27□□□□□ -0.13
COLCA1-201ENST00000355430 COPS6Q7L5N1 327 aa14.27□□□□□ -0.13
COLCA1-201ENST00000355430 ZSCAN16Q9H4T2 348 aaPredicted RBP14.27□□□□□ -0.13
COLCA1-201ENST00000355430 ZNF76P36508 570 aa14.27□□□□□ -0.13
COLCA1-201ENST00000355430 GPT2Q8TD30 523 aa14.27□□□□□ -0.13
COLCA1-201ENST00000355430 RUFY1Q96T51 708 aa14.27□□□□□ -0.13
COLCA1-201ENST00000355430 UNC13BO14795 1591 aa14.27□□□□□ -0.13
COLCA1-201ENST00000355430 URI1O94763 535 aaPredicted RBP14.26□□□□□ -0.13
COLCA1-201ENST00000355430 ISM2Q6H9L7 571 aa14.26□□□□□ -0.13
COLCA1-201ENST00000355430 C17orf53Q8N3J3 647 aaPredicted RBP14.26□□□□□ -0.13
COLCA1-201ENST00000355430 UQCRFS1P1P0C7P4 283 aa14.26□□□□□ -0.13
COLCA1-201ENST00000355430 ERCC4Q92889 916 aaPredicted RBP14.26□□□□□ -0.13
COLCA1-201ENST00000355430 RNMTO43148 476 aaKnown RBP14.26□□□□□ -0.13
COLCA1-201ENST00000355430 GSDMDP57764 484 aa14.26□□□□□ -0.13
COLCA1-201ENST00000355430 SETQ01105 290 aaPredicted RBP14.26□□□□□ -0.13
COLCA1-201ENST00000355430 TMCO3Q6UWJ1 677 aa14.26□□□□□ -0.13
COLCA1-201ENST00000355430 NAPBQ9H115 298 aa14.26□□□□□ -0.13
COLCA1-201ENST00000355430 PAXBP1Q9Y5B6 917 aa14.26□□□□□ -0.13
COLCA1-201ENST00000355430 NOM1Q5C9Z4 860 aaKnown RBP14.26□□□□□ -0.13
COLCA1-201ENST00000355430 LUZP1Q86V48 1076 aa14.26□□□□□ -0.13
COLCA1-201ENST00000355430 RTL1A6NKG5 1358 aa14.25□□□□□ -0.13
COLCA1-201ENST00000355430 CLTCL1P53675 1640 aa14.25□□□□□ -0.13
COLCA1-201ENST00000355430 GRM8O00222 908 aa14.25□□□□□ -0.13
COLCA1-201ENST00000355430 KRT18P05783 430 aaKnown RBP14.25□□□□□ -0.13
COLCA1-201ENST00000355430 HAND2P61296 217 aa14.25□□□□□ -0.13
COLCA1-201ENST00000355430 CWF19L2Q2TBE0 894 aaKnown RBP14.25□□□□□ -0.13
COLCA1-201ENST00000355430 TMX1Q9H3N1 280 aa14.25□□□□□ -0.13
COLCA1-201ENST00000355430 ALDH1L1O75891 902 aa14.25□□□□□ -0.13
COLCA1-201ENST00000355430 KSR2Q6VAB6 950 aa14.25□□□□□ -0.13
COLCA1-201ENST00000355430 FAM196AQ6ZSG2 479 aa14.25□□□□□ -0.13
COLCA1-201ENST00000355430 WWC3Q9ULE0 1092 aa14.25□□□□□ -0.13
COLCA1-201ENST00000355430 MINDY4BA8MYZ0 360 aa14.25□□□□□ -0.13
COLCA1-201ENST00000355430 TOP1P11387 765 aaKnown RBP14.25□□□□□ -0.13
COLCA1-201ENST00000355430 SNW1Q13573 536 aaKnown RBP14.25□□□□□ -0.13
COLCA1-201ENST00000355430 GPR162Q16538 588 aa14.25□□□□□ -0.13
COLCA1-201ENST00000355430 PLEKHG3A1L390 1219 aa14.25□□□□□ -0.13
COLCA1-201ENST00000355430 BRD1O95696 1058 aa14.25□□□□□ -0.13
COLCA1-201ENST00000355430 LEKR1Q6ZMV7 388 aa14.25□□□□□ -0.13
COLCA1-201ENST00000355430 CCDC94Q9BW85 323 aaPredicted RBP14.25□□□□□ -0.13
COLCA1-201ENST00000355430 MAGEC2Q9UBF1 373 aaPredicted RBP14.24□□□□□ -0.13
COLCA1-201ENST00000355430 H0YIN7 160 aa14.24□□□□□ -0.13
COLCA1-201ENST00000355430 CAVIN2O95810 425 aa14.24□□□□□ -0.13
COLCA1-201ENST00000355430 TNIP1Q15025 636 aa14.24□□□□□ -0.13
COLCA1-201ENST00000355430 SEC63Q9UGP8 760 aaKnown RBP14.24□□□□□ -0.13
COLCA1-201ENST00000355430 ANKRD2Q9GZV1 360 aa14.24□□□□□ -0.13
COLCA1-201ENST00000355430 SNRKQ9NRH2 765 aa14.24□□□□□ -0.13
COLCA1-201ENST00000355430 ZSCAN12O43309 604 aa14.24□□□□□ -0.13
COLCA1-201ENST00000355430 PARP10Q53GL7 1025 aa14.24□□□□□ -0.13
COLCA1-201ENST00000355430 PALD1Q9ULE6 856 aa14.24□□□□□ -0.13
COLCA1-201ENST00000355430 USP16Q9Y5T5 823 aa14.24□□□□□ -0.13
COLCA1-201ENST00000355430 ZNF213O14771 459 aa14.24□□□□□ -0.13
COLCA1-201ENST00000355430 SKILP12757 684 aa14.24□□□□□ -0.13
COLCA1-201ENST00000355430 RNF41Q9H4P4 317 aaPredicted RBP14.24□□□□□ -0.13
COLCA1-201ENST00000355430 CCDC171Q6TFL3 1326 aa14.23□□□□□ -0.13
COLCA1-201ENST00000355430 CASQ1P31415 396 aa14.23□□□□□ -0.13
COLCA1-201ENST00000355430 PIP4K2AP48426 406 aaPredicted RBP14.23□□□□□ -0.13
COLCA1-201ENST00000355430 WASF1Q92558 559 aa14.23□□□□□ -0.13
COLCA1-201ENST00000355430 MPHOSPH6Q99547 160 aaKnown RBP14.23□□□□□ -0.13
COLCA1-201ENST00000355430 MADDQ8WXG6 1647 aa14.23□□□□□ -0.13
COLCA1-201ENST00000355430 SGSM2O43147 1006 aa14.23□□□□□ -0.13
COLCA1-201ENST00000355430 CLASP1Q7Z460 1538 aa14.23□□□□□ -0.13
COLCA1-201ENST00000355430 CCDC96Q2M329 555 aa14.23□□□□□ -0.13
COLCA1-201ENST00000355430 CERKQ8TCT0 537 aa14.23□□□□□ -0.13
COLCA1-201ENST00000355430 ORC3Q9UBD5 711 aaPredicted RBP14.23□□□□□ -0.13
COLCA1-201ENST00000355430 AOPEPQ8N6M6 819 aa14.22□□□□□ -0.13
COLCA1-201ENST00000355430 AOX1Q06278 1338 aa14.22□□□□□ -0.13
COLCA1-201ENST00000355430 NSFL1CQ9UNZ2 370 aaKnown RBP14.22□□□□□ -0.13
COLCA1-201ENST00000355430 ERLIN1O75477 346 aa14.22□□□□□ -0.13
COLCA1-201ENST00000355430 EIF6P56537 245 aaKnown RBP14.22□□□□□ -0.13
COLCA1-201ENST00000355430 SIRT2Q8IXJ6 389 aa14.22□□□□□ -0.13
COLCA1-201ENST00000355430 CCDC144CPQ8IYA2 1237 aa14.22□□□□□ -0.13
COLCA1-201ENST00000355430 RAD50Q92878 1312 aa14.22□□□□□ -0.13
COLCA1-201ENST00000355430 KIAA0232Q92628 1395 aa14.22□□□□□ -0.13
COLCA1-201ENST00000355430 TET3O43151 1660 aa14.22□□□□□ -0.13
COLCA1-201ENST00000355430 SKIDA1Q1XH10 827 aa14.21□□□□□ -0.13
COLCA1-201ENST00000355430 MCMDC2Q4G0Z9 681 aa14.21□□□□□ -0.13
COLCA1-201ENST00000355430 KRT27Q7Z3Y8 459 aa14.21□□□□□ -0.13
COLCA1-201ENST00000355430 IQCA1Q86XH1 822 aa14.21□□□□□ -0.13
COLCA1-201ENST00000355430 CNNM3Q8NE01 707 aa14.21□□□□□ -0.13
COLCA1-201ENST00000355430 EHMT1Q9H9B1 1298 aa14.21□□□□□ -0.13
COLCA1-201ENST00000355430 MAP3K4Q9Y6R4 1608 aa14.21□□□□□ -0.13
COLCA1-201ENST00000355430 HSPA4P34932 840 aa14.21□□□□□ -0.13
COLCA1-201ENST00000355430 EPS15P42566 896 aa14.21□□□□□ -0.13
COLCA1-201ENST00000355430 FAM173BQ6P4H8 233 aa14.21□□□□□ -0.13
COLCA1-201ENST00000355430 SUPT20HQ8NEM7 779 aa14.21□□□□□ -0.13
COLCA1-201ENST00000355430 KLHL10Q6JEL2 608 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms