RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 ZKSCAN3Q9BRR0 538 aa14.48□□□□□ -0.09
PCDHB11-201ENST00000354757 ZC3H12CQ9C0D7 883 aaKnown RBP14.48□□□□□ -0.09
PCDHB11-201ENST00000354757 PNPLA6Q8IY17 1366 aa14.48□□□□□ -0.09
PCDHB11-201ENST00000354757 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.48□□□□□ -0.09
PCDHB11-201ENST00000354757 Q6ZUG5 572 aa14.48□□□□□ -0.09
PCDHB11-201ENST00000354757 TMOD2Q9NZR1 351 aa14.48□□□□□ -0.09
PCDHB11-201ENST00000354757 KCNQ2O43526 872 aa14.47□□□□□ -0.09
PCDHB11-201ENST00000354757 ZAP70P43403 619 aa14.47□□□□□ -0.09
PCDHB11-201ENST00000354757 GREM2Q9H772 168 aa14.47□□□□□ -0.09
PCDHB11-201ENST00000354757 SH2B1Q9NRF2 756 aaPredicted RBP14.47□□□□□ -0.09
PCDHB11-201ENST00000354757 ORC3Q9UBD5 711 aaPredicted RBP14.47□□□□□ -0.09
PCDHB11-201ENST00000354757 SETBP1Q9Y6X0 1596 aa14.47□□□□□ -0.09
PCDHB11-201ENST00000354757 NCOA7Q8NI08 942 aa14.47□□□□□ -0.09
PCDHB11-201ENST00000354757 PCMTD1Q96MG8 357 aaPredicted RBP14.47□□□□□ -0.09
PCDHB11-201ENST00000354757 NYXQ9GZU5 481 aa14.47□□□□□ -0.09
PCDHB11-201ENST00000354757 TNMDQ9H2S6 317 aa14.47□□□□□ -0.09
PCDHB11-201ENST00000354757 PODXL2Q9NZ53 605 aa14.47□□□□□ -0.09
PCDHB11-201ENST00000354757 RNF113AO15541 343 aaKnown RBP14.47□□□□□ -0.09
PCDHB11-201ENST00000354757 TPM2P07951 284 aa14.47□□□□□ -0.09
PCDHB11-201ENST00000354757 STX6O43752 255 aa14.46□□□□□ -0.09
PCDHB11-201ENST00000354757 SPC24Q8NBT2 197 aa14.46□□□□□ -0.09
PCDHB11-201ENST00000354757 CDKL5O76039 1030 aa14.46□□□□□ -0.09
PCDHB11-201ENST00000354757 CLCN1P35523 988 aa14.46□□□□□ -0.09
PCDHB11-201ENST00000354757 CTCFLQ8NI51 663 aaPredicted RBP14.46□□□□□ -0.09
PCDHB11-201ENST00000354757 ZNF592Q92610 1267 aa14.46□□□□□ -0.09
PCDHB11-201ENST00000354757 ADGRB1O14514 1584 aa14.46□□□□□ -0.1
PCDHB11-201ENST00000354757 SNAP23O00161 211 aa14.46□□□□□ -0.1
PCDHB11-201ENST00000354757 PRDM1O75626 825 aa14.46□□□□□ -0.1
PCDHB11-201ENST00000354757 SOGA3Q5TF21 947 aa14.46□□□□□ -0.1
PCDHB11-201ENST00000354757 TRIM5Q9C035 493 aa14.46□□□□□ -0.1
PCDHB11-201ENST00000354757 MBD4O95243 580 aa14.45□□□□□ -0.1
PCDHB11-201ENST00000354757 APOBRQ0VD83 1088 aa14.45□□□□□ -0.1
PCDHB11-201ENST00000354757 PARP10Q53GL7 1025 aa14.45□□□□□ -0.1
PCDHB11-201ENST00000354757 HOMER1Q86YM7 354 aa14.45□□□□□ -0.1
PCDHB11-201ENST00000354757 KDRP35968 1356 aa14.45□□□□□ -0.1
PCDHB11-201ENST00000354757 CCDC171Q6TFL3 1326 aa14.45□□□□□ -0.1
PCDHB11-201ENST00000354757 HMGB1P09429 215 aaKnown RBP14.45□□□□□ -0.1
PCDHB11-201ENST00000354757 RBM27Q9P2N5 1060 aaKnown RBP14.45□□□□□ -0.1
PCDHB11-201ENST00000354757 LRRC7Q96NW7 1537 aa14.45□□□□□ -0.1
PCDHB11-201ENST00000354757 ZFYP08048 801 aaPredicted RBP14.45□□□□□ -0.1
PCDHB11-201ENST00000354757 FAM196AQ6ZSG2 479 aa14.45□□□□□ -0.1
PCDHB11-201ENST00000354757 NOC3LQ8WTT2 800 aaKnown RBP14.45□□□□□ -0.1
PCDHB11-201ENST00000354757 CCDC43Q96MW1 224 aaKnown RBP14.45□□□□□ -0.1
PCDHB11-201ENST00000354757 PARP3Q9Y6F1 533 aa14.45□□□□□ -0.1
PCDHB11-201ENST00000354757 PREX1Q8TCU6 1659 aa14.45□□□□□ -0.1
PCDHB11-201ENST00000354757 BAG4O95429 457 aaKnown RBP14.44□□□□□ -0.1
PCDHB11-201ENST00000354757 SLC26A6Q9BXS9 759 aa14.44□□□□□ -0.1
PCDHB11-201ENST00000354757 MCM5P33992 734 aa14.44□□□□□ -0.1
PCDHB11-201ENST00000354757 BRPF1P55201 1214 aaPredicted RBP14.44□□□□□ -0.1
PCDHB11-201ENST00000354757 CCDC96Q2M329 555 aa14.44□□□□□ -0.1
PCDHB11-201ENST00000354757 CKAP2LQ8IYA6 745 aa14.44□□□□□ -0.1
PCDHB11-201ENST00000354757 SEC31BQ9NQW1 1179 aa14.44□□□□□ -0.1
PCDHB11-201ENST00000354757 UFL1O94874 794 aa14.44□□□□□ -0.1
PCDHB11-201ENST00000354757 TSPY26PQ9H489 355 aa14.44□□□□□ -0.1
PCDHB11-201ENST00000354757 HOOK1Q9UJC3 728 aaKnown RBP14.44□□□□□ -0.1
PCDHB11-201ENST00000354757 SGSM2O43147 1006 aa14.44□□□□□ -0.1
PCDHB11-201ENST00000354757 BAG3O95817 575 aa14.44□□□□□ -0.1
PCDHB11-201ENST00000354757 SSBP05455 408 aaKnown RBP eCLIP14.44□□□□□ -0.1
PCDHB11-201ENST00000354757 METAP2P50579 478 aaKnown RBP eCLIP14.44□□□□□ -0.1
PCDHB11-201ENST00000354757 DHX8Q14562 1220 aaKnown RBP14.44□□□□□ -0.1
PCDHB11-201ENST00000354757 PI16Q6UXB8 463 aa14.44□□□□□ -0.1
PCDHB11-201ENST00000354757 GIGYF2Q6Y7W6 1299 aaKnown RBP14.44□□□□□ -0.1
PCDHB11-201ENST00000354757 ZHX3Q9H4I2 956 aa14.44□□□□□ -0.1
PCDHB11-201ENST00000354757 RNF41Q9H4P4 317 aaPredicted RBP14.44□□□□□ -0.1
PCDHB11-201ENST00000354757 ARMT1Q9H993 441 aa14.44□□□□□ -0.1
PCDHB11-201ENST00000354757 SRP68Q9UHB9 627 aaKnown RBP14.44□□□□□ -0.1
PCDHB11-201ENST00000354757 GYG1P46976 350 aa14.43□□□□□ -0.1
PCDHB11-201ENST00000354757 HLFQ16534 295 aa14.43□□□□□ -0.1
PCDHB11-201ENST00000354757 EPHA10Q5JZY3 1008 aa14.43□□□□□ -0.1
PCDHB11-201ENST00000354757 RBM26Q5T8P6 1007 aaKnown RBP14.43□□□□□ -0.1
PCDHB11-201ENST00000354757 TRMT1LQ7Z2T5 733 aaKnown RBP14.43□□□□□ -0.1
PCDHB11-201ENST00000354757 MCM9Q9NXL9 1143 aa14.43□□□□□ -0.1
PCDHB11-201ENST00000354757 PRC1O43663 620 aa14.43□□□□□ -0.1
PCDHB11-201ENST00000354757 IARSP41252 1262 aaKnown RBP14.43□□□□□ -0.1
PCDHB11-201ENST00000354757 CTSWP56202 376 aa14.43□□□□□ -0.1
PCDHB11-201ENST00000354757 PUM3Q15397 648 aaKnown RBP14.43□□□□□ -0.1
PCDHB11-201ENST00000354757 HMG20BQ9P0W2 317 aa14.43□□□□□ -0.1
PCDHB11-201ENST00000354757 CFAP45Q9UL16 551 aa14.43□□□□□ -0.1
PCDHB11-201ENST00000354757 MAP3K15Q6ZN16 1313 aa14.43□□□□□ -0.1
PCDHB11-201ENST00000354757 CDC42BPGQ6DT37 1551 aa14.43□□□□□ -0.1
PCDHB11-201ENST00000354757 PALD1Q9ULE6 856 aa14.43□□□□□ -0.1
PCDHB11-201ENST00000354757 KIF24Q5T7B8 1368 aa14.43□□□□□ -0.1
PCDHB11-201ENST00000354757 IGKV5-2P06315 115 aa14.42□□□□□ -0.1
PCDHB11-201ENST00000354757 LDHCP07864 332 aa14.42□□□□□ -0.1
PCDHB11-201ENST00000354757 ADORA1P30542 326 aa14.42□□□□□ -0.1
PCDHB11-201ENST00000354757 CRNKL1Q9BZJ0 848 aaKnown RBP14.42□□□□□ -0.1
PCDHB11-201ENST00000354757 MROH2AA6NES4 1674 aa14.42□□□□□ -0.1
PCDHB11-201ENST00000354757 A0A0D9SFI3 127 aa14.42□□□□□ -0.1
PCDHB11-201ENST00000354757 JMYQ8N9B5 988 aa14.42□□□□□ -0.1
PCDHB11-201ENST00000354757 ZBTB38Q8NAP3 1195 aaPredicted RBP14.42□□□□□ -0.1
PCDHB11-201ENST00000354757 MYO3AQ8NEV4 1616 aa14.42□□□□□ -0.1
PCDHB11-201ENST00000354757 HEG1Q9ULI3 1381 aa14.42□□□□□ -0.1
PCDHB11-201ENST00000354757 TNS3Q68CZ2 1445 aa14.42□□□□□ -0.1
PCDHB11-201ENST00000354757 FAM173BQ6P4H8 233 aa14.42□□□□□ -0.1
PCDHB11-201ENST00000354757 SEPT12Q8IYM1 358 aa14.42□□□□□ -0.1
PCDHB11-201ENST00000354757 DBNLQ9UJU6 430 aaKnown RBP14.42□□□□□ -0.1
PCDHB11-201ENST00000354757 TRPC5Q9UL62 973 aaPredicted RBP14.42□□□□□ -0.1
PCDHB11-201ENST00000354757 MAGEB6P1A0A0J9YX57 407 aa14.41□□□□□ -0.1
PCDHB11-201ENST00000354757 NUP62CLQ9H1M0 184 aa14.41□□□□□ -0.1
PCDHB11-201ENST00000354757 GPAA1O43292 621 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms