RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 JAK2O60674 1132 aa13.39□□□□□ -0.27
CAPN9-202ENST00000354537 COL9A3Q14050 684 aaPredicted RBP13.39□□□□□ -0.27
CAPN9-202ENST00000354537 PROSER3Q2NL68 480 aa13.39□□□□□ -0.27
CAPN9-202ENST00000354537 MCMDC2Q4G0Z9 681 aa13.39□□□□□ -0.27
CAPN9-202ENST00000354537 CREBRFQ8IUR6 639 aa13.39□□□□□ -0.27
CAPN9-202ENST00000354537 CCAR1Q8IX12 1150 aaKnown RBP13.39□□□□□ -0.27
CAPN9-202ENST00000354537 THEMISQ8N1K5 641 aaPredicted RBP13.39□□□□□ -0.27
CAPN9-202ENST00000354537 ENGASEQ8NFI3 743 aa13.39□□□□□ -0.27
CAPN9-202ENST00000354537 AGXT2Q9BYV1 514 aa13.39□□□□□ -0.27
CAPN9-202ENST00000354537 OSBPL5Q9H0X9 879 aaPredicted RBP13.39□□□□□ -0.27
CAPN9-202ENST00000354537 FAM53CQ9NYF3 392 aa13.39□□□□□ -0.27
CAPN9-202ENST00000354537 TAF6LQ9Y6J9 622 aa13.39□□□□□ -0.27
CAPN9-202ENST00000354537 BECN2A8MW95 431 aa13.38□□□□□ -0.27
CAPN9-202ENST00000354537 FAM160A1Q05DH4 1040 aa13.38□□□□□ -0.27
CAPN9-202ENST00000354537 NEXNQ0ZGT2 675 aa13.38□□□□□ -0.27
CAPN9-202ENST00000354537 STK3Q13188 491 aa13.38□□□□□ -0.27
CAPN9-202ENST00000354537 KIF18AQ8NI77 898 aa13.38□□□□□ -0.27
CAPN9-202ENST00000354537 TCEANC2Q96MN5 208 aa13.38□□□□□ -0.27
CAPN9-202ENST00000354537 BPIFA3Q9BQP9 254 aa13.38□□□□□ -0.27
CAPN9-202ENST00000354537 PHF8Q9UPP1 1060 aa13.38□□□□□ -0.27
CAPN9-202ENST00000354537 SIPA1L3O60292 1781 aaPredicted RBP13.38□□□□□ -0.27
CAPN9-202ENST00000354537 SKILP12757 684 aa13.38□□□□□ -0.27
CAPN9-202ENST00000354537 SNW1Q13573 536 aaKnown RBP13.38□□□□□ -0.27
CAPN9-202ENST00000354537 MPRIPQ6WCQ1 1025 aa13.38□□□□□ -0.27
CAPN9-202ENST00000354537 CEP57L1Q8IYX8 460 aa13.38□□□□□ -0.27
CAPN9-202ENST00000354537 RGS22Q8NE09 1264 aa13.38□□□□□ -0.27
CAPN9-202ENST00000354537 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.38□□□□□ -0.27
CAPN9-202ENST00000354537 SH3TC1Q8TE82 1336 aa13.37□□□□□ -0.27
CAPN9-202ENST00000354537 KINO60870 393 aaKnown RBP13.37□□□□□ -0.27
CAPN9-202ENST00000354537 DTNBO60941 627 aa13.37□□□□□ -0.27
CAPN9-202ENST00000354537 SCRN1Q12765 414 aa13.37□□□□□ -0.27
CAPN9-202ENST00000354537 C11orf57Q6ZUT1 292 aaPredicted RBP13.37□□□□□ -0.27
CAPN9-202ENST00000354537 DHX32Q7L7V1 743 aaKnown RBP13.37□□□□□ -0.27
CAPN9-202ENST00000354537 DHX40Q8IX18 779 aaKnown RBP13.37□□□□□ -0.27
CAPN9-202ENST00000354537 CCAR2Q8N163 923 aaKnown RBP13.37□□□□□ -0.27
CAPN9-202ENST00000354537 NSUN7Q8NE18 718 aaKnown RBP13.37□□□□□ -0.27
CAPN9-202ENST00000354537 MYH15Q9Y2K3 1946 aa13.37□□□□□ -0.27
CAPN9-202ENST00000354537 A0A1W2PQ27 194 aa13.37□□□□□ -0.27
CAPN9-202ENST00000354537 A0A1W2PQ64 194 aa13.37□□□□□ -0.27
CAPN9-202ENST00000354537 A0A1W2PQD8 194 aa13.37□□□□□ -0.27
CAPN9-202ENST00000354537 CCDC69A6NI79 296 aa13.37□□□□□ -0.27
CAPN9-202ENST00000354537 IGKV5-2P06315 115 aa13.37□□□□□ -0.27
CAPN9-202ENST00000354537 HSP90B1P14625 803 aaKnown RBP13.37□□□□□ -0.27
CAPN9-202ENST00000354537 CCZ1BP86790 482 aa13.37□□□□□ -0.27
CAPN9-202ENST00000354537 CCZ1P86791 482 aaPredicted RBP13.37□□□□□ -0.27
CAPN9-202ENST00000354537 PDIA6Q15084 440 aa13.37□□□□□ -0.27
CAPN9-202ENST00000354537 FBXL16Q8N461 479 aa13.37□□□□□ -0.27
CAPN9-202ENST00000354537 HAUS7Q99871 368 aa13.37□□□□□ -0.27
CAPN9-202ENST00000354537 CAMTA1Q9Y6Y1 1673 aa13.37□□□□□ -0.27
CAPN9-202ENST00000354537 NEURL1BA8MQ27 555 aa13.36□□□□□ -0.27
CAPN9-202ENST00000354537 GCKRQ14397 625 aa13.36□□□□□ -0.27
CAPN9-202ENST00000354537 TNNI3KQ59H18 835 aa13.36□□□□□ -0.27
CAPN9-202ENST00000354537 FPGT-TNNI3KV9GXZ4 949 aa13.36□□□□□ -0.27
CAPN9-202ENST00000354537 CYP21A2P08686 494 aa13.36□□□□□ -0.27
CAPN9-202ENST00000354537 EXOSC10Q01780 885 aaKnown RBP13.36□□□□□ -0.27
CAPN9-202ENST00000354537 KRT222Q8N1A0 295 aa13.36□□□□□ -0.27
CAPN9-202ENST00000354537 ZNF274Q96GC6 653 aaPredicted RBP13.36□□□□□ -0.27
CAPN9-202ENST00000354537 METTL22Q9BUU2 404 aaPredicted RBP13.36□□□□□ -0.27
CAPN9-202ENST00000354537 DSCC1Q9BVC3 393 aa13.36□□□□□ -0.27
CAPN9-202ENST00000354537 HELLSQ9NRZ9 838 aa13.36□□□□□ -0.27
CAPN9-202ENST00000354537 SALL1Q9NSC2 1324 aa13.35□□□□□ -0.27
CAPN9-202ENST00000354537 ZNF609O15014 1411 aa13.35□□□□□ -0.27
CAPN9-202ENST00000354537 PSDA5PKW4 1024 aaPredicted RBP13.35□□□□□ -0.27
CAPN9-202ENST00000354537 SLU7O95391 586 aaKnown RBP13.35□□□□□ -0.27
CAPN9-202ENST00000354537 RFX5P48382 616 aaPredicted RBP13.35□□□□□ -0.27
CAPN9-202ENST00000354537 RABL6Q3YEC7 729 aaPredicted RBP13.35□□□□□ -0.27
CAPN9-202ENST00000354537 RIC3Q7Z5B4 369 aa13.35□□□□□ -0.27
CAPN9-202ENST00000354537 CCDC150Q8NCX0 1101 aa13.35□□□□□ -0.27
CAPN9-202ENST00000354537 GOLPH3LQ9H4A5 285 aa13.35□□□□□ -0.27
CAPN9-202ENST00000354537 RTEL1Q9NZ71 1219 aa13.35□□□□□ -0.27
CAPN9-202ENST00000354537 DBNLQ9UJU6 430 aaKnown RBP13.35□□□□□ -0.27
CAPN9-202ENST00000354537 PALLDQ8WX93 1383 aa13.35□□□□□ -0.27
CAPN9-202ENST00000354537 ADALQ6DHV7 355 aa13.34□□□□□ -0.27
CAPN9-202ENST00000354537 L2HGDHQ9H9P8 463 aa13.34□□□□□ -0.27
CAPN9-202ENST00000354537 TMEM94Q12767 1356 aa13.34□□□□□ -0.27
CAPN9-202ENST00000354537 PXDNQ92626 1479 aa13.34□□□□□ -0.27
CAPN9-202ENST00000354537 SLIT3O75094 1523 aa13.34□□□□□ -0.27
CAPN9-202ENST00000354537 PTPDC1A2A3K4 754 aa13.34□□□□□ -0.27
CAPN9-202ENST00000354537 SLFN14P0C7P3 912 aa13.34□□□□□ -0.27
CAPN9-202ENST00000354537 KCNA6P17658 529 aa13.34□□□□□ -0.27
CAPN9-202ENST00000354537 KBTBD3Q8NAB2 608 aa13.34□□□□□ -0.27
CAPN9-202ENST00000354537 SIL1Q9H173 461 aa13.34□□□□□ -0.27
CAPN9-202ENST00000354537 ZNF215Q9UL58 517 aaPredicted RBP13.34□□□□□ -0.27
CAPN9-202ENST00000354537 CTDNEP1O95476 244 aa13.33□□□□□ -0.28
CAPN9-202ENST00000354537 EVCP57679 992 aa13.33□□□□□ -0.28
CAPN9-202ENST00000354537 FGD1P98174 961 aa13.33□□□□□ -0.28
CAPN9-202ENST00000354537 FMR1NBQ8N0W7 255 aaPredicted RBP13.33□□□□□ -0.28
CAPN9-202ENST00000354537 MRPS27Q92552 414 aaKnown RBP13.33□□□□□ -0.28
CAPN9-202ENST00000354537 DDX11Q96FC9 970 aa13.33□□□□□ -0.28
CAPN9-202ENST00000354537 USP28Q96RU2 1077 aa13.33□□□□□ -0.28
CAPN9-202ENST00000354537 GPR108Q9NPR9 543 aa13.33□□□□□ -0.28
CAPN9-202ENST00000354537 CCP110O43303 1012 aa13.33□□□□□ -0.28
CAPN9-202ENST00000354537 NRDCO43847 1150 aa13.33□□□□□ -0.28
CAPN9-202ENST00000354537 PTPN12Q05209 780 aaKnown RBP13.33□□□□□ -0.28
CAPN9-202ENST00000354537 FSIP1Q8NA03 581 aa13.33□□□□□ -0.28
CAPN9-202ENST00000354537 ABCC6O95255 1503 aa13.33□□□□□ -0.28
CAPN9-202ENST00000354537 USP27XA6NNY8 438 aa13.32□□□□□ -0.28
CAPN9-202ENST00000354537 TPM4P67936 248 aa13.32□□□□□ -0.28
CAPN9-202ENST00000354537 KMT5BQ4FZB7 885 aa13.32□□□□□ -0.28
CAPN9-202ENST00000354537 ZNF771Q7L3S4 317 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms