RNA–Protein interactions for RNA: ENST00000354473.4

VPS72-201, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 3

Gene VPS72, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-201ENST00000354473 L3MBTL3Q96JM7 780 aaPredicted RBP23.73■■□□□ 1.39
VPS72-201ENST00000354473 GPR101Q96P66 508 aaPredicted RBP23.73■■□□□ 1.39
VPS72-201ENST00000354473 GGA1Q9UJY5 639 aa23.73■■□□□ 1.39
VPS72-201ENST00000354473 BCAR3O75815 825 aa23.72■■□□□ 1.39
VPS72-201ENST00000354473 CCT4P50991 539 aaKnown RBP23.72■■□□□ 1.39
VPS72-201ENST00000354473 GPC2Q8N158 579 aa23.72■■□□□ 1.39
VPS72-201ENST00000354473 EYA3Q99504 573 aa23.72■■□□□ 1.39
VPS72-201ENST00000354473 ZNRF3Q9ULT6 936 aa23.72■■□□□ 1.39
VPS72-201ENST00000354473 MINPP1Q9UNW1 487 aa23.72■■□□□ 1.39
VPS72-201ENST00000354473 SCN4AP35499 1836 aa23.72■■□□□ 1.39
VPS72-201ENST00000354473 RIMBP2O15034 1052 aa23.71■■□□□ 1.39
VPS72-201ENST00000354473 KAZALD1Q96I82 304 aa23.71■■□□□ 1.39
VPS72-201ENST00000354473 MPHOSPH8Q99549 860 aa23.71■■□□□ 1.39
VPS72-201ENST00000354473 USP44Q9H0E7 712 aa23.71■■□□□ 1.39
VPS72-201ENST00000354473 GJA3Q9Y6H8 435 aa23.71■■□□□ 1.39
VPS72-201ENST00000354473 RBM46Q8TBY0 533 aaKnown RBP23.7■■□□□ 1.38
VPS72-201ENST00000354473 ARHGAP45Q92619 1136 aa23.7■■□□□ 1.38
VPS72-201ENST00000354473 IQCA1LA6NCM1 817 aa23.69■■□□□ 1.38
VPS72-201ENST00000354473 CCDC57Q2TAC2 916 aa23.69■■□□□ 1.38
VPS72-201ENST00000354473 FRAT1Q92837 279 aaPredicted RBP23.69■■□□□ 1.38
VPS72-201ENST00000354473 BICC1Q9H694 974 aaKnown RBP23.69■■□□□ 1.38
VPS72-201ENST00000354473 IPO8O15397 1037 aaKnown RBP23.68■■□□□ 1.38
VPS72-201ENST00000354473 ATP2B4P23634 1241 aa23.68■■□□□ 1.38
VPS72-201ENST00000354473 DBNDD1Q9H9R9 158 aa23.68■■□□□ 1.38
VPS72-201ENST00000354473 YDJCA8MPS7 323 aa23.67■■□□□ 1.38
VPS72-201ENST00000354473 CXCL9Q07325 125 aa23.67■■□□□ 1.38
VPS72-201ENST00000354473 TAF7LQ5H9L4 462 aa23.67■■□□□ 1.38
VPS72-201ENST00000354473 ZC3H12CQ9C0D7 883 aaKnown RBP23.67■■□□□ 1.38
VPS72-201ENST00000354473 A0A1B0GUL6 1792 aa23.67■■□□□ 1.38
VPS72-201ENST00000354473 RAD17O75943 681 aa23.66■■□□□ 1.38
VPS72-201ENST00000354473 TRIM27P14373 513 aa23.66■■□□□ 1.38
VPS72-201ENST00000354473 DOK7Q18PE1 504 aa23.66■■□□□ 1.38
VPS72-201ENST00000354473 ANKRD44Q8N8A2 993 aa23.66■■□□□ 1.38
VPS72-201ENST00000354473 ZNF594Q96JF6 807 aaPredicted RBP23.66■■□□□ 1.38
VPS72-201ENST00000354473 HACL1Q9UJ83 578 aa23.66■■□□□ 1.38
VPS72-201ENST00000354473 WTIPA6NIX2 430 aaPredicted RBP23.65■■□□□ 1.38
VPS72-201ENST00000354473 ECE2O60344 883 aa23.65■■□□□ 1.38
VPS72-201ENST00000354473 RABL6Q3YEC7 729 aaPredicted RBP23.65■■□□□ 1.38
VPS72-201ENST00000354473 CIAPIN1Q6FI81 312 aa23.65■■□□□ 1.38
VPS72-201ENST00000354473 ATF7IPQ6VMQ6 1270 aa23.65■■□□□ 1.38
VPS72-201ENST00000354473 ANKRD2Q9GZV1 360 aa23.65■■□□□ 1.38
VPS72-201ENST00000354473 TAF1DQ9H5J8 278 aaPredicted RBP23.65■■□□□ 1.38
VPS72-201ENST00000354473 CHRNDQ07001 517 aa23.64■■□□□ 1.38
VPS72-201ENST00000354473 SMC1BQ8NDV3 1235 aa23.64■■□□□ 1.38
VPS72-201ENST00000354473 TNNQ9UQP3 1299 aa23.64■■□□□ 1.38
VPS72-201ENST00000354473 G3V3G9 751 aa23.63■■□□□ 1.37
VPS72-201ENST00000354473 UBTFL1P0CB47 393 aaPredicted RBP23.63■■□□□ 1.37
VPS72-201ENST00000354473 LMOD1P29536 600 aaPredicted RBP23.63■■□□□ 1.37
VPS72-201ENST00000354473 TNIP1Q15025 636 aa23.63■■□□□ 1.37
VPS72-201ENST00000354473 DCAF8Q5TAQ9 597 aa23.63■■□□□ 1.37
VPS72-201ENST00000354473 INTS3Q68E01 1043 aaKnown RBP23.63■■□□□ 1.37
VPS72-201ENST00000354473 LDHAL6AQ6ZMR3 332 aa23.63■■□□□ 1.37
VPS72-201ENST00000354473 SCN9AQ15858 1988 aa23.63■■□□□ 1.37
VPS72-201ENST00000354473 MED23Q9ULK4 1368 aa23.63■■□□□ 1.37
VPS72-201ENST00000354473 EPHX2P34913 555 aa23.62■■□□□ 1.37
VPS72-201ENST00000354473 SCNN1DP51172 638 aa23.62■■□□□ 1.37
VPS72-201ENST00000354473 FSTL1Q12841 308 aa23.62■■□□□ 1.37
VPS72-201ENST00000354473 CLUAP1Q96AJ1 413 aa23.62■■□□□ 1.37
VPS72-201ENST00000354473 LEMD3Q9Y2U8 911 aa23.62■■□□□ 1.37
VPS72-201ENST00000354473 POTEIP0CG38 1075 aa23.61■■□□□ 1.37
VPS72-201ENST00000354473 POTEJP0CG39 1038 aa23.61■■□□□ 1.37
VPS72-201ENST00000354473 ZKSCAN2Q63HK3 967 aa23.61■■□□□ 1.37
VPS72-201ENST00000354473 CNNM1Q9NRU3 951 aa23.61■■□□□ 1.37
VPS72-201ENST00000354473 ZNF804BA4D1E1 1349 aa23.61■■□□□ 1.37
VPS72-201ENST00000354473 KCNJ4P48050 445 aa23.6■■□□□ 1.37
VPS72-201ENST00000354473 GMPSP49915 693 aaPredicted RBP23.6■■□□□ 1.37
VPS72-201ENST00000354473 EAPPQ56P03 285 aaPredicted RBP23.6■■□□□ 1.37
VPS72-201ENST00000354473 HELBQ8NG08 1087 aaPredicted RBP23.6■■□□□ 1.37
VPS72-201ENST00000354473 MEIS3Q99687 375 aa23.6■■□□□ 1.37
VPS72-201ENST00000354473 PSMD14O00487 310 aa23.59■■□□□ 1.37
VPS72-201ENST00000354473 TAF5LO75529 589 aa23.59■■□□□ 1.37
VPS72-201ENST00000354473 HSPA6P17066 643 aa23.59■■□□□ 1.37
VPS72-201ENST00000354473 EPS15P42566 896 aa23.59■■□□□ 1.37
VPS72-201ENST00000354473 KCNQ5Q9NR82 932 aa23.59■■□□□ 1.37
VPS72-201ENST00000354473 GPRC5DQ9NZD1 345 aa23.59■■□□□ 1.37
VPS72-201ENST00000354473 LRRFIP2Q9Y608 721 aaKnown RBP23.59■■□□□ 1.37
VPS72-201ENST00000354473 ADAMTSL1Q8N6G6 1762 aa23.58■■□□□ 1.37
VPS72-201ENST00000354473 PSME4Q14997 1843 aa23.58■■□□□ 1.37
VPS72-201ENST00000354473 KLRK1P26718 216 aa23.58■■□□□ 1.36
VPS72-201ENST00000354473 PNMA8AQ86V59 439 aaPredicted RBP23.58■■□□□ 1.36
VPS72-201ENST00000354473 LDHDQ86WU2 507 aa23.58■■□□□ 1.36
VPS72-201ENST00000354473 PUS3Q9BZE2 481 aaKnown RBP23.58■■□□□ 1.36
VPS72-201ENST00000354473 HDAC5Q9UQL6 1122 aa23.58■■□□□ 1.36
VPS72-201ENST00000354473 SNAP23O00161 211 aa23.57■■□□□ 1.36
VPS72-201ENST00000354473 PLIN1O60240 522 aa23.57■■□□□ 1.36
VPS72-201ENST00000354473 CHADLQ6NUI6 762 aa23.57■■□□□ 1.36
VPS72-201ENST00000354473 TXNRD3Q86VQ6 643 aa23.57■■□□□ 1.36
VPS72-201ENST00000354473 GNAI3P08754 354 aa23.56■■□□□ 1.36
VPS72-201ENST00000354473 KLHDC4Q8TBB5 520 aa23.56■■□□□ 1.36
VPS72-201ENST00000354473 ZBTB12Q9Y330 459 aaPredicted RBP23.56■■□□□ 1.36
VPS72-201ENST00000354473 PODNQ7Z5L7 613 aa23.55■■□□□ 1.36
VPS72-201ENST00000354473 FTSJ3Q8IY81 847 aaKnown RBP23.55■■□□□ 1.36
VPS72-201ENST00000354473 TMEM57Q8N5G2 664 aa23.55■■□□□ 1.36
VPS72-201ENST00000354473 CLEC11AQ9Y240 323 aa23.55■■□□□ 1.36
VPS72-201ENST00000354473 COA1Q9GZY4 146 aa23.54■■□□□ 1.36
VPS72-201ENST00000354473 RIPOR2Q9Y4F9 1068 aa23.54■■□□□ 1.36
VPS72-201ENST00000354473 MROH5Q6ZUA9 1318 aa23.53■■□□□ 1.36
VPS72-201ENST00000354473 IRS2Q9Y4H2 1338 aa23.53■■□□□ 1.36
VPS72-201ENST00000354473 RPS12P25398 132 aaKnown RBP23.53■■□□□ 1.36
VPS72-201ENST00000354473 RFX5P48382 616 aaPredicted RBP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms