RNA–Protein interactions for RNA: ENST00000354371.6

COPS8-201, Transcript of COP9 signalosome subunit 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS8, Length 4,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS8-201ENST00000354371 PSMA5P28066 241 aa13.2□□□□□ -0.3
COPS8-201ENST00000354371 PLEKHO1Q53GL0 409 aaPredicted RBP13.2□□□□□ -0.3
COPS8-201ENST00000354371 KAT2BQ92831 832 aa13.2□□□□□ -0.3
COPS8-201ENST00000354371 NAT10Q9H0A0 1025 aaKnown RBP13.2□□□□□ -0.3
COPS8-201ENST00000354371 BTBD11A6QL63 1104 aa13.2□□□□□ -0.3
COPS8-201ENST00000354371 CORO7P57737 925 aa13.2□□□□□ -0.3
COPS8-201ENST00000354371 TRIM65Q6PJ69 517 aa13.2□□□□□ -0.3
COPS8-201ENST00000354371 NFXL1Q6ZNB6 911 aa13.2□□□□□ -0.3
COPS8-201ENST00000354371 PPP1R13BQ96KQ4 1090 aa13.2□□□□□ -0.3
COPS8-201ENST00000354371 PDRG1Q9NUG6 133 aa13.2□□□□□ -0.3
COPS8-201ENST00000354371 ATP8B1O43520 1251 aa13.19□□□□□ -0.3
COPS8-201ENST00000354371 MAP3K11Q16584 847 aa13.19□□□□□ -0.3
COPS8-201ENST00000354371 TTC31Q49AM3 519 aaPredicted RBP13.19□□□□□ -0.3
COPS8-201ENST00000354371 GRIPAP1Q4V328 841 aa13.19□□□□□ -0.3
COPS8-201ENST00000354371 SSH2Q76I76 1423 aa13.19□□□□□ -0.3
COPS8-201ENST00000354371 LTKP29376 864 aa13.19□□□□□ -0.3
COPS8-201ENST00000354371 STK38Q15208 465 aa13.19□□□□□ -0.3
COPS8-201ENST00000354371 TMED8Q6PL24 325 aaPredicted RBP13.19□□□□□ -0.3
COPS8-201ENST00000354371 MRFAP1L1Q96HT8 127 aa13.19□□□□□ -0.3
COPS8-201ENST00000354371 TCEANC2Q96MN5 208 aa13.19□□□□□ -0.3
COPS8-201ENST00000354371 CD163L1Q9NR16 1453 aa13.19□□□□□ -0.3
COPS8-201ENST00000354371 TULP4Q9NRJ4 1543 aa13.19□□□□□ -0.3
COPS8-201ENST00000354371 PDE1AP54750 535 aa13.19□□□□□ -0.3
COPS8-201ENST00000354371 USP16Q9Y5T5 823 aa13.19□□□□□ -0.3
COPS8-201ENST00000354371 TRDNQ13061 729 aa13.18□□□□□ -0.3
COPS8-201ENST00000354371 BLOC1S2Q6QNY1 142 aa13.18□□□□□ -0.3
COPS8-201ENST00000354371 AACSQ86V21 672 aa13.18□□□□□ -0.3
COPS8-201ENST00000354371 MAP2K7O14733 419 aa13.18□□□□□ -0.3
COPS8-201ENST00000354371 AKAP17AQ02040 695 aaKnown RBP13.18□□□□□ -0.3
COPS8-201ENST00000354371 PRPF40BQ6NWY9 871 aaKnown RBP13.18□□□□□ -0.3
COPS8-201ENST00000354371 UNC5CLQ8IV45 518 aa13.18□□□□□ -0.3
COPS8-201ENST00000354371 MEIS3Q99687 375 aa13.18□□□□□ -0.3
COPS8-201ENST00000354371 CCDC69A6NI79 296 aa13.18□□□□□ -0.3
COPS8-201ENST00000354371 SERPINC1P01008 464 aa13.18□□□□□ -0.3
COPS8-201ENST00000354371 ZNF853P0CG23 659 aa13.18□□□□□ -0.3
COPS8-201ENST00000354371 SLC39A6Q13433 755 aa13.18□□□□□ -0.3
COPS8-201ENST00000354371 EIF4A2Q14240 407 aaKnown RBP13.18□□□□□ -0.3
COPS8-201ENST00000354371 RALYLQ86SE5 291 aaKnown RBP13.18□□□□□ -0.3
COPS8-201ENST00000354371 CHMLP26374 656 aa13.17□□□□□ -0.3
COPS8-201ENST00000354371 SATB1Q01826 763 aa13.17□□□□□ -0.3
COPS8-201ENST00000354371 KCNV1Q6PIU1 500 aa13.17□□□□□ -0.3
COPS8-201ENST00000354371 PNPLA6Q8IY17 1366 aa13.17□□□□□ -0.3
COPS8-201ENST00000354371 RIMS2Q9UQ26 1411 aa13.17□□□□□ -0.3
COPS8-201ENST00000354371 GNAT3A8MTJ3 354 aa13.17□□□□□ -0.3
COPS8-201ENST00000354371 ANKRD65E5RJM6 399 aa13.17□□□□□ -0.3
COPS8-201ENST00000354371 HSPA4P34932 840 aa13.17□□□□□ -0.3
COPS8-201ENST00000354371 SGSM3Q96HU1 749 aa13.17□□□□□ -0.3
COPS8-201ENST00000354371 ORAI2Q96SN7 254 aa13.17□□□□□ -0.3
COPS8-201ENST00000354371 DNAJC25Q9H1X3 360 aa13.17□□□□□ -0.3
COPS8-201ENST00000354371 IPO7O95373 1038 aaKnown RBP13.17□□□□□ -0.3
COPS8-201ENST00000354371 TATP17735 454 aaPredicted RBP13.17□□□□□ -0.3
COPS8-201ENST00000354371 CCT4P50991 539 aaKnown RBP13.17□□□□□ -0.3
COPS8-201ENST00000354371 C11orf57Q6ZUT1 292 aaPredicted RBP13.17□□□□□ -0.3
COPS8-201ENST00000354371 ABCA9Q8IUA7 1624 aa13.17□□□□□ -0.3
COPS8-201ENST00000354371 NPATQ14207 1427 aa13.17□□□□□ -0.3
COPS8-201ENST00000354371 DHX40Q8IX18 779 aaKnown RBP13.17□□□□□ -0.3
COPS8-201ENST00000354371 GUCY1B3Q02153 619 aa13.16□□□□□ -0.3
COPS8-201ENST00000354371 FAM212AQ96EL1 285 aa13.16□□□□□ -0.3
COPS8-201ENST00000354371 CEP89Q96ST8 783 aa13.16□□□□□ -0.3
COPS8-201ENST00000354371 BOLA2Q9H3K6 86 aa13.16□□□□□ -0.3
COPS8-201ENST00000354371 COL9A3Q14050 684 aaPredicted RBP13.16□□□□□ -0.3
COPS8-201ENST00000354371 PARP3Q9Y6F1 533 aa13.16□□□□□ -0.3
COPS8-201ENST00000354371 EFCAB6Q5THR3 1501 aa13.16□□□□□ -0.3
COPS8-201ENST00000354371 CABP4P57796 275 aa13.16□□□□□ -0.3
COPS8-201ENST00000354371 ARMCX5Q6P1M9 558 aa13.16□□□□□ -0.3
COPS8-201ENST00000354371 CCDC8Q9H0W5 538 aaPredicted RBP13.16□□□□□ -0.3
COPS8-201ENST00000354371 ABCC3O15438 1527 aa13.15□□□□□ -0.3
COPS8-201ENST00000354371 POGZQ7Z3K3 1410 aa13.15□□□□□ -0.3
COPS8-201ENST00000354371 AK2P54819 239 aa13.15□□□□□ -0.3
COPS8-201ENST00000354371 TAF7Q15545 349 aaPredicted RBP13.15□□□□□ -0.3
COPS8-201ENST00000354371 MCTP2Q6DN12 878 aa13.15□□□□□ -0.3
COPS8-201ENST00000354371 DACT1Q9NYF0 836 aa13.15□□□□□ -0.3
COPS8-201ENST00000354371 NR1I2O75469 434 aa13.15□□□□□ -0.3
COPS8-201ENST00000354371 KRT28Q7Z3Y7 464 aa13.15□□□□□ -0.3
COPS8-201ENST00000354371 RAD21O60216 631 aa13.15□□□□□ -0.3
COPS8-201ENST00000354371 RRP12Q5JTH9 1297 aaKnown RBP13.15□□□□□ -0.3
COPS8-201ENST00000354371 TMCO3Q6UWJ1 677 aa13.15□□□□□ -0.3
COPS8-201ENST00000354371 OLFM4Q6UX06 510 aa13.15□□□□□ -0.3
COPS8-201ENST00000354371 LRRC31Q6UY01 552 aa13.15□□□□□ -0.3
COPS8-201ENST00000354371 RSRC2Q7L4I2 434 aaKnown RBP13.15□□□□□ -0.3
COPS8-201ENST00000354371 RASEFQ8IZ41 740 aa13.15□□□□□ -0.3
COPS8-201ENST00000354371 RNF217Q8TC41 542 aa13.15□□□□□ -0.3
COPS8-201ENST00000354371 FAM173BQ6P4H8 233 aa13.14□□□□□ -0.31
COPS8-201ENST00000354371 UBXN4Q92575 508 aa13.14□□□□□ -0.31
COPS8-201ENST00000354371 AKAP2Q9Y2D5 859 aa13.14□□□□□ -0.31
COPS8-201ENST00000354371 ATP7AQ04656 1500 aa13.14□□□□□ -0.31
COPS8-201ENST00000354371 ZNF165P49910 485 aa13.14□□□□□ -0.31
COPS8-201ENST00000354371 CCDC158Q5M9N0 1113 aa13.14□□□□□ -0.31
COPS8-201ENST00000354371 PGBD1Q96JS3 809 aa13.14□□□□□ -0.31
COPS8-201ENST00000354371 OSBPL5Q9H0X9 879 aaPredicted RBP13.14□□□□□ -0.31
COPS8-201ENST00000354371 CLSTN2Q9H4D0 955 aa13.14□□□□□ -0.31
COPS8-201ENST00000354371 TET3O43151 1660 aa13.14□□□□□ -0.31
COPS8-201ENST00000354371 ARHGEF28Q8N1W1 1705 aaKnown RBP13.14□□□□□ -0.31
COPS8-201ENST00000354371 KIF1CO43896 1103 aaKnown RBP13.14□□□□□ -0.31
COPS8-201ENST00000354371 NEMFO60524 1076 aa13.14□□□□□ -0.31
COPS8-201ENST00000354371 SNW1Q13573 536 aaKnown RBP13.13□□□□□ -0.31
COPS8-201ENST00000354371 N4BP1O75113 896 aaKnown RBP13.13□□□□□ -0.31
COPS8-201ENST00000354371 RAB11FIP3O75154 756 aa13.13□□□□□ -0.31
COPS8-201ENST00000354371 LMAN1P49257 510 aa13.13□□□□□ -0.31
COPS8-201ENST00000354371 C11orf91Q3C1V1 193 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms