RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 GPR25O00155 361 aa20.87■□□□□ 0.93
DDX55-202ENST00000354291 VIL1P09327 827 aaKnown RBP20.87■□□□□ 0.93
DDX55-202ENST00000354291 PPP2R1AP30153 589 aa20.87■□□□□ 0.93
DDX55-202ENST00000354291 TCIRG1Q13488 830 aa20.87■□□□□ 0.93
DDX55-202ENST00000354291 NECTIN2Q92692 538 aa20.87■□□□□ 0.93
DDX55-202ENST00000354291 FKBP1BP68106 108 aa20.86■□□□□ 0.93
DDX55-202ENST00000354291 MKRN3Q13064 507 aaKnown RBP20.86■□□□□ 0.93
DDX55-202ENST00000354291 XAGE3Q8WTP9 111 aa20.86■□□□□ 0.93
DDX55-202ENST00000354291 ZC3H12CQ9C0D7 883 aaKnown RBP20.86■□□□□ 0.93
DDX55-202ENST00000354291 SCAF8Q9UPN6 1271 aaKnown RBP20.86■□□□□ 0.93
DDX55-202ENST00000354291 TAF1P21675 1872 aa20.86■□□□□ 0.93
DDX55-202ENST00000354291 DUOX1Q9NRD9 1551 aa20.85■□□□□ 0.93
DDX55-202ENST00000354291 TSPYL4Q9UJ04 414 aa20.85■□□□□ 0.93
DDX55-202ENST00000354291 TTLL12Q14166 644 aaPredicted RBP20.84■□□□□ 0.93
DDX55-202ENST00000354291 PRAMEF18Q5VWM3 479 aa20.84■□□□□ 0.93
DDX55-202ENST00000354291 TBC1D16Q8TBP0 767 aa20.84■□□□□ 0.93
DDX55-202ENST00000354291 FKTNO75072 461 aa20.83■□□□□ 0.93
DDX55-202ENST00000354291 TM4SF4P48230 202 aa20.83■□□□□ 0.93
DDX55-202ENST00000354291 NFE2L2Q16236 605 aa20.82■□□□□ 0.92
DDX55-202ENST00000354291 FAM89AQ96GI7 184 aa20.82■□□□□ 0.92
DDX55-202ENST00000354291 ZNF280AP59817 542 aaPredicted RBP20.81■□□□□ 0.92
DDX55-202ENST00000354291 RTL5Q5HYW3 569 aaPredicted RBP20.81■□□□□ 0.92
DDX55-202ENST00000354291 R3HDMLQ9H3Y0 253 aa20.81■□□□□ 0.92
DDX55-202ENST00000354291 LAMB2P55268 1798 aa20.81■□□□□ 0.92
DDX55-202ENST00000354291 ANKRD36CQ5JPF3 1778 aa20.81■□□□□ 0.92
DDX55-202ENST00000354291 KDM3BQ7LBC6 1761 aa20.81■□□□□ 0.92
DDX55-202ENST00000354291 RPS8P62241 208 aaKnown RBP20.8■□□□□ 0.92
DDX55-202ENST00000354291 SF3B3Q15393 1217 aaKnown RBP20.8■□□□□ 0.92
DDX55-202ENST00000354291 RSBN1LQ6PCB5 846 aaPredicted RBP20.8■□□□□ 0.92
DDX55-202ENST00000354291 AGBL3Q8NEM8 1001 aa20.8■□□□□ 0.92
DDX55-202ENST00000354291 MYOZ2Q9NPC6 264 aa20.8■□□□□ 0.92
DDX55-202ENST00000354291 USP17L8P0C7I0 530 aa20.79■□□□□ 0.92
DDX55-202ENST00000354291 NOM1Q5C9Z4 860 aaKnown RBP20.79■□□□□ 0.92
DDX55-202ENST00000354291 ANKIB1Q9P2G1 1089 aa20.79■□□□□ 0.92
DDX55-202ENST00000354291 POTEFA5A3E0 1075 aa20.78■□□□□ 0.92
DDX55-202ENST00000354291 UFL1O94874 794 aa20.78■□□□□ 0.92
DDX55-202ENST00000354291 SREBF2Q12772 1141 aa20.78■□□□□ 0.92
DDX55-202ENST00000354291 ATP5J2-PTCD1G3V325 749 aa20.77■□□□□ 0.92
DDX55-202ENST00000354291 PLEKHF1Q96S99 279 aa20.77■□□□□ 0.92
DDX55-202ENST00000354291 PITPNM2Q9BZ72 1349 aa20.77■□□□□ 0.91
DDX55-202ENST00000354291 CENPFP49454 3210 aa20.76■□□□□ 0.91
DDX55-202ENST00000354291 GGA1Q9UJY5 639 aa20.76■□□□□ 0.91
DDX55-202ENST00000354291 TRIM17Q9Y577 477 aa20.76■□□□□ 0.91
DDX55-202ENST00000354291 PAPPA2Q9BXP8 1791 aa20.75■□□□□ 0.91
DDX55-202ENST00000354291 NF2P35240 595 aa20.75■□□□□ 0.91
DDX55-202ENST00000354291 FXR1P51114 621 aaKnown RBP eCLIP20.75■□□□□ 0.91
DDX55-202ENST00000354291 PRKG1Q13976 671 aa20.75■□□□□ 0.91
DDX55-202ENST00000354291 NBPF9Q3BBW0 867 aa20.75■□□□□ 0.91
DDX55-202ENST00000354291 INTS3Q68E01 1043 aaKnown RBP20.75■□□□□ 0.91
DDX55-202ENST00000354291 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.75■□□□□ 0.91
DDX55-202ENST00000354291 HTTP42858 3142 aa20.74■□□□□ 0.91
DDX55-202ENST00000354291 PTPN12Q05209 780 aaKnown RBP20.74■□□□□ 0.91
DDX55-202ENST00000354291 GMLQ99445 158 aa20.74■□□□□ 0.91
DDX55-202ENST00000354291 PODXL2Q9NZ53 605 aa20.74■□□□□ 0.91
DDX55-202ENST00000354291 MAPK8IP3Q9UPT6 1336 aa20.74■□□□□ 0.91
DDX55-202ENST00000354291 LRRC37AA6NMS7 1700 aa20.73■□□□□ 0.91
DDX55-202ENST00000354291 IRS4O14654 1257 aaPredicted RBP20.73■□□□□ 0.91
DDX55-202ENST00000354291 SEC31BQ9NQW1 1179 aa20.73■□□□□ 0.91
DDX55-202ENST00000354291 SCN9AQ15858 1988 aa20.73■□□□□ 0.91
DDX55-202ENST00000354291 DLG5Q8TDM6 1919 aa20.72■□□□□ 0.91
DDX55-202ENST00000354291 KIAA0100Q14667 2235 aaKnown RBP20.72■□□□□ 0.91
DDX55-202ENST00000354291 USP17L3A6NCW0 530 aa20.72■□□□□ 0.91
DDX55-202ENST00000354291 USP17L4A6NCW7 530 aa20.72■□□□□ 0.91
DDX55-202ENST00000354291 ANKRD13DQ6ZTN6 518 aa20.72■□□□□ 0.91
DDX55-202ENST00000354291 USP17L1Q7RTZ2 530 aa20.72■□□□□ 0.91
DDX55-202ENST00000354291 PLBD2Q8NHP8 589 aa20.72■□□□□ 0.91
DDX55-202ENST00000354291 ISCA1Q9BUE6 129 aa20.72■□□□□ 0.91
DDX55-202ENST00000354291 CFHR5Q9BXR6 569 aa20.72■□□□□ 0.91
DDX55-202ENST00000354291 OTOP1Q7RTM1 612 aa20.71■□□□□ 0.91
DDX55-202ENST00000354291 ARMC9Q7Z3E5 817 aa20.71■□□□□ 0.91
DDX55-202ENST00000354291 PNNQ9H307 717 aaKnown RBP20.71■□□□□ 0.91
DDX55-202ENST00000354291 ALDH1A1P00352 501 aa20.7■□□□□ 0.9
DDX55-202ENST00000354291 EN2P19622 333 aaPredicted RBP20.7■□□□□ 0.9
DDX55-202ENST00000354291 RIPK4P57078 832 aa20.7■□□□□ 0.9
DDX55-202ENST00000354291 CHPF2Q9P2E5 772 aa20.7■□□□□ 0.9
DDX55-202ENST00000354291 COL4A1P02462 1669 aa20.7■□□□□ 0.9
DDX55-202ENST00000354291 KRT24Q2M2I5 525 aa20.69■□□□□ 0.9
DDX55-202ENST00000354291 SPRYD7Q5W111 196 aa20.69■□□□□ 0.9
DDX55-202ENST00000354291 MXD3Q9BW11 206 aa20.69■□□□□ 0.9
DDX55-202ENST00000354291 PODNQ7Z5L7 613 aa20.68■□□□□ 0.9
DDX55-202ENST00000354291 OGFOD1Q8N543 542 aa20.68■□□□□ 0.9
DDX55-202ENST00000354291 FBXW7Q969H0 707 aa20.68■□□□□ 0.9
DDX55-202ENST00000354291 BABAM1Q9NWV8 329 aa20.68■□□□□ 0.9
DDX55-202ENST00000354291 COLQQ9Y215 455 aaPredicted RBP20.68■□□□□ 0.9
DDX55-202ENST00000354291 WNT10BO00744 389 aa20.67■□□□□ 0.9
DDX55-202ENST00000354291 SLC10A4Q96EP9 437 aa20.67■□□□□ 0.9
DDX55-202ENST00000354291 CCDC85AQ96PX6 553 aaPredicted RBP20.67■□□□□ 0.9
DDX55-202ENST00000354291 ANGEL1Q9UNK9 670 aaKnown RBP20.67■□□□□ 0.9
DDX55-202ENST00000354291 BRCA2P51587 3418 aa20.66■□□□□ 0.9
DDX55-202ENST00000354291 IFNL1Q8IU54 200 aa20.66■□□□□ 0.9
DDX55-202ENST00000354291 FZD1Q9UP38 647 aa20.66■□□□□ 0.9
DDX55-202ENST00000354291 PTPN22Q9Y2R2 807 aa20.66■□□□□ 0.9
DDX55-202ENST00000354291 DDX60Q8IY21 1712 aaKnown RBP20.66■□□□□ 0.9
DDX55-202ENST00000354291 ZNF609O15014 1411 aa20.65■□□□□ 0.9
DDX55-202ENST00000354291 MANSC4A6NHS7 340 aaPredicted RBP20.65■□□□□ 0.9
DDX55-202ENST00000354291 SASH1O94885 1247 aa20.65■□□□□ 0.9
DDX55-202ENST00000354291 INHBEP58166 350 aa20.65■□□□□ 0.9
DDX55-202ENST00000354291 LDLRAD1Q5T700 205 aa20.65■□□□□ 0.9
DDX55-202ENST00000354291 LAS1LQ9Y4W2 734 aaKnown RBP20.65■□□□□ 0.9
DDX55-202ENST00000354291 XDHP47989 1333 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms