RNA–Protein interactions for RNA: ENST00000353319.8

PTPN2-203, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-203ENST00000353319 TSGA10IPQ3SY00 556 aa12.68□□□□□ -0.38
PTPN2-203ENST00000353319 EDC3Q96F86 508 aaKnown RBP12.68□□□□□ -0.38
PTPN2-203ENST00000353319 XAGE2Q96GT9 111 aa12.68□□□□□ -0.38
PTPN2-203ENST00000353319 PAG1Q9NWQ8 432 aa12.68□□□□□ -0.38
PTPN2-203ENST00000353319 PDE8BO95263 885 aa12.67□□□□□ -0.38
PTPN2-203ENST00000353319 IFIT1P09914 478 aaKnown RBP12.67□□□□□ -0.38
PTPN2-203ENST00000353319 RAB3GAP1Q15042 981 aa12.67□□□□□ -0.38
PTPN2-203ENST00000353319 MCMDC2Q4G0Z9 681 aa12.67□□□□□ -0.38
PTPN2-203ENST00000353319 METTL24Q5JXM2 366 aa12.67□□□□□ -0.38
PTPN2-203ENST00000353319 USPL1Q5W0Q7 1092 aa12.67□□□□□ -0.38
PTPN2-203ENST00000353319 SEPT12Q8IYM1 358 aa12.67□□□□□ -0.38
PTPN2-203ENST00000353319 RASEFQ8IZ41 740 aa12.67□□□□□ -0.38
PTPN2-203ENST00000353319 INTS4Q96HW7 963 aaKnown RBP12.67□□□□□ -0.38
PTPN2-203ENST00000353319 CCDC85AQ96PX6 553 aaPredicted RBP12.67□□□□□ -0.38
PTPN2-203ENST00000353319 HELLSQ9NRZ9 838 aa12.67□□□□□ -0.38
PTPN2-203ENST00000353319 NARFQ9UHQ1 456 aa12.67□□□□□ -0.38
PTPN2-203ENST00000353319 RIC1Q4ADV7 1423 aa12.67□□□□□ -0.38
PTPN2-203ENST00000353319 MROH5Q6ZUA9 1318 aa12.67□□□□□ -0.38
PTPN2-203ENST00000353319 LRP5O75197 1615 aa12.67□□□□□ -0.38
PTPN2-203ENST00000353319 TAF5LO75529 589 aa12.67□□□□□ -0.38
PTPN2-203ENST00000353319 ATP2B3Q16720 1220 aa12.67□□□□□ -0.38
PTPN2-203ENST00000353319 CCDC152Q4G0S7 254 aa12.67□□□□□ -0.38
PTPN2-203ENST00000353319 SLC10A5Q5PT55 438 aa12.67□□□□□ -0.38
PTPN2-203ENST00000353319 TMX3Q96JJ7 454 aa12.67□□□□□ -0.38
PTPN2-203ENST00000353319 TTC14Q96N46 770 aa12.67□□□□□ -0.38
PTPN2-203ENST00000353319 DNAJC2Q99543 621 aaKnown RBP12.67□□□□□ -0.38
PTPN2-203ENST00000353319 CNNM1Q9NRU3 951 aa12.67□□□□□ -0.38
PTPN2-203ENST00000353319 RBM8AQ9Y5S9 174 aaKnown RBP12.67□□□□□ -0.38
PTPN2-203ENST00000353319 SBF2Q86WG5 1849 aa12.66□□□□□ -0.38
PTPN2-203ENST00000353319 LY75O60449 1722 aa12.66□□□□□ -0.38
PTPN2-203ENST00000353319 LAMB2P55268 1798 aa12.66□□□□□ -0.38
PTPN2-203ENST00000353319 HCLS1P14317 486 aaPredicted RBP12.66□□□□□ -0.38
PTPN2-203ENST00000353319 ZKSCAN1P17029 563 aaPredicted RBP12.66□□□□□ -0.38
PTPN2-203ENST00000353319 SSFA2P28290 1259 aa12.66□□□□□ -0.38
PTPN2-203ENST00000353319 NUCB2P80303 420 aa12.66□□□□□ -0.38
PTPN2-203ENST00000353319 LRRFIP1Q32MZ4 808 aaKnown RBP12.66□□□□□ -0.38
PTPN2-203ENST00000353319 CREB3L3Q68CJ9 461 aa12.66□□□□□ -0.38
PTPN2-203ENST00000353319 CLEC17AQ6ZS10 378 aa12.66□□□□□ -0.38
PTPN2-203ENST00000353319 DDX46Q7L014 1031 aaKnown RBP12.66□□□□□ -0.38
PTPN2-203ENST00000353319 BCL11BQ9C0K0 894 aaPredicted RBP12.66□□□□□ -0.38
PTPN2-203ENST00000353319 QTRT2Q9H974 415 aaKnown RBP12.66□□□□□ -0.38
PTPN2-203ENST00000353319 ZSWIM6Q9HCJ5 1215 aa12.66□□□□□ -0.38
PTPN2-203ENST00000353319 HMG20BQ9P0W2 317 aa12.66□□□□□ -0.38
PTPN2-203ENST00000353319 CCNL1Q9UK58 526 aaPredicted RBP12.66□□□□□ -0.38
PTPN2-203ENST00000353319 DDX60Q8IY21 1712 aaKnown RBP12.66□□□□□ -0.38
PTPN2-203ENST00000353319 GOLIM4O00461 696 aa12.65□□□□□ -0.38
PTPN2-203ENST00000353319 ZFYP08048 801 aaPredicted RBP12.65□□□□□ -0.38
PTPN2-203ENST00000353319 FGFR2P21802 821 aa12.65□□□□□ -0.38
PTPN2-203ENST00000353319 ADORA1P30542 326 aa12.65□□□□□ -0.38
PTPN2-203ENST00000353319 MCM4P33991 863 aa12.65□□□□□ -0.38
PTPN2-203ENST00000353319 SF3B3Q15393 1217 aaKnown RBP12.65□□□□□ -0.38
PTPN2-203ENST00000353319 TTC39AQ5SRH9 613 aa12.65□□□□□ -0.38
PTPN2-203ENST00000353319 ZMYM1Q5SVZ6 1142 aa12.65□□□□□ -0.38
PTPN2-203ENST00000353319 GORABQ5T7V8 394 aa12.65□□□□□ -0.38
PTPN2-203ENST00000353319 RNF20Q5VTR2 975 aa12.65□□□□□ -0.38
PTPN2-203ENST00000353319 PRPF40BQ6NWY9 871 aaKnown RBP12.65□□□□□ -0.38
PTPN2-203ENST00000353319 BCL2L12Q9HB09 334 aa12.65□□□□□ -0.38
PTPN2-203ENST00000353319 SLC27A2O14975 620 aa12.64□□□□□ -0.39
PTPN2-203ENST00000353319 RNF113AO15541 343 aaKnown RBP12.64□□□□□ -0.39
PTPN2-203ENST00000353319 PSMA5P28066 241 aa12.64□□□□□ -0.39
PTPN2-203ENST00000353319 VPS53Q5VIR6 699 aa12.64□□□□□ -0.39
PTPN2-203ENST00000353319 ZNF589Q86UQ0 364 aaPredicted RBP12.64□□□□□ -0.39
PTPN2-203ENST00000353319 LPIN2Q92539 896 aa12.64□□□□□ -0.39
PTPN2-203ENST00000353319 UPF3BQ9BZI7 483 aaKnown RBP12.64□□□□□ -0.39
PTPN2-203ENST00000353319 ALDH8A1Q9H2A2 487 aaPredicted RBP12.64□□□□□ -0.39
PTPN2-203ENST00000353319 RTCBQ9Y3I0 505 aaKnown RBP12.64□□□□□ -0.39
PTPN2-203ENST00000353319 NDUFB9Q9Y6M9 179 aa12.64□□□□□ -0.39
PTPN2-203ENST00000353319 SCN7AQ01118 1682 aa12.64□□□□□ -0.39
PTPN2-203ENST00000353319 CYP2E1P05181 493 aaPredicted RBP12.63□□□□□ -0.39
PTPN2-203ENST00000353319 KCNJ4P48050 445 aa12.63□□□□□ -0.39
PTPN2-203ENST00000353319 KCNQ4P56696 695 aa12.63□□□□□ -0.39
PTPN2-203ENST00000353319 PUM3Q15397 648 aaKnown RBP12.63□□□□□ -0.39
PTPN2-203ENST00000353319 TNPO1Q92973 898 aaKnown RBP12.63□□□□□ -0.39
PTPN2-203ENST00000353319 NYXQ9GZU5 481 aa12.63□□□□□ -0.39
PTPN2-203ENST00000353319 TAF1LQ8IZX4 1826 aa12.63□□□□□ -0.39
PTPN2-203ENST00000353319 UQCRFS1P1P0C7P4 283 aa12.62□□□□□ -0.39
PTPN2-203ENST00000353319 ARID4AP29374 1257 aaPredicted RBP12.62□□□□□ -0.39
PTPN2-203ENST00000353319 IGHMBP2P38935 993 aaKnown RBP12.62□□□□□ -0.39
PTPN2-203ENST00000353319 KRT32Q14532 448 aa12.62□□□□□ -0.39
PTPN2-203ENST00000353319 FAM182BQ5T319 152 aa12.62□□□□□ -0.39
PTPN2-203ENST00000353319 RUFY3Q7L099 469 aa12.62□□□□□ -0.39
PTPN2-203ENST00000353319 MPHOSPH8Q99549 860 aa12.62□□□□□ -0.39
PTPN2-203ENST00000353319 DSCC1Q9BVC3 393 aa12.62□□□□□ -0.39
PTPN2-203ENST00000353319 FOXD4L1Q9NU39 408 aa12.62□□□□□ -0.39
PTPN2-203ENST00000353319 LIMCH1Q9UPQ0 1083 aa12.62□□□□□ -0.39
PTPN2-203ENST00000353319 CYP46A1Q9Y6A2 500 aa12.62□□□□□ -0.39
PTPN2-203ENST00000353319 RPAP1Q9BWH6 1393 aaPredicted RBP12.62□□□□□ -0.39
PTPN2-203ENST00000353319 FAM177BA6PVY3 158 aa12.62□□□□□ -0.39
PTPN2-203ENST00000353319 GNPATO15228 680 aa12.62□□□□□ -0.39
PTPN2-203ENST00000353319 ZPR1O75312 459 aa12.62□□□□□ -0.39
PTPN2-203ENST00000353319 CASTP20810 708 aaKnown RBP12.62□□□□□ -0.39
PTPN2-203ENST00000353319 HMGB2P26583 209 aaKnown RBP12.62□□□□□ -0.39
PTPN2-203ENST00000353319 FKBP4Q02790 459 aaKnown RBP eCLIP12.62□□□□□ -0.39
PTPN2-203ENST00000353319 TTF1Q15361 905 aaPredicted RBP12.62□□□□□ -0.39
PTPN2-203ENST00000353319 ADCK5Q3MIX3 580 aa12.62□□□□□ -0.39
PTPN2-203ENST00000353319 TBC1D9BQ66K14 1250 aa12.62□□□□□ -0.39
PTPN2-203ENST00000353319 FAM196AQ6ZSG2 479 aa12.62□□□□□ -0.39
PTPN2-203ENST00000353319 ZSCAN31Q96LW9 406 aaPredicted RBP12.62□□□□□ -0.39
PTPN2-203ENST00000353319 JAKMIP1Q96N16 626 aaKnown RBP12.62□□□□□ -0.39
PTPN2-203ENST00000353319 GBP4Q96PP9 640 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 232 ms