RNA–Protein interactions for RNA: ENST00000351959.9

TNFRSF25-203, Transcript of TNF receptor superfamily member 25, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF25, Length 1,441 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-203ENST00000351959 SMC5Q8IY18 1101 aa24.83■■□□□ 1.57
TNFRSF25-203ENST00000351959 TMX4Q9H1E5 349 aaPredicted RBP24.83■■□□□ 1.57
TNFRSF25-203ENST00000351959 ATP6V0A2Q9Y487 856 aa24.83■■□□□ 1.57
TNFRSF25-203ENST00000351959 MROH5Q6ZUA9 1318 aa24.82■■□□□ 1.56
TNFRSF25-203ENST00000351959 DALRD3Q5D0E6 543 aaKnown RBP24.82■■□□□ 1.56
TNFRSF25-203ENST00000351959 B4GALNT3Q6L9W6 998 aa24.82■■□□□ 1.56
TNFRSF25-203ENST00000351959 COL4A1P02462 1669 aa24.81■■□□□ 1.56
TNFRSF25-203ENST00000351959 CEP126Q9P2H0 1117 aa24.81■■□□□ 1.56
TNFRSF25-203ENST00000351959 KIAA1551Q9HCM1 1747 aa24.81■■□□□ 1.56
TNFRSF25-203ENST00000351959 LRP5O75197 1615 aa24.8■■□□□ 1.56
TNFRSF25-203ENST00000351959 SASH1O94885 1247 aa24.8■■□□□ 1.56
TNFRSF25-203ENST00000351959 CHRNDQ07001 517 aa24.8■■□□□ 1.56
TNFRSF25-203ENST00000351959 METTL24Q5JXM2 366 aa24.8■■□□□ 1.56
TNFRSF25-203ENST00000351959 CC2D2BQ6DHV5 1058 aa24.8■■□□□ 1.56
TNFRSF25-203ENST00000351959 C7orf43Q8WVR3 580 aa24.8■■□□□ 1.56
TNFRSF25-203ENST00000351959 KIF1BPQ96EK5 621 aa24.8■■□□□ 1.56
TNFRSF25-203ENST00000351959 ANKRD2Q9GZV1 360 aa24.8■■□□□ 1.56
TNFRSF25-203ENST00000351959 TAF1P21675 1872 aa24.8■■□□□ 1.56
TNFRSF25-203ENST00000351959 CENPQQ7L2Z9 268 aaPredicted RBP24.79■■□□□ 1.56
TNFRSF25-203ENST00000351959 RHPN1Q8TCX5 695 aa24.79■■□□□ 1.56
TNFRSF25-203ENST00000351959 DLEC1Q9Y238 1755 aa24.78■■□□□ 1.56
TNFRSF25-203ENST00000351959 KDM2BQ8NHM5 1336 aa24.78■■□□□ 1.56
TNFRSF25-203ENST00000351959 APBB1O00213 710 aa24.78■■□□□ 1.56
TNFRSF25-203ENST00000351959 PDE8BO95263 885 aa24.78■■□□□ 1.56
TNFRSF25-203ENST00000351959 TFCP2Q12800 502 aa24.78■■□□□ 1.56
TNFRSF25-203ENST00000351959 LRRCC1Q9C099 1032 aa24.78■■□□□ 1.56
TNFRSF25-203ENST00000351959 C21orf2O43822 256 aa24.77■■□□□ 1.56
TNFRSF25-203ENST00000351959 GRIPAP1Q4V328 841 aa24.77■■□□□ 1.56
TNFRSF25-203ENST00000351959 HELBQ8NG08 1087 aaPredicted RBP24.77■■□□□ 1.56
TNFRSF25-203ENST00000351959 BCS1LQ9Y276 419 aa24.77■■□□□ 1.56
TNFRSF25-203ENST00000351959 SOGA3Q5TF21 947 aa24.76■■□□□ 1.55
TNFRSF25-203ENST00000351959 ANKRD45Q5TZF3 282 aa24.76■■□□□ 1.55
TNFRSF25-203ENST00000351959 VGLL2Q8N8G2 317 aa24.76■■□□□ 1.55
TNFRSF25-203ENST00000351959 PODXL2Q9NZ53 605 aa24.76■■□□□ 1.55
TNFRSF25-203ENST00000351959 ANKIB1Q9P2G1 1089 aa24.76■■□□□ 1.55
TNFRSF25-203ENST00000351959 ZNF219Q9P2Y4 722 aaPredicted RBP24.76■■□□□ 1.55
TNFRSF25-203ENST00000351959 ZBTB47Q9UFB7 747 aaPredicted RBP24.76■■□□□ 1.55
TNFRSF25-203ENST00000351959 NSFL1CQ9UNZ2 370 aaKnown RBP24.76■■□□□ 1.55
TNFRSF25-203ENST00000351959 XDHP47989 1333 aa24.75■■□□□ 1.55
TNFRSF25-203ENST00000351959 TAF5LO75529 589 aa24.75■■□□□ 1.55
TNFRSF25-203ENST00000351959 GPR108Q9NPR9 543 aa24.75■■□□□ 1.55
TNFRSF25-203ENST00000351959 WWC3Q9ULE0 1092 aa24.75■■□□□ 1.55
TNFRSF25-203ENST00000351959 AKAP2Q9Y2D5 859 aa24.75■■□□□ 1.55
TNFRSF25-203ENST00000351959 SLX4Q8IY92 1834 aa24.75■■□□□ 1.55
TNFRSF25-203ENST00000351959 GPSM2P81274 684 aa24.74■■□□□ 1.55
TNFRSF25-203ENST00000351959 MPNDQ8N594 471 aa24.74■■□□□ 1.55
TNFRSF25-203ENST00000351959 LEMD3Q9Y2U8 911 aa24.74■■□□□ 1.55
TNFRSF25-203ENST00000351959 CCDC93Q567U6 631 aa24.73■■□□□ 1.55
TNFRSF25-203ENST00000351959 OLFM4Q6UX06 510 aa24.73■■□□□ 1.55
TNFRSF25-203ENST00000351959 SLC51AQ86UW1 340 aa24.73■■□□□ 1.55
TNFRSF25-203ENST00000351959 CLASRPQ8N2M8 674 aaKnown RBP24.73■■□□□ 1.55
TNFRSF25-203ENST00000351959 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.73■■□□□ 1.55
TNFRSF25-203ENST00000351959 ATP2B4P23634 1241 aa24.72■■□□□ 1.55
TNFRSF25-203ENST00000351959 NUCB1Q02818 461 aa24.72■■□□□ 1.55
TNFRSF25-203ENST00000351959 UBE4AQ14139 1066 aa24.72■■□□□ 1.55
TNFRSF25-203ENST00000351959 PUM3Q15397 648 aaKnown RBP24.72■■□□□ 1.55
TNFRSF25-203ENST00000351959 RTKN2Q8IZC4 609 aa24.72■■□□□ 1.55
TNFRSF25-203ENST00000351959 IL1RAPL2Q9NP60 686 aa24.72■■□□□ 1.55
TNFRSF25-203ENST00000351959 DPP8Q6V1X1 898 aaPredicted RBP24.71■■□□□ 1.55
TNFRSF25-203ENST00000351959 SMARCA5O60264 1052 aaPredicted RBP24.7■■□□□ 1.55
TNFRSF25-203ENST00000351959 KCNJ4P48050 445 aa24.7■■□□□ 1.55
TNFRSF25-203ENST00000351959 ATP2B3Q16720 1220 aa24.7■■□□□ 1.55
TNFRSF25-203ENST00000351959 TNNI3KQ59H18 835 aa24.7■■□□□ 1.55
TNFRSF25-203ENST00000351959 LPIN2Q92539 896 aa24.7■■□□□ 1.55
TNFRSF25-203ENST00000351959 GGA1Q9UJY5 639 aa24.7■■□□□ 1.55
TNFRSF25-203ENST00000351959 FPGT-TNNI3KV9GXZ4 949 aa24.7■■□□□ 1.55
TNFRSF25-203ENST00000351959 SPEF2Q9C093 1822 aa24.7■■□□□ 1.54
TNFRSF25-203ENST00000351959 BRCA1P38398 1863 aaKnown RBP24.7■■□□□ 1.54
TNFRSF25-203ENST00000351959 FGFR2P21802 821 aa24.69■■□□□ 1.54
TNFRSF25-203ENST00000351959 CHD1LQ86WJ1 897 aa24.69■■□□□ 1.54
TNFRSF25-203ENST00000351959 TBC1D16Q8TBP0 767 aa24.69■■□□□ 1.54
TNFRSF25-203ENST00000351959 ZNF804BA4D1E1 1349 aa24.69■■□□□ 1.54
TNFRSF25-203ENST00000351959 A0A1B0GUL7 405 aa24.69■■□□□ 1.54
TNFRSF25-203ENST00000351959 TIMM10P62072 90 aa24.69■■□□□ 1.54
TNFRSF25-203ENST00000351959 EAF2Q96CJ1 260 aaPredicted RBP24.69■■□□□ 1.54
TNFRSF25-203ENST00000351959 POLLQ9UGP5 575 aa24.69■■□□□ 1.54
TNFRSF25-203ENST00000351959 LRRC37AA6NMS7 1700 aa24.68■■□□□ 1.54
TNFRSF25-203ENST00000351959 SNAP23O00161 211 aa24.68■■□□□ 1.54
TNFRSF25-203ENST00000351959 UFL1O94874 794 aa24.68■■□□□ 1.54
TNFRSF25-203ENST00000351959 IFIT1P09914 478 aaKnown RBP24.68■■□□□ 1.54
TNFRSF25-203ENST00000351959 AACSQ86V21 672 aa24.68■■□□□ 1.54
TNFRSF25-203ENST00000351959 NEUROD6Q96NK8 337 aa24.68■■□□□ 1.54
TNFRSF25-203ENST00000351959 RTFDC1Q9BY42 306 aaPredicted RBP24.68■■□□□ 1.54
TNFRSF25-203ENST00000351959 C6orf229H3BNL8 230 aa24.67■■□□□ 1.54
TNFRSF25-203ENST00000351959 SLC5A1P13866 664 aa24.67■■□□□ 1.54
TNFRSF25-203ENST00000351959 SUPT20HQ8NEM7 779 aa24.67■■□□□ 1.54
TNFRSF25-203ENST00000351959 PSMD1Q99460 953 aa24.67■■□□□ 1.54
TNFRSF25-203ENST00000351959 BCL11AQ9H165 835 aa24.67■■□□□ 1.54
TNFRSF25-203ENST00000351959 CACNA1SQ13698 1873 aa24.67■■□□□ 1.54
TNFRSF25-203ENST00000351959 WTIPA6NIX2 430 aaPredicted RBP24.66■■□□□ 1.54
TNFRSF25-203ENST00000351959 IFIT2P09913 472 aaKnown RBP24.66■■□□□ 1.54
TNFRSF25-203ENST00000351959 LNPKQ9C0E8 428 aa24.66■■□□□ 1.54
TNFRSF25-203ENST00000351959 SNED1Q8TER0 1413 aa24.66■■□□□ 1.54
TNFRSF25-203ENST00000351959 C15orf52Q6ZUT6 534 aaKnown RBP24.65■■□□□ 1.54
TNFRSF25-203ENST00000351959 EYA3Q99504 573 aa24.65■■□□□ 1.54
TNFRSF25-203ENST00000351959 CCDC8Q9H0W5 538 aaPredicted RBP24.65■■□□□ 1.54
TNFRSF25-203ENST00000351959 ZNF609O15014 1411 aa24.63■■□□□ 1.53
TNFRSF25-203ENST00000351959 FKBP4Q02790 459 aaKnown RBP eCLIP24.63■■□□□ 1.53
TNFRSF25-203ENST00000351959 C16orf71Q8IYS4 520 aaPredicted RBP24.63■■□□□ 1.53
TNFRSF25-203ENST00000351959 PELP1Q8IZL8 1130 aaKnown RBP24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms