RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 AMOTL2Q9Y2J4 779 aa20.8■□□□□ 0.92
APP-202ENST00000348990 PTPDC1A2A3K4 754 aa20.8■□□□□ 0.92
APP-202ENST00000348990 GSDMDP57764 484 aa20.8■□□□□ 0.92
APP-202ENST00000348990 TPM4P67936 248 aa20.8■□□□□ 0.92
APP-202ENST00000348990 UBXN4Q92575 508 aa20.8■□□□□ 0.92
APP-202ENST00000348990 RBM6P78332 1123 aaKnown RBP20.79■□□□□ 0.92
APP-202ENST00000348990 NYAP1Q6ZVC0 841 aa20.79■□□□□ 0.92
APP-202ENST00000348990 ZBTB9Q96C00 473 aa20.79■□□□□ 0.92
APP-202ENST00000348990 TMX1Q9H3N1 280 aa20.79■□□□□ 0.92
APP-202ENST00000348990 C1orf141Q5JVX7 400 aa20.79■□□□□ 0.92
APP-202ENST00000348990 OTUD7BQ6GQQ9 843 aa20.79■□□□□ 0.92
APP-202ENST00000348990 URI1O94763 535 aaPredicted RBP20.79■□□□□ 0.92
APP-202ENST00000348990 FAM160A1Q05DH4 1040 aa20.79■□□□□ 0.92
APP-202ENST00000348990 SARM1Q6SZW1 724 aa20.79■□□□□ 0.92
APP-202ENST00000348990 SIRT1Q96EB6 747 aa20.79■□□□□ 0.92
APP-202ENST00000348990 XPO4Q9C0E2 1151 aaKnown RBP20.79■□□□□ 0.92
APP-202ENST00000348990 USP31Q70CQ4 1352 aa20.78■□□□□ 0.92
APP-202ENST00000348990 DDX58O95786 925 aaKnown RBP20.78■□□□□ 0.92
APP-202ENST00000348990 LMOD1P29536 600 aaPredicted RBP20.78■□□□□ 0.92
APP-202ENST00000348990 NEUROD6Q96NK8 337 aa20.78■□□□□ 0.92
APP-202ENST00000348990 KIF2AO00139 706 aaPredicted RBP20.78■□□□□ 0.92
APP-202ENST00000348990 ALDH1L1O75891 902 aa20.78■□□□□ 0.92
APP-202ENST00000348990 DHX40Q8IX18 779 aaKnown RBP20.78■□□□□ 0.92
APP-202ENST00000348990 ADCY9O60503 1353 aa20.78■□□□□ 0.92
APP-202ENST00000348990 NEXNQ0ZGT2 675 aa20.77■□□□□ 0.92
APP-202ENST00000348990 RAB11FIP4Q86YS3 637 aa20.77■□□□□ 0.92
APP-202ENST00000348990 LRRC59Q96AG4 307 aaKnown RBP20.77■□□□□ 0.92
APP-202ENST00000348990 BABAM1Q9NWV8 329 aa20.77■□□□□ 0.92
APP-202ENST00000348990 LRRN4CLQ8ND94 238 aa20.77■□□□□ 0.91
APP-202ENST00000348990 CYP21A2P08686 494 aa20.76■□□□□ 0.91
APP-202ENST00000348990 ARGLU1Q9NWB6 273 aaPredicted RBP20.76■□□□□ 0.91
APP-202ENST00000348990 TMCO3Q6UWJ1 677 aa20.76■□□□□ 0.91
APP-202ENST00000348990 U3KPZ7 1027 aaPredicted RBP20.76■□□□□ 0.91
APP-202ENST00000348990 MTX1Q13505 466 aa20.76■□□□□ 0.91
APP-202ENST00000348990 PTPN21Q16825 1174 aa20.76■□□□□ 0.91
APP-202ENST00000348990 SLFNL1Q499Z3 407 aa20.76■□□□□ 0.91
APP-202ENST00000348990 MRPS27Q92552 414 aaKnown RBP20.76■□□□□ 0.91
APP-202ENST00000348990 CALCOCO1Q9P1Z2 691 aa20.76■□□□□ 0.91
APP-202ENST00000348990 DPCR1Q3MIW9 517 aa20.75■□□□□ 0.91
APP-202ENST00000348990 NBPF6Q5VWK0 638 aa20.75■□□□□ 0.91
APP-202ENST00000348990 LINS1Q8NG48 757 aa20.75■□□□□ 0.91
APP-202ENST00000348990 NBPF4Q96M43 638 aa20.75■□□□□ 0.91
APP-202ENST00000348990 RCOR1Q9UKL0 485 aa20.75■□□□□ 0.91
APP-202ENST00000348990 PPP1R13BQ96KQ4 1090 aa20.75■□□□□ 0.91
APP-202ENST00000348990 SERPINC1P01008 464 aa20.74■□□□□ 0.91
APP-202ENST00000348990 PIP4K2AP48426 406 aaPredicted RBP20.74■□□□□ 0.91
APP-202ENST00000348990 CLCN6P51797 869 aa20.74■□□□□ 0.91
APP-202ENST00000348990 LTKP29376 864 aa20.73■□□□□ 0.91
APP-202ENST00000348990 HSP90AA4PQ58FG1 418 aa20.73■□□□□ 0.91
APP-202ENST00000348990 TEX35Q5T0J7 233 aa20.73■□□□□ 0.91
APP-202ENST00000348990 E4F1Q66K89 784 aaPredicted RBP20.73■□□□□ 0.91
APP-202ENST00000348990 PEAK1Q9H792 1746 aa20.73■□□□□ 0.91
APP-202ENST00000348990 SLC3A2P08195 630 aaKnown RBP20.73■□□□□ 0.91
APP-202ENST00000348990 GTF2E1P29083 439 aaPredicted RBP20.73■□□□□ 0.91
APP-202ENST00000348990 TFCP2Q12800 502 aa20.73■□□□□ 0.91
APP-202ENST00000348990 NSUN7Q8NE18 718 aaKnown RBP20.73■□□□□ 0.91
APP-202ENST00000348990 MYD88Q99836 296 aa20.73■□□□□ 0.91
APP-202ENST00000348990 ZNF446Q9NWS9 450 aa20.73■□□□□ 0.91
APP-202ENST00000348990 PCDHA7Q9UN72 937 aa20.73■□□□□ 0.91
APP-202ENST00000348990 EID1Q9Y6B2 187 aa20.73■□□□□ 0.91
APP-202ENST00000348990 SYNE3Q6ZMZ3 975 aa20.72■□□□□ 0.91
APP-202ENST00000348990 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.72■□□□□ 0.918e-12■□□□□ 8.1
APP-202ENST00000348990 PXDNLA1KZ92 1463 aa20.72■□□□□ 0.91
APP-202ENST00000348990 NDUFA8P51970 172 aa20.72■□□□□ 0.91
APP-202ENST00000348990 PDE4CQ08493 712 aa20.72■□□□□ 0.91
APP-202ENST00000348990 MCMDC2Q4G0Z9 681 aa20.72■□□□□ 0.91
APP-202ENST00000348990 PLEKHO1Q53GL0 409 aaPredicted RBP20.72■□□□□ 0.91
APP-202ENST00000348990 CFAP100Q494V2 611 aa20.72■□□□□ 0.91
APP-202ENST00000348990 PDILTQ8N807 584 aa20.72■□□□□ 0.91
APP-202ENST00000348990 TMEM51Q9NW97 253 aa20.72■□□□□ 0.91
APP-202ENST00000348990 GIGYF1O75420 1035 aaPredicted RBP20.71■□□□□ 0.91
APP-202ENST00000348990 GOLGA8FQ08AF8 430 aa20.71■□□□□ 0.91
APP-202ENST00000348990 GOLGA8DPQ0D2H9 430 aa20.71■□□□□ 0.91
APP-202ENST00000348990 DHX32Q7L7V1 743 aaKnown RBP20.71■□□□□ 0.91
APP-202ENST00000348990 CCDC150Q8NCX0 1101 aa20.71■□□□□ 0.91
APP-202ENST00000348990 DBNDD2Q9BQY9 259 aa20.71■□□□□ 0.91
APP-202ENST00000348990 C3P01024 1663 aa20.71■□□□□ 0.91
APP-202ENST00000348990 ITSN1Q15811 1721 aa20.71■□□□□ 0.91
APP-202ENST00000348990 NRKQ7Z2Y5 1582 aa20.71■□□□□ 0.91
APP-202ENST00000348990 IRX5P78411 483 aaPredicted RBP20.71■□□□□ 0.91
APP-202ENST00000348990 SETD1BQ9UPS6 1966 aaKnown RBP20.71■□□□□ 0.91
APP-202ENST00000348990 GOLIM4O00461 696 aa20.71■□□□□ 0.91
APP-202ENST00000348990 RBM33Q96EV2 1170 aaKnown RBP20.71■□□□□ 0.91
APP-202ENST00000348990 DBNLQ9UJU6 430 aaKnown RBP20.71■□□□□ 0.91
APP-202ENST00000348990 ARMCX5Q6P1M9 558 aa20.7■□□□□ 0.9
APP-202ENST00000348990 KAZALD1Q96I82 304 aa20.7■□□□□ 0.9
APP-202ENST00000348990 SEC31AO94979 1220 aaKnown RBP20.7■□□□□ 0.9
APP-202ENST00000348990 HOXB7P09629 217 aa20.7■□□□□ 0.9
APP-202ENST00000348990 NAA16Q6N069 864 aaPredicted RBP20.7■□□□□ 0.9
APP-202ENST00000348990 UTP14AQ9BVJ6 771 aaKnown RBP20.7■□□□□ 0.9
APP-202ENST00000348990 CARD6Q9BX69 1037 aa20.7■□□□□ 0.9
APP-202ENST00000348990 EPC1Q9H2F5 836 aa20.7■□□□□ 0.9
APP-202ENST00000348990 NPHP4O75161 1426 aaPredicted RBP20.7■□□□□ 0.9
APP-202ENST00000348990 CPLX1O14810 134 aa20.69■□□□□ 0.9
APP-202ENST00000348990 SLC39A6Q13433 755 aa20.69■□□□□ 0.9
APP-202ENST00000348990 KIAA1468Q9P260 1216 aa20.69■□□□□ 0.9
APP-202ENST00000348990 MON2Q7Z3U7 1717 aa20.69■□□□□ 0.9
APP-202ENST00000348990 ADD1P35611 737 aaKnown RBP20.69■□□□□ 0.9
APP-202ENST00000348990 NEK11Q8NG66 645 aa20.69■□□□□ 0.9
APP-202ENST00000348990 PFKFB2O60825 505 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms