RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 PLS1Q14651 629 aa17.72■□□□□ 0.43
PTPRO-202ENST00000348962 CWF19L2Q2TBE0 894 aaKnown RBP17.72■□□□□ 0.43
PTPRO-202ENST00000348962 ZFYVE9O95405 1425 aa17.72■□□□□ 0.43
PTPRO-202ENST00000348962 ABCC2Q92887 1545 aa17.72■□□□□ 0.43
PTPRO-202ENST00000348962 MACROD2A1Z1Q3 448 aa17.72■□□□□ 0.43
PTPRO-202ENST00000348962 SPDYE3A6NKU9 549 aa17.72■□□□□ 0.43
PTPRO-202ENST00000348962 PRC1O43663 620 aa17.72■□□□□ 0.43
PTPRO-202ENST00000348962 CTNNA2P26232 953 aa17.72■□□□□ 0.43
PTPRO-202ENST00000348962 SH2D4AQ9H788 454 aa17.72■□□□□ 0.43
PTPRO-202ENST00000348962 RMND1Q9NWS8 449 aa17.72■□□□□ 0.43
PTPRO-202ENST00000348962 NUCB1Q02818 461 aa17.71■□□□□ 0.43
PTPRO-202ENST00000348962 ORAI2Q96SN7 254 aa17.71■□□□□ 0.43
PTPRO-202ENST00000348962 YTHDC2Q9H6S0 1430 aaKnown RBP17.71■□□□□ 0.43
PTPRO-202ENST00000348962 TTC41PQ6P2S7 1318 aa17.71■□□□□ 0.43
PTPRO-202ENST00000348962 SDSP20132 328 aa17.71■□□□□ 0.43
PTPRO-202ENST00000348962 PPM1FP49593 454 aaPredicted RBP17.71■□□□□ 0.43
PTPRO-202ENST00000348962 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.71■□□□□ 0.43
PTPRO-202ENST00000348962 PA2G4Q9UQ80 394 aaKnown RBP17.71■□□□□ 0.43
PTPRO-202ENST00000348962 CALML3P27482 149 aa17.71■□□□□ 0.43
PTPRO-202ENST00000348962 UBXN4Q92575 508 aa17.71■□□□□ 0.43
PTPRO-202ENST00000348962 SLAIN2Q9P270 581 aa17.71■□□□□ 0.43
PTPRO-202ENST00000348962 HOOK3Q86VS8 718 aa17.71■□□□□ 0.43
PTPRO-202ENST00000348962 EXOC1Q9NV70 894 aa17.71■□□□□ 0.43
PTPRO-202ENST00000348962 DENND2AQ9ULE3 1009 aa17.71■□□□□ 0.43
PTPRO-202ENST00000348962 ITSN2Q9NZM3 1697 aa17.71■□□□□ 0.43
PTPRO-202ENST00000348962 UGGT2Q9NYU1 1516 aa17.7■□□□□ 0.42
PTPRO-202ENST00000348962 GOLGA6L7A0A1B0GV03 622 aa17.7■□□□□ 0.42
PTPRO-202ENST00000348962 RNF113AO15541 343 aaKnown RBP17.7■□□□□ 0.42
PTPRO-202ENST00000348962 PAFAH1B1P43034 410 aa17.7■□□□□ 0.42
PTPRO-202ENST00000348962 NCBP1Q09161 790 aaKnown RBP17.7■□□□□ 0.42
PTPRO-202ENST00000348962 GSTTP1A0A1W2PQM5 241 aa17.7■□□□□ 0.42
PTPRO-202ENST00000348962 ZNF790Q6PG37 636 aa17.7■□□□□ 0.42
PTPRO-202ENST00000348962 GBP3Q9H0R5 595 aa17.7■□□□□ 0.42
PTPRO-202ENST00000348962 ARHGEF10O15013 1369 aa17.7■□□□□ 0.42
PTPRO-202ENST00000348962 CCDC172P0C7W6 258 aa17.7■□□□□ 0.42
PTPRO-202ENST00000348962 LUZP1Q86V48 1076 aa17.69■□□□□ 0.42
PTPRO-202ENST00000348962 CTNNBL1Q8WYA6 563 aaPredicted RBP17.69■□□□□ 0.42
PTPRO-202ENST00000348962 PUF60Q9UHX1 559 aaKnown RBP17.69■□□□□ 0.42
PTPRO-202ENST00000348962 ATP10AO60312 1499 aa17.69■□□□□ 0.42
PTPRO-202ENST00000348962 BABAM1Q9NWV8 329 aa17.69■□□□□ 0.42
PTPRO-202ENST00000348962 BAG6P46379 1132 aa17.69■□□□□ 0.42
PTPRO-202ENST00000348962 KIF4BQ2VIQ3 1234 aa17.69■□□□□ 0.42
PTPRO-202ENST00000348962 RRP36Q96EU6 259 aaKnown RBP17.69■□□□□ 0.42
PTPRO-202ENST00000348962 FERMT1Q9BQL6 677 aa17.69■□□□□ 0.42
PTPRO-202ENST00000348962 PPFIA3O75145 1194 aa17.69■□□□□ 0.42
PTPRO-202ENST00000348962 GJA3Q9Y6H8 435 aa17.69■□□□□ 0.42
PTPRO-202ENST00000348962 EIF4G3O43432 1585 aaKnown RBP17.69■□□□□ 0.42
PTPRO-202ENST00000348962 BIN1O00499 593 aa17.68■□□□□ 0.42
PTPRO-202ENST00000348962 CAVIN2O95810 425 aa17.68■□□□□ 0.42
PTPRO-202ENST00000348962 FAM98CQ17RN3 349 aaKnown RBP17.68■□□□□ 0.42
PTPRO-202ENST00000348962 MAGEB6Q8N7X4 407 aa17.68■□□□□ 0.42
PTPRO-202ENST00000348962 CPLX3Q8WVH0 158 aa17.68■□□□□ 0.42
PTPRO-202ENST00000348962 RTL9Q8NET4 1388 aa17.68■□□□□ 0.42
PTPRO-202ENST00000348962 PLBD2Q8NHP8 589 aa17.68■□□□□ 0.42
PTPRO-202ENST00000348962 TCHPQ9BT92 498 aa17.68■□□□□ 0.42
PTPRO-202ENST00000348962 UFL1O94874 794 aa17.68■□□□□ 0.42
PTPRO-202ENST00000348962 STX1AQ16623 288 aa17.68■□□□□ 0.42
PTPRO-202ENST00000348962 MIGA1Q8NAN2 632 aa17.68■□□□□ 0.42
PTPRO-202ENST00000348962 USP21Q9UK80 565 aa17.68■□□□□ 0.42
PTPRO-202ENST00000348962 VAMP4O75379 141 aa17.68■□□□□ 0.42
PTPRO-202ENST00000348962 SSFA2P28290 1259 aa17.67■□□□□ 0.42
PTPRO-202ENST00000348962 TRIM47Q96LD4 638 aa17.67■□□□□ 0.42
PTPRO-202ENST00000348962 MAP3K9P80192 1104 aa17.67■□□□□ 0.42
PTPRO-202ENST00000348962 PTPN14Q15678 1187 aa17.67■□□□□ 0.42
PTPRO-202ENST00000348962 LRRC2Q9BYS8 371 aa17.67■□□□□ 0.42
PTPRO-202ENST00000348962 A0A1W2PP64 1363 aa17.67■□□□□ 0.42
PTPRO-202ENST00000348962 KRT13P13646 458 aa17.67■□□□□ 0.42
PTPRO-202ENST00000348962 KCNG4Q8TDN1 519 aa17.67■□□□□ 0.42
PTPRO-202ENST00000348962 ESYT1Q9BSJ8 1104 aa17.67■□□□□ 0.42
PTPRO-202ENST00000348962 H0YIN7 160 aa17.67■□□□□ 0.42
PTPRO-202ENST00000348962 GNA11P29992 359 aa17.67■□□□□ 0.42
PTPRO-202ENST00000348962 SYKP43405 635 aa17.67■□□□□ 0.42
PTPRO-202ENST00000348962 FAM193AP78312 1265 aa17.67■□□□□ 0.42
PTPRO-202ENST00000348962 TBC1D2Q9BYX2 928 aa17.67■□□□□ 0.42
PTPRO-202ENST00000348962 STAT6P42226 847 aa17.66■□□□□ 0.42
PTPRO-202ENST00000348962 TAF3Q5VWG9 929 aa17.66■□□□□ 0.42
PTPRO-202ENST00000348962 FAM89AQ96GI7 184 aa17.66■□□□□ 0.42
PTPRO-202ENST00000348962 PHACTR2O75167 634 aa17.66■□□□□ 0.42
PTPRO-202ENST00000348962 KIAA0754O94854 1291 aa17.66■□□□□ 0.42
PTPRO-202ENST00000348962 HOXB7P09629 217 aa17.66■□□□□ 0.42
PTPRO-202ENST00000348962 PDE6BP35913 854 aa17.66■□□□□ 0.42
PTPRO-202ENST00000348962 EIF6P56537 245 aaKnown RBP17.66■□□□□ 0.42
PTPRO-202ENST00000348962 CRACR2AQ9BSW2 395 aa17.66■□□□□ 0.42
PTPRO-202ENST00000348962 CLIP2Q9UDT6 1046 aa17.66■□□□□ 0.42
PTPRO-202ENST00000348962 GGA1Q9UJY5 639 aa17.66■□□□□ 0.42
PTPRO-202ENST00000348962 MAST3O60307 1309 aa17.66■□□□□ 0.42
PTPRO-202ENST00000348962 TFCP2Q12800 502 aa17.66■□□□□ 0.42
PTPRO-202ENST00000348962 HIBADHP31937 336 aaKnown RBP17.65■□□□□ 0.42
PTPRO-202ENST00000348962 PRIM1P49642 420 aaKnown RBP17.65■□□□□ 0.42
PTPRO-202ENST00000348962 PHACTR3Q96KR7 559 aa17.65■□□□□ 0.42
PTPRO-202ENST00000348962 ALS2CR12Q96Q35 445 aa17.65■□□□□ 0.42
PTPRO-202ENST00000348962 SBNO1A3KN83 1393 aa17.65■□□□□ 0.42
PTPRO-202ENST00000348962 CA8P35219 290 aa17.65■□□□□ 0.42
PTPRO-202ENST00000348962 TEX11Q8IYF3 940 aa17.65■□□□□ 0.42
PTPRO-202ENST00000348962 HOOK2Q96ED9 719 aa17.65■□□□□ 0.42
PTPRO-202ENST00000348962 CCDC87Q9NVE4 849 aa17.65■□□□□ 0.42
PTPRO-202ENST00000348962 TRIM75PA6NK02 468 aa17.65■□□□□ 0.42
PTPRO-202ENST00000348962 IGHDP01880 384 aa17.65■□□□□ 0.42
PTPRO-202ENST00000348962 NMIQ13287 307 aaPredicted RBP17.65■□□□□ 0.42
PTPRO-202ENST00000348962 KRT79Q5XKE5 535 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms