RNA–Protein interactions for RNA: ENST00000348386.7

CAST-205, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-205ENST00000348386 GOPCQ9HD26 462 aa9.6□□□□□ -0.87
CAST-205ENST00000348386 HDAC5Q9UQL6 1122 aa9.6□□□□□ -0.87
CAST-205ENST00000348386 PARP3Q9Y6F1 533 aa9.6□□□□□ -0.87
CAST-205ENST00000348386 UBR3Q6ZT12 1888 aa9.6□□□□□ -0.87
CAST-205ENST00000348386 POLRMTO00411 1230 aaKnown RBP9.59□□□□□ -0.87
CAST-205ENST00000348386 FOXO4P98177 505 aa9.59□□□□□ -0.87
CAST-205ENST00000348386 ATP8B2P98198 1209 aa9.59□□□□□ -0.87
CAST-205ENST00000348386 AAMPQ13685 434 aa9.59□□□□□ -0.87
CAST-205ENST00000348386 RPAP2Q8IXW5 612 aaPredicted RBP9.59□□□□□ -0.87
CAST-205ENST00000348386 ANKRD44Q8N8A2 993 aa9.59□□□□□ -0.87
CAST-205ENST00000348386 RWDD1Q9H446 243 aaPredicted RBP9.59□□□□□ -0.87
CAST-205ENST00000348386 NUP188Q5SRE5 1749 aa9.59□□□□□ -0.87
CAST-205ENST00000348386 CARMIL3Q8ND23 1372 aa9.59□□□□□ -0.87
CAST-205ENST00000348386 C1QBPQ07021 282 aaKnown RBP9.59□□□□□ -0.87
CAST-205ENST00000348386 TTLL12Q14166 644 aaPredicted RBP9.59□□□□□ -0.87
CAST-205ENST00000348386 MFSD10Q14728 455 aa9.59□□□□□ -0.87
CAST-205ENST00000348386 PRR5LQ6MZQ0 368 aa9.59□□□□□ -0.87
CAST-205ENST00000348386 KLHDC4Q8TBB5 520 aa9.59□□□□□ -0.87
CAST-205ENST00000348386 PDE8AO60658 829 aa9.58□□□□□ -0.88
CAST-205ENST00000348386 CAMK2BQ13554 666 aa9.58□□□□□ -0.88
CAST-205ENST00000348386 C3orf67Q6ZVT6 689 aa9.58□□□□□ -0.88
CAST-205ENST00000348386 DDX27Q96GQ7 796 aaKnown RBP9.58□□□□□ -0.88
CAST-205ENST00000348386 PA2G4Q9UQ80 394 aaKnown RBP9.58□□□□□ -0.88
CAST-205ENST00000348386 IRF6O14896 467 aa9.58□□□□□ -0.88
CAST-205ENST00000348386 CTSWP56202 376 aa9.58□□□□□ -0.88
CAST-205ENST00000348386 ST5P78524 1137 aa9.58□□□□□ -0.88
CAST-205ENST00000348386 SIL1Q9H173 461 aa9.58□□□□□ -0.88
CAST-205ENST00000348386 CREBZFQ9NS37 354 aa9.58□□□□□ -0.88
CAST-205ENST00000348386 CDHR2Q9BYE9 1310 aa9.58□□□□□ -0.88
CAST-205ENST00000348386 ABCC12Q96J65 1359 aa9.58□□□□□ -0.88
CAST-205ENST00000348386 NUP98P52948 1817 aa9.57□□□□□ -0.88
CAST-205ENST00000348386 C4AP0C0L4 1744 aa9.57□□□□□ -0.88
CAST-205ENST00000348386 HMMRO75330 724 aa9.57□□□□□ -0.88
CAST-205ENST00000348386 FAM161AQ3B820 660 aa9.57□□□□□ -0.88
CAST-205ENST00000348386 PROCA1Q8NCQ7 364 aaPredicted RBP9.57□□□□□ -0.88
CAST-205ENST00000348386 TTLL11Q8NHH1 800 aa9.57□□□□□ -0.88
CAST-205ENST00000348386 OXER1Q8TDS5 423 aa9.57□□□□□ -0.88
CAST-205ENST00000348386 ZNF594Q96JF6 807 aaPredicted RBP9.57□□□□□ -0.88
CAST-205ENST00000348386 NLRP3Q96P20 1036 aa9.57□□□□□ -0.88
CAST-205ENST00000348386 CRISPLD2Q9H0B8 497 aa9.57□□□□□ -0.88
CAST-205ENST00000348386 GREM2Q9H772 168 aa9.57□□□□□ -0.88
CAST-205ENST00000348386 EXOC6BQ9Y2D4 811 aa9.57□□□□□ -0.88
CAST-205ENST00000348386 SURF6O75683 361 aaKnown RBP9.57□□□□□ -0.88
CAST-205ENST00000348386 SLC16A10Q8TF71 515 aa9.57□□□□□ -0.88
CAST-205ENST00000348386 SCN7AQ01118 1682 aa9.56□□□□□ -0.88
CAST-205ENST00000348386 OS9Q13438 667 aaPredicted RBP9.56□□□□□ -0.88
CAST-205ENST00000348386 HDAC1Q13547 482 aaPredicted RBP9.56□□□□□ -0.88
CAST-205ENST00000348386 CCDC57Q2TAC2 916 aa9.56□□□□□ -0.88
CAST-205ENST00000348386 RABL6Q3YEC7 729 aaPredicted RBP9.56□□□□□ -0.88
CAST-205ENST00000348386 TAF7LQ5H9L4 462 aa9.56□□□□□ -0.88
CAST-205ENST00000348386 PCMTD1Q96MG8 357 aaPredicted RBP9.56□□□□□ -0.88
CAST-205ENST00000348386 SEC31BQ9NQW1 1179 aa9.56□□□□□ -0.88
CAST-205ENST00000348386 PPP1R1BQ9UD71 204 aaPredicted RBP9.56□□□□□ -0.88
CAST-205ENST00000348386 ITGA6P23229 1130 aa9.56□□□□□ -0.88
CAST-205ENST00000348386 IFIT5Q13325 482 aaKnown RBP9.56□□□□□ -0.88
CAST-205ENST00000348386 SKAP1Q86WV1 359 aa9.56□□□□□ -0.88
CAST-205ENST00000348386 EFCAB3Q8N7B9 438 aa9.56□□□□□ -0.88
CAST-205ENST00000348386 SSH3Q8TE77 659 aa9.56□□□□□ -0.88
CAST-205ENST00000348386 PLA2G12BQ9BX93 195 aa9.56□□□□□ -0.88
CAST-205ENST00000348386 MTFR1LQ9H019 292 aa9.56□□□□□ -0.88
CAST-205ENST00000348386 IGSF5Q9NSI5 407 aa9.56□□□□□ -0.88
CAST-205ENST00000348386 AFDNP55196 1824 aaKnown RBP9.55□□□□□ -0.88
CAST-205ENST00000348386 TUBGCP6Q96RT7 1819 aa9.55□□□□□ -0.88
CAST-205ENST00000348386 BCORQ6W2J9 1755 aa9.55□□□□□ -0.88
CAST-205ENST00000348386 IBTKQ9P2D0 1353 aaPredicted RBP9.55□□□□□ -0.88
CAST-205ENST00000348386 CSF1RP07333 972 aa9.55□□□□□ -0.88
CAST-205ENST00000348386 MTX1Q13505 466 aa9.55□□□□□ -0.88
CAST-205ENST00000348386 CCDC152Q4G0S7 254 aa9.55□□□□□ -0.88
CAST-205ENST00000348386 SLC10A5Q5PT55 438 aa9.55□□□□□ -0.88
CAST-205ENST00000348386 ANKRD18BA2A2Z9 1011 aa9.54□□□□□ -0.88
CAST-205ENST00000348386 DPYSL4O14531 572 aa9.54□□□□□ -0.88
CAST-205ENST00000348386 POLD1P28340 1107 aa9.54□□□□□ -0.88
CAST-205ENST00000348386 MAP2K5Q13163 448 aa9.54□□□□□ -0.88
CAST-205ENST00000348386 ANKRD45Q5TZF3 282 aa9.54□□□□□ -0.88
CAST-205ENST00000348386 SNRKQ9NRH2 765 aa9.54□□□□□ -0.88
CAST-205ENST00000348386 POM121CA8CG34 1229 aa9.54□□□□□ -0.88
CAST-205ENST00000348386 RFX5P48382 616 aaPredicted RBP9.54□□□□□ -0.88
CAST-205ENST00000348386 PTPN12Q05209 780 aaKnown RBP9.54□□□□□ -0.88
CAST-205ENST00000348386 CENPQQ7L2Z9 268 aaPredicted RBP9.54□□□□□ -0.88
CAST-205ENST00000348386 PUS3Q9BZE2 481 aaKnown RBP9.54□□□□□ -0.88
CAST-205ENST00000348386 DCTPP1Q9H773 170 aa9.54□□□□□ -0.88
CAST-205ENST00000348386 SMARCA5O60264 1052 aaPredicted RBP9.53□□□□□ -0.88
CAST-205ENST00000348386 G3BP1Q13283 466 aaKnown RBP eCLIP9.53□□□□□ -0.88
CAST-205ENST00000348386 RPGRQ92834 1020 aaKnown RBP9.53□□□□□ -0.88
CAST-205ENST00000348386 IVNS1ABPQ9Y6Y0 642 aa9.53□□□□□ -0.88
CAST-205ENST00000348386 KDM2BQ8NHM5 1336 aa9.53□□□□□ -0.88
CAST-205ENST00000348386 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.53□□□□□ -0.88
CAST-205ENST00000348386 SF3B3Q15393 1217 aaKnown RBP9.53□□□□□ -0.88
CAST-205ENST00000348386 LRRC24Q50LG9 513 aa9.53□□□□□ -0.88
CAST-205ENST00000348386 LDHAL6AQ6ZMR3 332 aa9.53□□□□□ -0.88
CAST-205ENST00000348386 DDX46Q7L014 1031 aaKnown RBP9.53□□□□□ -0.88
CAST-205ENST00000348386 BRIP1Q9BX63 1249 aa9.53□□□□□ -0.88
CAST-205ENST00000348386 IL1RAPL2Q9NP60 686 aa9.53□□□□□ -0.88
CAST-205ENST00000348386 WWC3Q9ULE0 1092 aa9.53□□□□□ -0.88
CAST-205ENST00000348386 ANKRD36CQ5JPF3 1778 aa9.52□□□□□ -0.88
CAST-205ENST00000348386 SOCS7O14512 581 aa9.52□□□□□ -0.89
CAST-205ENST00000348386 CHRNA5P30532 468 aa9.52□□□□□ -0.89
CAST-205ENST00000348386 CELF1Q92879 486 aaKnown RBP9.52□□□□□ -0.89
CAST-205ENST00000348386 ZNF622Q969S3 477 aaKnown RBP eCLIP9.52□□□□□ -0.891e-7■■□□□ 14.4
CAST-205ENST00000348386 GCC1Q96CN9 775 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms