RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 KRT26Q7Z3Y9 468 aa12.55□□□□□ -0.4
MRPL55-204ENST00000348259 CCDC102AQ96A19 550 aa12.55□□□□□ -0.4
MRPL55-204ENST00000348259 CSRNP1Q96S65 589 aa12.55□□□□□ -0.4
MRPL55-204ENST00000348259 DBNDD1Q9H9R9 158 aa12.55□□□□□ -0.4
MRPL55-204ENST00000348259 TRMT112Q9UI30 125 aaKnown RBP12.55□□□□□ -0.4
MRPL55-204ENST00000348259 ZNF521Q96K83 1311 aa12.55□□□□□ -0.4
MRPL55-204ENST00000348259 VIL1P09327 827 aaKnown RBP12.54□□□□□ -0.4
MRPL55-204ENST00000348259 GPSM2P81274 684 aa12.54□□□□□ -0.4
MRPL55-204ENST00000348259 WASHC4Q2M389 1173 aa12.54□□□□□ -0.4
MRPL55-204ENST00000348259 RUNDC1Q96C34 613 aa12.54□□□□□ -0.4
MRPL55-204ENST00000348259 PNNQ9H307 717 aaKnown RBP12.54□□□□□ -0.4
MRPL55-204ENST00000348259 ASTN2O75129 1339 aaPredicted RBP12.54□□□□□ -0.4
MRPL55-204ENST00000348259 CHL1O00533 1208 aa12.53□□□□□ -0.4
MRPL55-204ENST00000348259 ECE2O60344 883 aa12.53□□□□□ -0.4
MRPL55-204ENST00000348259 ZNF280AP59817 542 aaPredicted RBP12.53□□□□□ -0.4
MRPL55-204ENST00000348259 TRIM28Q13263 835 aaKnown RBP12.53□□□□□ -0.4
MRPL55-204ENST00000348259 KRT24Q2M2I5 525 aa12.53□□□□□ -0.4
MRPL55-204ENST00000348259 RASAL3Q86YV0 1011 aa12.53□□□□□ -0.4
MRPL55-204ENST00000348259 TBC1D16Q8TBP0 767 aa12.53□□□□□ -0.4
MRPL55-204ENST00000348259 GMLQ99445 158 aa12.53□□□□□ -0.4
MRPL55-204ENST00000348259 PODXL2Q9NZ53 605 aa12.53□□□□□ -0.4
MRPL55-204ENST00000348259 CENPFP49454 3210 aa12.53□□□□□ -0.4
MRPL55-204ENST00000348259 TRPA1O75762 1119 aa12.52□□□□□ -0.41
MRPL55-204ENST00000348259 NEFMP07197 916 aa12.52□□□□□ -0.41
MRPL55-204ENST00000348259 TMPOP42166 694 aaKnown RBP12.52□□□□□ -0.41
MRPL55-204ENST00000348259 SOX10P56693 466 aa12.52□□□□□ -0.41
MRPL55-204ENST00000348259 CCDC27Q2M243 656 aa12.52□□□□□ -0.41
MRPL55-204ENST00000348259 C2orf69Q8N8R5 385 aa12.52□□□□□ -0.41
MRPL55-204ENST00000348259 BRCA2P51587 3418 aa12.52□□□□□ -0.41
MRPL55-204ENST00000348259 ZNF157P51786 506 aaPredicted RBP12.51□□□□□ -0.41
MRPL55-204ENST00000348259 RIPK4P57078 832 aa12.51□□□□□ -0.41
MRPL55-204ENST00000348259 AIMP1Q12904 312 aaKnown RBP12.51□□□□□ -0.41
MRPL55-204ENST00000348259 KIF4BQ2VIQ3 1234 aa12.51□□□□□ -0.41
MRPL55-204ENST00000348259 CTU1Q7Z7A3 348 aaKnown RBP12.51□□□□□ -0.41
MRPL55-204ENST00000348259 PLBD2Q8NHP8 589 aa12.51□□□□□ -0.41
MRPL55-204ENST00000348259 CDCA5Q96FF9 252 aa12.51□□□□□ -0.41
MRPL55-204ENST00000348259 FAM89AQ96GI7 184 aa12.51□□□□□ -0.41
MRPL55-204ENST00000348259 GGA3Q9NZ52 723 aa12.51□□□□□ -0.41
MRPL55-204ENST00000348259 CHPF2Q9P2E5 772 aa12.51□□□□□ -0.41
MRPL55-204ENST00000348259 NSFL1CQ9UNZ2 370 aaKnown RBP12.51□□□□□ -0.41
MRPL55-204ENST00000348259 MAPK8IP3Q9UPT6 1336 aa12.51□□□□□ -0.41
MRPL55-204ENST00000348259 APAF1O14727 1248 aa12.5□□□□□ -0.41
MRPL55-204ENST00000348259 RIMBP2O15034 1052 aa12.5□□□□□ -0.41
MRPL55-204ENST00000348259 HOXB7P09629 217 aa12.5□□□□□ -0.41
MRPL55-204ENST00000348259 PRPF38BQ5VTL8 546 aaKnown RBP12.5□□□□□ -0.41
MRPL55-204ENST00000348259 NECTIN2Q92692 538 aa12.5□□□□□ -0.41
MRPL55-204ENST00000348259 DCPSQ96C86 337 aaKnown RBP12.5□□□□□ -0.41
MRPL55-204ENST00000348259 CFAP44Q96MT7 982 aa12.5□□□□□ -0.41
MRPL55-204ENST00000348259 RBBP6Q7Z6E9 1792 aaKnown RBP12.5□□□□□ -0.41
MRPL55-204ENST00000348259 MYH3P11055 1940 aa12.49□□□□□ -0.41
MRPL55-204ENST00000348259 PITPNM2Q9BZ72 1349 aa12.49□□□□□ -0.41
MRPL55-204ENST00000348259 RPS8P62241 208 aaKnown RBP12.49□□□□□ -0.41
MRPL55-204ENST00000348259 FKBP1BP68106 108 aa12.49□□□□□ -0.41
MRPL55-204ENST00000348259 DOK7Q18PE1 504 aa12.49□□□□□ -0.41
MRPL55-204ENST00000348259 NOM1Q5C9Z4 860 aaKnown RBP12.49□□□□□ -0.41
MRPL55-204ENST00000348259 ERICH6BQ5W0A0 696 aa12.49□□□□□ -0.41
MRPL55-204ENST00000348259 REM2Q8IYK8 340 aaPredicted RBP12.49□□□□□ -0.41
MRPL55-204ENST00000348259 TRMT2AQ8IZ69 625 aaKnown RBP12.49□□□□□ -0.41
MRPL55-204ENST00000348259 EYA3Q99504 573 aa12.49□□□□□ -0.41
MRPL55-204ENST00000348259 TRIM35Q9UPQ4 493 aa12.49□□□□□ -0.41
MRPL55-204ENST00000348259 C6orf229H3BNL8 230 aa12.48□□□□□ -0.41
MRPL55-204ENST00000348259 NEFLP07196 543 aa12.48□□□□□ -0.41
MRPL55-204ENST00000348259 GOLGA2Q08379 1002 aa12.48□□□□□ -0.41
MRPL55-204ENST00000348259 ANKRD13DQ6ZTN6 518 aa12.48□□□□□ -0.41
MRPL55-204ENST00000348259 CCDC146Q8IYE0 955 aa12.48□□□□□ -0.41
MRPL55-204ENST00000348259 AGBL3Q8NEM8 1001 aa12.48□□□□□ -0.41
MRPL55-204ENST00000348259 ZNF428Q96B54 188 aa12.48□□□□□ -0.41
MRPL55-204ENST00000348259 HPS5Q9UPZ3 1129 aa12.48□□□□□ -0.41
MRPL55-204ENST00000348259 SPEF2Q9C093 1822 aa12.48□□□□□ -0.41
MRPL55-204ENST00000348259 ATP5J2-PTCD1G3V325 749 aa12.47□□□□□ -0.41
MRPL55-204ENST00000348259 IRS4O14654 1257 aaPredicted RBP12.47□□□□□ -0.41
MRPL55-204ENST00000348259 LMOD3Q0VAK6 560 aa12.47□□□□□ -0.41
MRPL55-204ENST00000348259 RBM26Q5T8P6 1007 aaKnown RBP12.47□□□□□ -0.41
MRPL55-204ENST00000348259 ANGEL2Q5VTE6 544 aaKnown RBP12.47□□□□□ -0.41
MRPL55-204ENST00000348259 RSBN1LQ6PCB5 846 aaPredicted RBP12.47□□□□□ -0.41
MRPL55-204ENST00000348259 WDR63Q8IWG1 891 aa12.47□□□□□ -0.41
MRPL55-204ENST00000348259 SULF1Q8IWU6 871 aa12.47□□□□□ -0.41
MRPL55-204ENST00000348259 CFHR5Q9BXR6 569 aa12.47□□□□□ -0.41
MRPL55-204ENST00000348259 SEC31BQ9NQW1 1179 aa12.47□□□□□ -0.41
MRPL55-204ENST00000348259 SUPT16HQ9Y5B9 1047 aaKnown RBP12.47□□□□□ -0.41
MRPL55-204ENST00000348259 SLFN5Q08AF3 891 aa12.46□□□□□ -0.41
MRPL55-204ENST00000348259 SCARF1Q14162 830 aa12.46□□□□□ -0.41
MRPL55-204ENST00000348259 HDGFL1Q5TGJ6 251 aa12.46□□□□□ -0.41
MRPL55-204ENST00000348259 WWC1Q8IX03 1113 aa12.46□□□□□ -0.41
MRPL55-204ENST00000348259 E9PSI1 815 aa12.45□□□□□ -0.42
MRPL55-204ENST00000348259 TM4SF4P48230 202 aa12.45□□□□□ -0.42
MRPL55-204ENST00000348259 MOB2Q70IA6 237 aa12.45□□□□□ -0.42
MRPL55-204ENST00000348259 ZBTB38Q8NAP3 1195 aaPredicted RBP12.45□□□□□ -0.42
MRPL55-204ENST00000348259 ZNF296Q8WUU4 475 aaPredicted RBP12.45□□□□□ -0.42
MRPL55-204ENST00000348259 ZC3H12CQ9C0D7 883 aaKnown RBP12.45□□□□□ -0.42
MRPL55-204ENST00000348259 DBF4Q9UBU7 674 aaPredicted RBP12.45□□□□□ -0.42
MRPL55-204ENST00000348259 SALL2Q9Y467 1007 aaPredicted RBP12.45□□□□□ -0.42
MRPL55-204ENST00000348259 ECM29Q5VYK3 1845 aa12.45□□□□□ -0.42
MRPL55-204ENST00000348259 A0A1B0GUL6 1792 aa12.44□□□□□ -0.42
MRPL55-204ENST00000348259 UFL1O94874 794 aa12.44□□□□□ -0.42
MRPL55-204ENST00000348259 ZNF853P0CG23 659 aa12.44□□□□□ -0.42
MRPL55-204ENST00000348259 PKN2Q16513 984 aaKnown RBP12.44□□□□□ -0.42
MRPL55-204ENST00000348259 DUSP27Q5VZP5 1158 aa12.44□□□□□ -0.42
MRPL55-204ENST00000348259 CDCA7LQ96GN5 454 aa12.44□□□□□ -0.42
MRPL55-204ENST00000348259 MYOZ2Q9NPC6 264 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms