RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 GNAI2P04899 355 aa14.81□□□□□ -0.04
SNCA-202ENST00000345009 YBX3P16989 372 aaKnown RBP eCLIP14.81□□□□□ -0.04
SNCA-202ENST00000345009 IGHMBP2P38935 993 aaKnown RBP14.81□□□□□ -0.04
SNCA-202ENST00000345009 FOXO4P98177 505 aa14.81□□□□□ -0.04
SNCA-202ENST00000345009 CCDC93Q567U6 631 aa14.81□□□□□ -0.04
SNCA-202ENST00000345009 PANK1Q8TE04 598 aa14.81□□□□□ -0.04
SNCA-202ENST00000345009 SUCLG2Q96I99 432 aa14.81□□□□□ -0.04
SNCA-202ENST00000345009 MPHOSPH8Q99549 860 aa14.81□□□□□ -0.04
SNCA-202ENST00000345009 GREM2Q9H772 168 aa14.81□□□□□ -0.04
SNCA-202ENST00000345009 DDX19BQ9UMR2 479 aa14.81□□□□□ -0.04
SNCA-202ENST00000345009 RTL9Q8NET4 1388 aa14.81□□□□□ -0.04
SNCA-202ENST00000345009 RLBP1P12271 317 aa14.8□□□□□ -0.04
SNCA-202ENST00000345009 ITGA6P23229 1130 aa14.8□□□□□ -0.04
SNCA-202ENST00000345009 SP8Q8IXZ3 490 aa14.8□□□□□ -0.04
SNCA-202ENST00000345009 MEIS3Q99687 375 aa14.8□□□□□ -0.04
SNCA-202ENST00000345009 BICC1Q9H694 974 aaKnown RBP14.8□□□□□ -0.04
SNCA-202ENST00000345009 TNNQ9UQP3 1299 aa14.8□□□□□ -0.04
SNCA-202ENST00000345009 ATP6V0A2Q9Y487 856 aa14.8□□□□□ -0.04
SNCA-202ENST00000345009 RRP1P56182 461 aaKnown RBP14.79□□□□□ -0.04
SNCA-202ENST00000345009 MVPQ14764 893 aaKnown RBP14.79□□□□□ -0.04
SNCA-202ENST00000345009 FAM161AQ3B820 660 aa14.79□□□□□ -0.04
SNCA-202ENST00000345009 C7orf43Q8WVR3 580 aa14.79□□□□□ -0.04
SNCA-202ENST00000345009 SEC31BQ9NQW1 1179 aa14.79□□□□□ -0.04
SNCA-202ENST00000345009 ZBTB7BO15156 539 aaPredicted RBP14.78□□□□□ -0.04
SNCA-202ENST00000345009 RABL6Q3YEC7 729 aaPredicted RBP14.78□□□□□ -0.04
SNCA-202ENST00000345009 EPHA10Q5JZY3 1008 aa14.78□□□□□ -0.04
SNCA-202ENST00000345009 CELF1Q92879 486 aaKnown RBP14.78□□□□□ -0.04
SNCA-202ENST00000345009 BSDC1Q9NW68 430 aaPredicted RBP14.78□□□□□ -0.04
SNCA-202ENST00000345009 COG6Q9Y2V7 657 aa14.78□□□□□ -0.04
SNCA-202ENST00000345009 PCDHB13Q9Y5F0 798 aa14.78□□□□□ -0.04
SNCA-202ENST00000345009 LRRFIP2Q9Y608 721 aaKnown RBP14.78□□□□□ -0.04
SNCA-202ENST00000345009 SUPT20HQ8NEM7 779 aa14.77□□□□□ -0.05
SNCA-202ENST00000345009 KAZALD1Q96I82 304 aa14.77□□□□□ -0.05
SNCA-202ENST00000345009 TAOK3Q9H2K8 898 aa14.77□□□□□ -0.05
SNCA-202ENST00000345009 DDX60Q8IY21 1712 aaKnown RBP14.77□□□□□ -0.05
SNCA-202ENST00000345009 TNRC6CQ9HCJ0 1690 aaKnown RBP14.77□□□□□ -0.05
SNCA-202ENST00000345009 DLEC1Q9Y238 1755 aa14.76□□□□□ -0.05
SNCA-202ENST00000345009 KIAA1551Q9HCM1 1747 aa14.76□□□□□ -0.05
SNCA-202ENST00000345009 DPP8Q6V1X1 898 aaPredicted RBP14.76□□□□□ -0.05
SNCA-202ENST00000345009 MPNDQ8N594 471 aa14.76□□□□□ -0.05
SNCA-202ENST00000345009 ANKIB1Q9P2G1 1089 aa14.76□□□□□ -0.05
SNCA-202ENST00000345009 MYH3P11055 1940 aa14.76□□□□□ -0.05
SNCA-202ENST00000345009 LAMB2P55268 1798 aa14.75□□□□□ -0.05
SNCA-202ENST00000345009 CENPBP07199 599 aaPredicted RBP14.75□□□□□ -0.05
SNCA-202ENST00000345009 LDHAL6AQ6ZMR3 332 aa14.75□□□□□ -0.05
SNCA-202ENST00000345009 ANKRD44Q8N8A2 993 aa14.75□□□□□ -0.05
SNCA-202ENST00000345009 PSMD1Q99460 953 aa14.75□□□□□ -0.05
SNCA-202ENST00000345009 ANKRD2Q9GZV1 360 aa14.75□□□□□ -0.05
SNCA-202ENST00000345009 CNNM1Q9NRU3 951 aa14.75□□□□□ -0.05
SNCA-202ENST00000345009 NSFL1CQ9UNZ2 370 aaKnown RBP14.75□□□□□ -0.05
SNCA-202ENST00000345009 SUPT16HQ9Y5B9 1047 aaKnown RBP14.75□□□□□ -0.05
SNCA-202ENST00000345009 SLX4Q8IY92 1834 aa14.75□□□□□ -0.05
SNCA-202ENST00000345009 COL11A2P13942 1736 aaPredicted RBP14.75□□□□□ -0.05
SNCA-202ENST00000345009 BRCA1P38398 1863 aaKnown RBP14.74□□□□□ -0.05
SNCA-202ENST00000345009 LTBP3Q9NS15 1303 aa14.74□□□□□ -0.05
SNCA-202ENST00000345009 SRGAP3O43295 1099 aa14.74□□□□□ -0.05
SNCA-202ENST00000345009 LMNB1P20700 586 aa14.74□□□□□ -0.05
SNCA-202ENST00000345009 FKBP4Q02790 459 aaKnown RBP eCLIP14.74□□□□□ -0.05
SNCA-202ENST00000345009 VPS33BQ9H267 617 aa14.74□□□□□ -0.05
SNCA-202ENST00000345009 UTRNP46939 3433 aa14.74□□□□□ -0.05
SNCA-202ENST00000345009 ARFGEF1Q9Y6D6 1849 aa14.73□□□□□ -0.05
SNCA-202ENST00000345009 MTX1Q13505 466 aa14.73□□□□□ -0.05
SNCA-202ENST00000345009 C20orf194Q5TEA3 1177 aa14.73□□□□□ -0.05
SNCA-202ENST00000345009 ZBTB40Q9NUA8 1239 aa14.73□□□□□ -0.05
SNCA-202ENST00000345009 XDHP47989 1333 aa14.72□□□□□ -0.05
SNCA-202ENST00000345009 C6orf229H3BNL8 230 aa14.72□□□□□ -0.05
SNCA-202ENST00000345009 AAMPQ13685 434 aa14.72□□□□□ -0.05
SNCA-202ENST00000345009 OLFM4Q6UX06 510 aa14.72□□□□□ -0.05
SNCA-202ENST00000345009 EYA3Q99504 573 aa14.72□□□□□ -0.05
SNCA-202ENST00000345009 PODXL2Q9NZ53 605 aa14.72□□□□□ -0.05
SNCA-202ENST00000345009 GGA1Q9UJY5 639 aa14.72□□□□□ -0.05
SNCA-202ENST00000345009 MINPP1Q9UNW1 487 aa14.72□□□□□ -0.05
SNCA-202ENST00000345009 MROH5Q6ZUA9 1318 aa14.71□□□□□ -0.05
SNCA-202ENST00000345009 NFKBIEO00221 500 aa14.71□□□□□ -0.05
SNCA-202ENST00000345009 HMMRO75330 724 aa14.71□□□□□ -0.05
SNCA-202ENST00000345009 ATP2B4P23634 1241 aa14.71□□□□□ -0.05
SNCA-202ENST00000345009 KCNJ4P48050 445 aa14.71□□□□□ -0.05
SNCA-202ENST00000345009 ATP8B2P98198 1209 aa14.71□□□□□ -0.05
SNCA-202ENST00000345009 RPAP2Q8IXW5 612 aaPredicted RBP14.71□□□□□ -0.05
SNCA-202ENST00000345009 JDP2Q8WYK2 163 aa14.71□□□□□ -0.05
SNCA-202ENST00000345009 ZNF594Q96JF6 807 aaPredicted RBP14.71□□□□□ -0.05
SNCA-202ENST00000345009 RTFDC1Q9BY42 306 aaPredicted RBP14.71□□□□□ -0.05
SNCA-202ENST00000345009 LEMD3Q9Y2U8 911 aa14.71□□□□□ -0.05
SNCA-202ENST00000345009 GPSM2P81274 684 aa14.7□□□□□ -0.06
SNCA-202ENST00000345009 WASHC4Q2M389 1173 aa14.7□□□□□ -0.06
SNCA-202ENST00000345009 C9orf131Q5VYM1 1079 aa14.7□□□□□ -0.06
SNCA-202ENST00000345009 ZC3H12CQ9C0D7 883 aaKnown RBP14.7□□□□□ -0.06
SNCA-202ENST00000345009 COPRSQ9NQ92 184 aa14.7□□□□□ -0.06
SNCA-202ENST00000345009 G3V3G9 751 aa14.69□□□□□ -0.06
SNCA-202ENST00000345009 EYA2O00167 538 aa14.69□□□□□ -0.06
SNCA-202ENST00000345009 CIAO1O76071 339 aa14.69□□□□□ -0.06
SNCA-202ENST00000345009 UFL1O94874 794 aa14.69□□□□□ -0.06
SNCA-202ENST00000345009 RASSF7Q02833 373 aa14.69□□□□□ -0.06
SNCA-202ENST00000345009 PTPN12Q05209 780 aaKnown RBP14.69□□□□□ -0.06
SNCA-202ENST00000345009 CHRNDQ07001 517 aa14.69□□□□□ -0.06
SNCA-202ENST00000345009 G3BP1Q13283 466 aaKnown RBP eCLIP14.69□□□□□ -0.06
SNCA-202ENST00000345009 LARGE2Q8N3Y3 721 aa14.69□□□□□ -0.06
SNCA-202ENST00000345009 TBC1D16Q8TBP0 767 aa14.69□□□□□ -0.06
SNCA-202ENST00000345009 C1orf115Q9H7X2 142 aa14.69□□□□□ -0.06
SNCA-202ENST00000345009 ZNF277Q9NRM2 450 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms