RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 ZC3H12CQ9C0D7 883 aaKnown RBP20.36■□□□□ 0.85
ATG4B-201ENST00000344376 BSDC1Q9NW68 430 aaPredicted RBP20.36■□□□□ 0.85
ATG4B-201ENST00000344376 C9orf78Q9NZ63 289 aaPredicted RBP20.36■□□□□ 0.85
ATG4B-201ENST00000344376 MYH3P11055 1940 aa20.36■□□□□ 0.85
ATG4B-201ENST00000344376 G3V3G9 751 aa20.35■□□□□ 0.85
ATG4B-201ENST00000344376 GRM8O00222 908 aa20.35■□□□□ 0.85
ATG4B-201ENST00000344376 RAD17O75943 681 aa20.35■□□□□ 0.85
ATG4B-201ENST00000344376 ITGA6P23229 1130 aa20.35■□□□□ 0.85
ATG4B-201ENST00000344376 SCNN1DP51172 638 aa20.35■□□□□ 0.85
ATG4B-201ENST00000344376 FAM161AQ3B820 660 aa20.35■□□□□ 0.85
ATG4B-201ENST00000344376 DCAF8Q5TAQ9 597 aa20.35■□□□□ 0.85
ATG4B-201ENST00000344376 TRMT2AQ8IZ69 625 aaKnown RBP20.35■□□□□ 0.85
ATG4B-201ENST00000344376 LTBP1Q14766 1721 aa20.34■□□□□ 0.85
ATG4B-201ENST00000344376 CSF1RP07333 972 aa20.34■□□□□ 0.85
ATG4B-201ENST00000344376 BCL2L13Q9BXK5 485 aa20.34■□□□□ 0.85
ATG4B-201ENST00000344376 DBNDD1Q9H9R9 158 aa20.34■□□□□ 0.85
ATG4B-201ENST00000344376 ATP2B4P23634 1241 aa20.34■□□□□ 0.85
ATG4B-201ENST00000344376 MPHOSPH8Q99549 860 aa20.34■□□□□ 0.85
ATG4B-201ENST00000344376 SMC4Q9NTJ3 1288 aa20.34■□□□□ 0.85
ATG4B-201ENST00000344376 ANKRD18BA2A2Z9 1011 aa20.33■□□□□ 0.84
ATG4B-201ENST00000344376 YDJCA8MPS7 323 aa20.33■□□□□ 0.84
ATG4B-201ENST00000344376 ECE2O60344 883 aa20.33■□□□□ 0.84
ATG4B-201ENST00000344376 GMPSP49915 693 aaPredicted RBP20.33■□□□□ 0.84
ATG4B-201ENST00000344376 GPR101Q96P66 508 aaPredicted RBP20.33■□□□□ 0.84
ATG4B-201ENST00000344376 GPRC5DQ9NZD1 345 aa20.33■□□□□ 0.84
ATG4B-201ENST00000344376 CHMP3Q9Y3E7 222 aa20.33■□□□□ 0.84
ATG4B-201ENST00000344376 CEP350Q5VT06 3117 aa20.32■□□□□ 0.84
ATG4B-201ENST00000344376 EPS15P42566 896 aa20.32■□□□□ 0.84
ATG4B-201ENST00000344376 DOK7Q18PE1 504 aa20.32■□□□□ 0.84
ATG4B-201ENST00000344376 USP50Q70EL3 339 aaPredicted RBP20.32■□□□□ 0.84
ATG4B-201ENST00000344376 MINPP1Q9UNW1 487 aa20.32■□□□□ 0.84
ATG4B-201ENST00000344376 IFIT5Q13325 482 aaKnown RBP20.31■□□□□ 0.84
ATG4B-201ENST00000344376 ADARB2Q9NS39 739 aaKnown RBP20.31■□□□□ 0.84
ATG4B-201ENST00000344376 FOXO4P98177 505 aa20.3■□□□□ 0.84
ATG4B-201ENST00000344376 ANKRD2Q9GZV1 360 aa20.3■□□□□ 0.84
ATG4B-201ENST00000344376 HTRA3P83110 453 aa20.29■□□□□ 0.84
ATG4B-201ENST00000344376 PSMD14O00487 310 aa20.29■□□□□ 0.84
ATG4B-201ENST00000344376 LMBR1LQ6UX01 489 aa20.29■□□□□ 0.84
ATG4B-201ENST00000344376 ADAMTSL1Q8N6G6 1762 aa20.28■□□□□ 0.84
ATG4B-201ENST00000344376 RPS12P25398 132 aaKnown RBP20.28■□□□□ 0.84
ATG4B-201ENST00000344376 CCT4P50991 539 aaKnown RBP20.28■□□□□ 0.84
ATG4B-201ENST00000344376 CCDC57Q2TAC2 916 aa20.28■□□□□ 0.84
ATG4B-201ENST00000344376 TAF7LQ5H9L4 462 aa20.28■□□□□ 0.84
ATG4B-201ENST00000344376 MAP1SQ66K74 1059 aaPredicted RBP20.28■□□□□ 0.84
ATG4B-201ENST00000344376 LEMD3Q9Y2U8 911 aa20.28■□□□□ 0.84
ATG4B-201ENST00000344376 MED23Q9ULK4 1368 aa20.28■□□□□ 0.84
ATG4B-201ENST00000344376 H7C1D1 291 aa20.27■□□□□ 0.84
ATG4B-201ENST00000344376 CNTROBQ8N137 903 aa20.27■□□□□ 0.84
ATG4B-201ENST00000344376 DNAJC5GQ8N7S2 189 aa20.27■□□□□ 0.84
ATG4B-201ENST00000344376 DPF2Q92785 391 aa20.27■□□□□ 0.84
ATG4B-201ENST00000344376 SPEF2Q9C093 1822 aa20.27■□□□□ 0.84
ATG4B-201ENST00000344376 KCNJ4P48050 445 aa20.26■□□□□ 0.83
ATG4B-201ENST00000344376 HNRNPUQ00839 825 aaKnown RBP eCLIP20.26■□□□□ 0.83
ATG4B-201ENST00000344376 KLRG1Q96E93 195 aa20.26■□□□□ 0.83
ATG4B-201ENST00000344376 CREBZFQ9NS37 354 aa20.26■□□□□ 0.83
ATG4B-201ENST00000344376 CNOT7Q9UIV1 285 aaKnown RBP20.26■□□□□ 0.83
ATG4B-201ENST00000344376 PASKQ96RG2 1323 aa20.26■□□□□ 0.83
ATG4B-201ENST00000344376 EPHA10Q5JZY3 1008 aa20.25■□□□□ 0.83
ATG4B-201ENST00000344376 MICALL2Q8IY33 904 aa20.25■□□□□ 0.83
ATG4B-201ENST00000344376 ZBTB12Q9Y330 459 aaPredicted RBP20.25■□□□□ 0.83
ATG4B-201ENST00000344376 UTYO14607 1347 aa20.25■□□□□ 0.83
ATG4B-201ENST00000344376 ITGBL1O95965 494 aaPredicted RBP20.25■□□□□ 0.83
ATG4B-201ENST00000344376 NBPF7P0C2Y1 421 aaPredicted RBP20.25■□□□□ 0.83
ATG4B-201ENST00000344376 CHRNDQ07001 517 aa20.25■□□□□ 0.83
ATG4B-201ENST00000344376 PODNQ7Z5L7 613 aa20.25■□□□□ 0.83
ATG4B-201ENST00000344376 SUCLG2Q96I99 432 aa20.25■□□□□ 0.83
ATG4B-201ENST00000344376 ZNF804BA4D1E1 1349 aa20.25■□□□□ 0.83
ATG4B-201ENST00000344376 API5Q9BZZ5 524 aaKnown RBP20.24■□□□□ 0.83
ATG4B-201ENST00000344376 KCNQ5Q9NR82 932 aa20.24■□□□□ 0.83
ATG4B-201ENST00000344376 VIL1P09327 827 aaKnown RBP20.23■□□□□ 0.83
ATG4B-201ENST00000344376 BRPF1P55201 1214 aaPredicted RBP20.23■□□□□ 0.83
ATG4B-201ENST00000344376 KIF16BQ96L93 1317 aa20.23■□□□□ 0.83
ATG4B-201ENST00000344376 CNNM1Q9NRU3 951 aa20.23■□□□□ 0.83
ATG4B-201ENST00000344376 RARSP54136 660 aaKnown RBP20.22■□□□□ 0.83
ATG4B-201ENST00000344376 LDHAL6AQ6ZMR3 332 aa20.22■□□□□ 0.83
ATG4B-201ENST00000344376 COA1Q9GZY4 146 aa20.22■□□□□ 0.83
ATG4B-201ENST00000344376 NOB1Q9ULX3 412 aaKnown RBP20.22■□□□□ 0.83
ATG4B-201ENST00000344376 TMEM88BA6NKF7 163 aa20.21■□□□□ 0.83
ATG4B-201ENST00000344376 ZC3H15Q8WU90 426 aaKnown RBP20.21■□□□□ 0.83
ATG4B-201ENST00000344376 USP17L3A6NCW0 530 aa20.21■□□□□ 0.83
ATG4B-201ENST00000344376 USP17L4A6NCW7 530 aa20.21■□□□□ 0.83
ATG4B-201ENST00000344376 WTIPA6NIX2 430 aaPredicted RBP20.21■□□□□ 0.83
ATG4B-201ENST00000344376 RSBN1LQ6PCB5 846 aaPredicted RBP20.21■□□□□ 0.83
ATG4B-201ENST00000344376 USP17L1Q7RTZ2 530 aa20.21■□□□□ 0.83
ATG4B-201ENST00000344376 AGBL3Q8NEM8 1001 aa20.21■□□□□ 0.83
ATG4B-201ENST00000344376 TRPM4Q8TD43 1214 aa20.21■□□□□ 0.83
ATG4B-201ENST00000344376 ZNF594Q96JF6 807 aaPredicted RBP20.21■□□□□ 0.83
ATG4B-201ENST00000344376 BICC1Q9H694 974 aaKnown RBP20.21■□□□□ 0.83
ATG4B-201ENST00000344376 KAZALD1Q96I82 304 aa20.2■□□□□ 0.82
ATG4B-201ENST00000344376 ZNF609O15014 1411 aa20.19■□□□□ 0.82
ATG4B-201ENST00000344376 SHTN1A0MZ66 631 aa20.19■□□□□ 0.82
ATG4B-201ENST00000344376 RABL6Q3YEC7 729 aaPredicted RBP20.19■□□□□ 0.82
ATG4B-201ENST00000344376 USP44Q9H0E7 712 aa20.19■□□□□ 0.82
ATG4B-201ENST00000344376 TAF5LO75529 589 aa20.18■□□□□ 0.82
ATG4B-201ENST00000344376 TBC1D10BQ4KMP7 808 aaPredicted RBP20.18■□□□□ 0.82
ATG4B-201ENST00000344376 SAMD7Q7Z3H4 446 aa20.18■□□□□ 0.82
ATG4B-201ENST00000344376 HELBQ8NG08 1087 aaPredicted RBP20.18■□□□□ 0.82
ATG4B-201ENST00000344376 FBXW7Q969H0 707 aa20.18■□□□□ 0.82
ATG4B-201ENST00000344376 PGAP2Q9UHJ9 254 aa20.18■□□□□ 0.82
ATG4B-201ENST00000344376 HIRAP54198 1017 aaPredicted RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms