RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 NUP188Q5SRE5 1749 aa17.67■□□□□ 0.42
VIPAS39-202ENST00000343765 RFX7Q2KHR2 1363 aa17.67■□□□□ 0.42
VIPAS39-202ENST00000343765 PDCP20941 246 aa17.67■□□□□ 0.42
VIPAS39-202ENST00000343765 TCIRG1Q13488 830 aa17.67■□□□□ 0.42
VIPAS39-202ENST00000343765 SYNE4Q8N205 404 aa17.67■□□□□ 0.42
VIPAS39-202ENST00000343765 PIGBQ92521 554 aa17.67■□□□□ 0.42
VIPAS39-202ENST00000343765 CEP126Q9P2H0 1117 aa17.67■□□□□ 0.42
VIPAS39-202ENST00000343765 UBR2Q8IWV8 1755 aa17.67■□□□□ 0.42
VIPAS39-202ENST00000343765 SH3TC1Q8TE82 1336 aa17.67■□□□□ 0.42
VIPAS39-202ENST00000343765 ADORA1P30542 326 aa17.67■□□□□ 0.42
VIPAS39-202ENST00000343765 FOSBP53539 338 aa17.67■□□□□ 0.42
VIPAS39-202ENST00000343765 TAF7LQ5H9L4 462 aa17.67■□□□□ 0.42
VIPAS39-202ENST00000343765 GORABQ5T7V8 394 aa17.67■□□□□ 0.42
VIPAS39-202ENST00000343765 MPNDQ8N594 471 aa17.67■□□□□ 0.42
VIPAS39-202ENST00000343765 TFIP11Q9UBB9 837 aaKnown RBP17.67■□□□□ 0.42
VIPAS39-202ENST00000343765 GPTP24298 496 aa17.66■□□□□ 0.42
VIPAS39-202ENST00000343765 KRT85P78386 507 aa17.66■□□□□ 0.42
VIPAS39-202ENST00000343765 KIF6Q6ZMV9 814 aa17.66■□□□□ 0.42
VIPAS39-202ENST00000343765 TTC6Q86TZ1 520 aa17.66■□□□□ 0.42
VIPAS39-202ENST00000343765 GTF3C6Q969F1 213 aa17.66■□□□□ 0.42
VIPAS39-202ENST00000343765 ISCA1Q9BUE6 129 aa17.66■□□□□ 0.42
VIPAS39-202ENST00000343765 BTG4Q9NY30 223 aa17.66■□□□□ 0.42
VIPAS39-202ENST00000343765 NAP1L2Q9ULW6 460 aaPredicted RBP17.66■□□□□ 0.42
VIPAS39-202ENST00000343765 TNS2Q63HR2 1409 aa17.66■□□□□ 0.42
VIPAS39-202ENST00000343765 ALDH8A1Q9H2A2 487 aaPredicted RBP17.66■□□□□ 0.42
VIPAS39-202ENST00000343765 PPFIA3O75145 1194 aa17.65■□□□□ 0.42
VIPAS39-202ENST00000343765 PTMAP06454 111 aaKnown RBP17.65■□□□□ 0.42
VIPAS39-202ENST00000343765 GPR108Q9NPR9 543 aa17.65■□□□□ 0.42
VIPAS39-202ENST00000343765 PALLDQ8WX93 1383 aa17.65■□□□□ 0.42
VIPAS39-202ENST00000343765 KDM4FA0A1W2PPD8 638 aa17.65■□□□□ 0.42
VIPAS39-202ENST00000343765 HSP90AB3PQ58FF7 597 aa17.65■□□□□ 0.42
VIPAS39-202ENST00000343765 MAST3O60307 1309 aa17.65■□□□□ 0.42
VIPAS39-202ENST00000343765 ZMYM1Q5SVZ6 1142 aa17.64■□□□□ 0.41
VIPAS39-202ENST00000343765 CHST3Q7LGC8 479 aa17.64■□□□□ 0.41
VIPAS39-202ENST00000343765 USP25Q9UHP3 1055 aa17.64■□□□□ 0.41
VIPAS39-202ENST00000343765 TTC39AQ5SRH9 613 aa17.64■□□□□ 0.41
VIPAS39-202ENST00000343765 SYTL4Q96C24 671 aaPredicted RBP17.64■□□□□ 0.41
VIPAS39-202ENST00000343765 HELLSQ9NRZ9 838 aa17.64■□□□□ 0.41
VIPAS39-202ENST00000343765 SHANK3Q9BYB0 1731 aa17.64■□□□□ 0.41
VIPAS39-202ENST00000343765 M0R2C6 588 aa17.63■□□□□ 0.41
VIPAS39-202ENST00000343765 CIAO1O76071 339 aa17.63■□□□□ 0.41
VIPAS39-202ENST00000343765 HSPD1P10809 573 aaKnown RBP17.63■□□□□ 0.41
VIPAS39-202ENST00000343765 ATG3Q9NT62 314 aa17.63■□□□□ 0.41
VIPAS39-202ENST00000343765 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.63■□□□□ 0.41
VIPAS39-202ENST00000343765 NOL7Q9UMY1 257 aaKnown RBP17.63■□□□□ 0.41
VIPAS39-202ENST00000343765 RNF113AO15541 343 aaKnown RBP17.63■□□□□ 0.41
VIPAS39-202ENST00000343765 APOBRQ0VD83 1088 aa17.63■□□□□ 0.41
VIPAS39-202ENST00000343765 SCRN1Q12765 414 aa17.63■□□□□ 0.41
VIPAS39-202ENST00000343765 TTLL5Q6EMB2 1281 aa17.63■□□□□ 0.41
VIPAS39-202ENST00000343765 PAPPAQ13219 1627 aa17.63■□□□□ 0.41
VIPAS39-202ENST00000343765 LETM1O95202 739 aaPredicted RBP17.62■□□□□ 0.41
VIPAS39-202ENST00000343765 PLCB2Q00722 1185 aa17.62■□□□□ 0.41
VIPAS39-202ENST00000343765 HLFQ16534 295 aa17.62■□□□□ 0.41
VIPAS39-202ENST00000343765 HS1BP3Q53T59 392 aa17.62■□□□□ 0.41
VIPAS39-202ENST00000343765 XAGE2Q96GT9 111 aa17.62■□□□□ 0.41
VIPAS39-202ENST00000343765 TOGARAM1Q9Y4F4 1720 aa17.62■□□□□ 0.41
VIPAS39-202ENST00000343765 H3BQV1 296 aa17.62■□□□□ 0.41
VIPAS39-202ENST00000343765 STARD3NLO95772 234 aa17.62■□□□□ 0.41
VIPAS39-202ENST00000343765 CAMK4Q16566 473 aa17.62■□□□□ 0.41
VIPAS39-202ENST00000343765 WASHC4Q2M389 1173 aa17.62■□□□□ 0.41
VIPAS39-202ENST00000343765 CCDC158Q5M9N0 1113 aa17.62■□□□□ 0.41
VIPAS39-202ENST00000343765 IFFO2Q5TF58 517 aa17.62■□□□□ 0.41
VIPAS39-202ENST00000343765 PI16Q6UXB8 463 aa17.62■□□□□ 0.41
VIPAS39-202ENST00000343765 LIG1P18858 919 aa17.62■□□□□ 0.41
VIPAS39-202ENST00000343765 CCT2P78371 535 aaKnown RBP17.62■□□□□ 0.41
VIPAS39-202ENST00000343765 IFIT5Q13325 482 aaKnown RBP17.62■□□□□ 0.41
VIPAS39-202ENST00000343765 SCARF1Q14162 830 aa17.62■□□□□ 0.41
VIPAS39-202ENST00000343765 OSBP2Q969R2 916 aa17.62■□□□□ 0.41
VIPAS39-202ENST00000343765 SPATA32Q96LK8 384 aa17.62■□□□□ 0.41
VIPAS39-202ENST00000343765 DSCC1Q9BVC3 393 aa17.62■□□□□ 0.41
VIPAS39-202ENST00000343765 CCDC39Q9UFE4 941 aa17.62■□□□□ 0.41
VIPAS39-202ENST00000343765 A0A0G2JS52 829 aa17.61■□□□□ 0.41
VIPAS39-202ENST00000343765 DHX32Q7L7V1 743 aaKnown RBP17.61■□□□□ 0.41
VIPAS39-202ENST00000343765 FAM184AQ8NB25 1140 aa17.61■□□□□ 0.41
VIPAS39-202ENST00000343765 ABCA3Q99758 1704 aa17.61■□□□□ 0.41
VIPAS39-202ENST00000343765 GOLGA6L4A6NEF3 574 aa17.61■□□□□ 0.41
VIPAS39-202ENST00000343765 E7EWF7 191 aa17.61■□□□□ 0.41
VIPAS39-202ENST00000343765 PCCAP05165 728 aaPredicted RBP17.6■□□□□ 0.41
VIPAS39-202ENST00000343765 HAND2P61296 217 aa17.6■□□□□ 0.41
VIPAS39-202ENST00000343765 NCOA5Q9HCD5 579 aaKnown RBP17.6■□□□□ 0.41
VIPAS39-202ENST00000343765 ZBTB38Q8NAP3 1195 aaPredicted RBP17.6■□□□□ 0.41
VIPAS39-202ENST00000343765 ZKSCAN5Q9Y2L8 839 aa17.6■□□□□ 0.41
VIPAS39-202ENST00000343765 ZAP70P43403 619 aa17.59■□□□□ 0.41
VIPAS39-202ENST00000343765 CEBPZQ03701 1054 aaKnown RBP17.59■□□□□ 0.41
VIPAS39-202ENST00000343765 STRCQ7RTU9 1775 aa17.59■□□□□ 0.41
VIPAS39-202ENST00000343765 HMGB1P09429 215 aaKnown RBP17.59■□□□□ 0.41
VIPAS39-202ENST00000343765 METTL24Q5JXM2 366 aa17.59■□□□□ 0.41
VIPAS39-202ENST00000343765 AKAP2Q9Y2D5 859 aa17.59■□□□□ 0.41
VIPAS39-202ENST00000343765 MAP3K15Q6ZN16 1313 aa17.59■□□□□ 0.41
VIPAS39-202ENST00000343765 LEO1Q8WVC0 666 aaPredicted RBP17.58■□□□□ 0.41
VIPAS39-202ENST00000343765 TEX13AQ9BXU3 409 aaPredicted RBP17.58■□□□□ 0.41
VIPAS39-202ENST00000343765 GREM2Q9H772 168 aa17.58■□□□□ 0.41
VIPAS39-202ENST00000343765 ADCY5O95622 1261 aa17.58■□□□□ 0.4
VIPAS39-202ENST00000343765 SLC4A9Q96Q91 983 aa17.58■□□□□ 0.4
VIPAS39-202ENST00000343765 FUCA2Q9BTY2 467 aa17.58■□□□□ 0.4
VIPAS39-202ENST00000343765 SCAND2PQ9GZW5 306 aaPredicted RBP17.58■□□□□ 0.4
VIPAS39-202ENST00000343765 ZBTB1Q9Y2K1 713 aa17.58■□□□□ 0.4
VIPAS39-202ENST00000343765 PDIA4P13667 645 aaKnown RBP17.57■□□□□ 0.4
VIPAS39-202ENST00000343765 ITGA6P23229 1130 aa17.57■□□□□ 0.4
VIPAS39-202ENST00000343765 GIGYF2Q6Y7W6 1299 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms