RNA–Protein interactions for RNA: ENST00000343742.6

LRRK2-202, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 5 BASIC

Gene LRRK2, Length 4,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-202ENST00000343742 ZAP70P43403 619 aa14.63□□□□□ -0.07
LRRK2-202ENST00000343742 RUFY3Q7L099 469 aa14.63□□□□□ -0.07
LRRK2-202ENST00000343742 SYNE4Q8N205 404 aa14.63□□□□□ -0.07
LRRK2-202ENST00000343742 NCOA7Q8NI08 942 aa14.63□□□□□ -0.07
LRRK2-202ENST00000343742 SMARCC1Q92922 1105 aaPredicted RBP14.63□□□□□ -0.07
LRRK2-202ENST00000343742 SLC4A4Q9Y6R1 1079 aa14.63□□□□□ -0.07
LRRK2-202ENST00000343742 MED14O60244 1454 aa14.62□□□□□ -0.07
LRRK2-202ENST00000343742 CD163L1Q9NR16 1453 aa14.62□□□□□ -0.07
LRRK2-202ENST00000343742 SYT1P21579 422 aa14.62□□□□□ -0.07
LRRK2-202ENST00000343742 TTF1Q15361 905 aaPredicted RBP14.62□□□□□ -0.07
LRRK2-202ENST00000343742 RASEFQ8IZ41 740 aa14.62□□□□□ -0.07
LRRK2-202ENST00000343742 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.62□□□□□ -0.07
LRRK2-202ENST00000343742 NSFL1CQ9UNZ2 370 aaKnown RBP14.62□□□□□ -0.07
LRRK2-202ENST00000343742 ZC3H13Q5T200 1668 aaKnown RBP14.62□□□□□ -0.07
LRRK2-202ENST00000343742 PTCH1Q13635 1447 aa14.62□□□□□ -0.07
LRRK2-202ENST00000343742 GOLGA8AA7E2F4 631 aa14.62□□□□□ -0.07
LRRK2-202ENST00000343742 XRCC6P12956 609 aaKnown RBP eCLIP14.62□□□□□ -0.07
LRRK2-202ENST00000343742 ZKSCAN3Q9BRR0 538 aa14.62□□□□□ -0.07
LRRK2-202ENST00000343742 NCOA5Q9HCD5 579 aaKnown RBP14.62□□□□□ -0.07
LRRK2-202ENST00000343742 DBNLQ9UJU6 430 aaKnown RBP14.62□□□□□ -0.07
LRRK2-202ENST00000343742 RTCBQ9Y3I0 505 aaKnown RBP14.62□□□□□ -0.07
LRRK2-202ENST00000343742 OVOS2A0A0J9YW53 1432 aa14.62□□□□□ -0.07
LRRK2-202ENST00000343742 OVOS2Q6IE36 1432 aa14.62□□□□□ -0.07
LRRK2-202ENST00000343742 KLHL40Q2TBA0 621 aa14.62□□□□□ -0.07
LRRK2-202ENST00000343742 ZSCAN23Q3MJ62 389 aa14.61□□□□□ -0.07
LRRK2-202ENST00000343742 R3HCC1Q9Y3T6 440 aaKnown RBP14.61□□□□□ -0.07
LRRK2-202ENST00000343742 RAD50Q92878 1312 aa14.61□□□□□ -0.07
LRRK2-202ENST00000343742 SMC2O95347 1197 aa14.61□□□□□ -0.07
LRRK2-202ENST00000343742 GLIPR1L2Q4G1C9 344 aa14.61□□□□□ -0.07
LRRK2-202ENST00000343742 MFSD6Q6ZSS7 791 aa14.61□□□□□ -0.07
LRRK2-202ENST00000343742 CCNL1Q9UK58 526 aaPredicted RBP14.61□□□□□ -0.07
LRRK2-202ENST00000343742 MCM5P33992 734 aa14.61□□□□□ -0.07
LRRK2-202ENST00000343742 ISM2Q6H9L7 571 aa14.61□□□□□ -0.07
LRRK2-202ENST00000343742 CCDC87Q9NVE4 849 aa14.61□□□□□ -0.07
LRRK2-202ENST00000343742 UQCRFS1P1P0C7P4 283 aa14.61□□□□□ -0.07
LRRK2-202ENST00000343742 USP25Q9UHP3 1055 aa14.61□□□□□ -0.07
LRRK2-202ENST00000343742 CDKL5O76039 1030 aa14.6□□□□□ -0.07
LRRK2-202ENST00000343742 CCDC173Q0VFZ6 552 aa14.6□□□□□ -0.07
LRRK2-202ENST00000343742 SLFNL1Q499Z3 407 aa14.6□□□□□ -0.07
LRRK2-202ENST00000343742 PRC1O43663 620 aa14.6□□□□□ -0.07
LRRK2-202ENST00000343742 SASH1O94885 1247 aa14.6□□□□□ -0.07
LRRK2-202ENST00000343742 PPLO60437 1756 aa14.6□□□□□ -0.07
LRRK2-202ENST00000343742 MAP3K11Q16584 847 aa14.6□□□□□ -0.07
LRRK2-202ENST00000343742 SCAND2PQ9GZW5 306 aaPredicted RBP14.6□□□□□ -0.07
LRRK2-202ENST00000343742 GREM2Q9H772 168 aa14.6□□□□□ -0.07
LRRK2-202ENST00000343742 LETM1O95202 739 aaPredicted RBP14.6□□□□□ -0.07
LRRK2-202ENST00000343742 HSPA4P34932 840 aa14.6□□□□□ -0.07
LRRK2-202ENST00000343742 METAP2P50579 478 aaKnown RBP eCLIP14.6□□□□□ -0.07
LRRK2-202ENST00000343742 ADCK5Q3MIX3 580 aa14.6□□□□□ -0.07
LRRK2-202ENST00000343742 TTLL5Q6EMB2 1281 aa14.6□□□□□ -0.07
LRRK2-202ENST00000343742 PI16Q6UXB8 463 aa14.6□□□□□ -0.07
LRRK2-202ENST00000343742 KBTBD3Q8NAB2 608 aa14.6□□□□□ -0.07
LRRK2-202ENST00000343742 SLC26A6Q9BXS9 759 aa14.6□□□□□ -0.07
LRRK2-202ENST00000343742 BIN1O00499 593 aa14.59□□□□□ -0.07
LRRK2-202ENST00000343742 ADORA1P30542 326 aa14.59□□□□□ -0.07
LRRK2-202ENST00000343742 TPTE2Q6XPS3 522 aa14.59□□□□□ -0.07
LRRK2-202ENST00000343742 ZNF622Q969S3 477 aaKnown RBP eCLIP14.59□□□□□ -0.07
LRRK2-202ENST00000343742 KIAA1210Q9ULL0 1709 aa14.59□□□□□ -0.07
LRRK2-202ENST00000343742 PDE8AO60658 829 aa14.59□□□□□ -0.07
LRRK2-202ENST00000343742 USP21Q9UK80 565 aa14.59□□□□□ -0.07
LRRK2-202ENST00000343742 ZFYP08048 801 aaPredicted RBP14.59□□□□□ -0.07
LRRK2-202ENST00000343742 CRB1P82279 1406 aa14.59□□□□□ -0.07
LRRK2-202ENST00000343742 PDILTQ8N807 584 aa14.59□□□□□ -0.07
LRRK2-202ENST00000343742 TFCP2L1Q9NZI6 479 aa14.59□□□□□ -0.07
LRRK2-202ENST00000343742 F13A1P00488 732 aa14.58□□□□□ -0.07
LRRK2-202ENST00000343742 FILIP1Q7Z7B0 1213 aa14.58□□□□□ -0.07
LRRK2-202ENST00000343742 HOOK1Q9UJC3 728 aaKnown RBP14.58□□□□□ -0.07
LRRK2-202ENST00000343742 SNAP23O00161 211 aa14.58□□□□□ -0.08
LRRK2-202ENST00000343742 HMGN5P82970 282 aaKnown RBP14.58□□□□□ -0.08
LRRK2-202ENST00000343742 CDC42BPGQ6DT37 1551 aa14.58□□□□□ -0.08
LRRK2-202ENST00000343742 ESPNB1AK53 854 aa14.58□□□□□ -0.08
LRRK2-202ENST00000343742 MPHOSPH10O00566 681 aaKnown RBP14.58□□□□□ -0.08
LRRK2-202ENST00000343742 MBD4O95243 580 aa14.58□□□□□ -0.08
LRRK2-202ENST00000343742 IARSP41252 1262 aaKnown RBP14.58□□□□□ -0.08
LRRK2-202ENST00000343742 IQCA1Q86XH1 822 aa14.58□□□□□ -0.08
LRRK2-202ENST00000343742 ANO8Q9HCE9 1232 aaPredicted RBP14.58□□□□□ -0.08
LRRK2-202ENST00000343742 LOC102724428A0A0B4J2F2 783 aa14.58□□□□□ -0.08
LRRK2-202ENST00000343742 SIK1P57059 783 aa14.58□□□□□ -0.08
LRRK2-202ENST00000343742 CCDC183Q5T5S1 534 aa14.58□□□□□ -0.08
LRRK2-202ENST00000343742 OTUD7BQ6GQQ9 843 aa14.58□□□□□ -0.08
LRRK2-202ENST00000343742 ANTXR1Q9H6X2 564 aa14.58□□□□□ -0.08
LRRK2-202ENST00000343742 DLC1Q96QB1 1528 aa14.58□□□□□ -0.08
LRRK2-202ENST00000343742 SF3B2Q13435 895 aaKnown RBP14.57□□□□□ -0.08
LRRK2-202ENST00000343742 OLFM4Q6UX06 510 aa14.57□□□□□ -0.08
LRRK2-202ENST00000343742 CCAR2Q8N163 923 aaKnown RBP14.57□□□□□ -0.08
LRRK2-202ENST00000343742 PCMTD1Q96MG8 357 aaPredicted RBP14.57□□□□□ -0.08
LRRK2-202ENST00000343742 NAA16Q6N069 864 aaPredicted RBP14.57□□□□□ -0.08
LRRK2-202ENST00000343742 DHX32Q7L7V1 743 aaKnown RBP14.57□□□□□ -0.08
LRRK2-202ENST00000343742 JMYQ8N9B5 988 aa14.57□□□□□ -0.08
LRRK2-202ENST00000343742 ARMT1Q9H993 441 aa14.57□□□□□ -0.08
LRRK2-202ENST00000343742 CCDC39Q9UFE4 941 aa14.57□□□□□ -0.08
LRRK2-202ENST00000343742 C1orf167Q5SNV9 1468 aa14.57□□□□□ -0.08
LRRK2-202ENST00000343742 GPAA1O43292 621 aa14.57□□□□□ -0.08
LRRK2-202ENST00000343742 PRDM1O75626 825 aa14.57□□□□□ -0.08
LRRK2-202ENST00000343742 SMIM5Q71RC9 77 aa14.57□□□□□ -0.08
LRRK2-202ENST00000343742 NAT10Q9H0A0 1025 aaKnown RBP14.57□□□□□ -0.08
LRRK2-202ENST00000343742 VAT1LQ9HCJ6 419 aa14.57□□□□□ -0.08
LRRK2-202ENST00000343742 STX8Q9UNK0 236 aa14.57□□□□□ -0.08
LRRK2-202ENST00000343742 TSPY2A6NKD2 308 aa14.57□□□□□ -0.08
LRRK2-202ENST00000343742 ATP5JP18859 108 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms