RNA–Protein interactions for RNA: ENST00000343217.6

DUSP28-201, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DUSP28, Length 1,555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-201ENST00000343217 UTP14AQ9BVJ6 771 aaKnown RBP25.73■■□□□ 1.71
DUSP28-201ENST00000343217 LRRCC1Q9C099 1032 aa25.73■■□□□ 1.71
DUSP28-201ENST00000343217 NOP58Q9Y2X3 529 aaKnown RBP25.73■■□□□ 1.71
DUSP28-201ENST00000343217 SURF6O75683 361 aaKnown RBP25.72■■□□□ 1.71
DUSP28-201ENST00000343217 C3orf67Q6ZVT6 689 aa25.72■■□□□ 1.71
DUSP28-201ENST00000343217 CRAMP1Q96RY5 1269 aa25.72■■□□□ 1.71
DUSP28-201ENST00000343217 LAMB2P55268 1798 aa25.71■■□□□ 1.71
DUSP28-201ENST00000343217 ZNF277Q9NRM2 450 aaPredicted RBP25.71■■□□□ 1.71
DUSP28-201ENST00000343217 CDHR2Q9BYE9 1310 aa25.71■■□□□ 1.71
DUSP28-201ENST00000343217 EPHA10Q5JZY3 1008 aa25.7■■□□□ 1.71
DUSP28-201ENST00000343217 CC2D2BQ6DHV5 1058 aa25.7■■□□□ 1.71
DUSP28-201ENST00000343217 DDNO94850 711 aaPredicted RBP25.69■■□□□ 1.7
DUSP28-201ENST00000343217 JARID2Q92833 1246 aaPredicted RBP25.69■■□□□ 1.7
DUSP28-201ENST00000343217 RBM17Q96I25 401 aaKnown RBP25.69■■□□□ 1.7
DUSP28-201ENST00000343217 NLRP3Q96P20 1036 aa25.69■■□□□ 1.7
DUSP28-201ENST00000343217 PSMD1Q99460 953 aa25.69■■□□□ 1.7
DUSP28-201ENST00000343217 PLA2G12BQ9BX93 195 aa25.69■■□□□ 1.7
DUSP28-201ENST00000343217 SYNE4Q8N205 404 aa25.69■■□□□ 1.7
DUSP28-201ENST00000343217 DNAJC5GQ8N7S2 189 aa25.69■■□□□ 1.7
DUSP28-201ENST00000343217 TSHZ2Q9NRE2 1034 aa25.69■■□□□ 1.7
DUSP28-201ENST00000343217 FOXO4P98177 505 aa25.68■■□□□ 1.7
DUSP28-201ENST00000343217 ERC1Q8IUD2 1116 aa25.68■■□□□ 1.7
DUSP28-201ENST00000343217 KIF1BPQ96EK5 621 aa25.68■■□□□ 1.7
DUSP28-201ENST00000343217 SCN4AP35499 1836 aa25.68■■□□□ 1.7
DUSP28-201ENST00000343217 APBB1O00213 710 aa25.67■■□□□ 1.7
DUSP28-201ENST00000343217 TRMT112Q9UI30 125 aaKnown RBP25.67■■□□□ 1.7
DUSP28-201ENST00000343217 IARSP41252 1262 aaKnown RBP25.66■■□□□ 1.7
DUSP28-201ENST00000343217 FAM161AQ3B820 660 aa25.66■■□□□ 1.7
DUSP28-201ENST00000343217 GRIPAP1Q4V328 841 aa25.65■■□□□ 1.7
DUSP28-201ENST00000343217 RTL5Q5HYW3 569 aaPredicted RBP25.65■■□□□ 1.7
DUSP28-201ENST00000343217 LMBR1LQ6UX01 489 aa25.65■■□□□ 1.7
DUSP28-201ENST00000343217 FAM89AQ96GI7 184 aa25.65■■□□□ 1.7
DUSP28-201ENST00000343217 L3MBTL3Q96JM7 780 aaPredicted RBP25.65■■□□□ 1.7
DUSP28-201ENST00000343217 COPRSQ9NQ92 184 aa25.65■■□□□ 1.7
DUSP28-201ENST00000343217 HSP90B1P14625 803 aaKnown RBP25.65■■□□□ 1.7
DUSP28-201ENST00000343217 OS9Q13438 667 aaPredicted RBP25.65■■□□□ 1.7
DUSP28-201ENST00000343217 RHPN1Q8TCX5 695 aa25.65■■□□□ 1.7
DUSP28-201ENST00000343217 PPEF1O14829 653 aaPredicted RBP25.64■■□□□ 1.69
DUSP28-201ENST00000343217 SMARCA5O60264 1052 aaPredicted RBP25.64■■□□□ 1.69
DUSP28-201ENST00000343217 G3BP1Q13283 466 aaKnown RBP eCLIP25.64■■□□□ 1.69
DUSP28-201ENST00000343217 ZNF541Q9H0D2 1346 aa25.64■■□□□ 1.69
DUSP28-201ENST00000343217 DDX60Q8IY21 1712 aaKnown RBP25.63■■□□□ 1.69
DUSP28-201ENST00000343217 FZD9O00144 591 aa25.63■■□□□ 1.69
DUSP28-201ENST00000343217 SLC51AQ86UW1 340 aa25.63■■□□□ 1.69
DUSP28-201ENST00000343217 PLEKHM2Q8IWE5 1019 aa25.63■■□□□ 1.69
DUSP28-201ENST00000343217 BACH2Q9BYV9 841 aa25.63■■□□□ 1.69
DUSP28-201ENST00000343217 SH3TC1Q8TE82 1336 aa25.63■■□□□ 1.69
DUSP28-201ENST00000343217 MYH3P11055 1940 aa25.62■■□□□ 1.69
DUSP28-201ENST00000343217 RFX5P48382 616 aaPredicted RBP25.62■■□□□ 1.69
DUSP28-201ENST00000343217 HTRA3P83110 453 aa25.62■■□□□ 1.69
DUSP28-201ENST00000343217 COL4A5P29400 1685 aa25.62■■□□□ 1.69
DUSP28-201ENST00000343217 IRS4O14654 1257 aaPredicted RBP25.61■■□□□ 1.69
DUSP28-201ENST00000343217 HCLS1P14317 486 aaPredicted RBP25.61■■□□□ 1.69
DUSP28-201ENST00000343217 PA2G4Q9UQ80 394 aaKnown RBP25.61■■□□□ 1.69
DUSP28-201ENST00000343217 PTPN12Q05209 780 aaKnown RBP25.61■■□□□ 1.69
DUSP28-201ENST00000343217 BMP2KLQ5H9B9 411 aa25.61■■□□□ 1.69
DUSP28-201ENST00000343217 CHMP3Q9Y3E7 222 aa25.61■■□□□ 1.69
DUSP28-201ENST00000343217 IQCA1LA6NCM1 817 aa25.6■■□□□ 1.69
DUSP28-201ENST00000343217 PDE8AO60658 829 aa25.6■■□□□ 1.69
DUSP28-201ENST00000343217 CSF1RP07333 972 aa25.6■■□□□ 1.69
DUSP28-201ENST00000343217 ATP6V0A2Q9Y487 856 aa25.6■■□□□ 1.69
DUSP28-201ENST00000343217 TAF1P21675 1872 aa25.59■■□□□ 1.69
DUSP28-201ENST00000343217 OSBPL3Q9H4L5 887 aa25.59■■□□□ 1.69
DUSP28-201ENST00000343217 C8orf34Q49A92 452 aa25.58■■□□□ 1.69
DUSP28-201ENST00000343217 JDP2Q8WYK2 163 aa25.58■■□□□ 1.69
DUSP28-201ENST00000343217 POTEIP0CG38 1075 aa25.57■■□□□ 1.68
DUSP28-201ENST00000343217 POTEJP0CG39 1038 aa25.57■■□□□ 1.68
DUSP28-201ENST00000343217 CLASRPQ8N2M8 674 aaKnown RBP25.57■■□□□ 1.68
DUSP28-201ENST00000343217 TAF1DQ9H5J8 278 aaPredicted RBP25.57■■□□□ 1.68
DUSP28-201ENST00000343217 FBXO3Q9UK99 471 aa25.57■■□□□ 1.68
DUSP28-201ENST00000343217 SALL3Q9BXA9 1300 aa25.57■■□□□ 1.68
DUSP28-201ENST00000343217 BBOX1O75936 387 aa25.56■■□□□ 1.68
DUSP28-201ENST00000343217 CTSWP56202 376 aa25.56■■□□□ 1.68
DUSP28-201ENST00000343217 CCDC57Q2TAC2 916 aa25.56■■□□□ 1.68
DUSP28-201ENST00000343217 KLRG1Q96E93 195 aa25.56■■□□□ 1.68
DUSP28-201ENST00000343217 IL1RAPL2Q9NP60 686 aa25.56■■□□□ 1.68
DUSP28-201ENST00000343217 CHADLQ6NUI6 762 aa25.56■■□□□ 1.68
DUSP28-201ENST00000343217 MX1P20591 662 aa25.55■■□□□ 1.68
DUSP28-201ENST00000343217 PDE1AP54750 535 aa25.55■■□□□ 1.68
DUSP28-201ENST00000343217 DDX46Q7L014 1031 aaKnown RBP25.55■■□□□ 1.68
DUSP28-201ENST00000343217 SP8Q8IXZ3 490 aa25.55■■□□□ 1.68
DUSP28-201ENST00000343217 GPC2Q8N158 579 aa25.55■■□□□ 1.68
DUSP28-201ENST00000343217 TTLL11Q8NHH1 800 aa25.55■■□□□ 1.68
DUSP28-201ENST00000343217 KLHDC4Q8TBB5 520 aa25.55■■□□□ 1.68
DUSP28-201ENST00000343217 OTUD7AQ8TE49 926 aaPredicted RBP25.55■■□□□ 1.68
DUSP28-201ENST00000343217 BCL11AQ9H165 835 aa25.55■■□□□ 1.68
DUSP28-201ENST00000343217 SIL1Q9H173 461 aa25.55■■□□□ 1.68
DUSP28-201ENST00000343217 ADAMTSL1Q8N6G6 1762 aa25.54■■□□□ 1.68
DUSP28-201ENST00000343217 AOX1Q06278 1338 aa25.54■■□□□ 1.68
DUSP28-201ENST00000343217 SASH1O94885 1247 aa25.54■■□□□ 1.68
DUSP28-201ENST00000343217 IFIT5Q13325 482 aaKnown RBP25.54■■□□□ 1.68
DUSP28-201ENST00000343217 GRAPQ13588 217 aa25.54■■□□□ 1.68
DUSP28-201ENST00000343217 TTC22Q5TAA0 569 aa25.54■■□□□ 1.68
DUSP28-201ENST00000343217 LARGE2Q8N3Y3 721 aa25.54■■□□□ 1.68
DUSP28-201ENST00000343217 GRAPLQ8TC17 118 aaPredicted RBP25.54■■□□□ 1.68
DUSP28-201ENST00000343217 RTFDC1Q9BY42 306 aaPredicted RBP25.54■■□□□ 1.68
DUSP28-201ENST00000343217 TMX4Q9H1E5 349 aaPredicted RBP25.54■■□□□ 1.68
DUSP28-201ENST00000343217 STAP2Q9UGK3 403 aa25.54■■□□□ 1.68
DUSP28-201ENST00000343217 LRRC37AA6NMS7 1700 aa25.54■■□□□ 1.68
DUSP28-201ENST00000343217 VPS33BQ9H267 617 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms