RNA–Protein interactions for RNA: ENST00000342665.4

SOX12-201, Transcript of SRY-box 12, humanhuman

APPRIS P1 BASIC

Gene SOX12, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX12-201ENST00000342665 CYP7A1P22680 504 aa23.17■■□□□ 1.3
SOX12-201ENST00000342665 CASQ1P31415 396 aa23.17■■□□□ 1.3
SOX12-201ENST00000342665 NGLY1Q96IV0 654 aa23.17■■□□□ 1.3
SOX12-201ENST00000342665 RPGRQ92834 1020 aaKnown RBP23.16■■□□□ 1.3
SOX12-201ENST00000342665 LGR6Q9HBX8 967 aa23.16■■□□□ 1.3
SOX12-201ENST00000342665 ERVK-7P63135 1459 aa23.16■■□□□ 1.3
SOX12-201ENST00000342665 RTN1Q16799 776 aa23.16■■□□□ 1.3
SOX12-201ENST00000342665 AEBP2Q6ZN18 517 aaPredicted RBP23.16■■□□□ 1.3
SOX12-201ENST00000342665 ZNF830Q96NB3 372 aaPredicted RBP23.16■■□□□ 1.3
SOX12-201ENST00000342665 CRNKL1Q9BZJ0 848 aaKnown RBP23.16■■□□□ 1.3
SOX12-201ENST00000342665 DNAJC25Q9H1X3 360 aa23.16■■□□□ 1.3
SOX12-201ENST00000342665 KAT14Q9H8E8 782 aa23.16■■□□□ 1.3
SOX12-201ENST00000342665 NEO1Q92859 1461 aa23.16■■□□□ 1.3
SOX12-201ENST00000342665 SNW1Q13573 536 aaKnown RBP23.15■■□□□ 1.3
SOX12-201ENST00000342665 CGNQ9P2M7 1197 aaKnown RBP23.15■■□□□ 1.3
SOX12-201ENST00000342665 CPA1P15085 419 aa23.15■■□□□ 1.3
SOX12-201ENST00000342665 PAXBP1Q9Y5B6 917 aa23.15■■□□□ 1.3
SOX12-201ENST00000342665 YEATS4O95619 227 aa23.15■■□□□ 1.3
SOX12-201ENST00000342665 ANKRD18AQ8IVF6 992 aa23.15■■□□□ 1.3
SOX12-201ENST00000342665 NUP88Q99567 741 aaPredicted RBP23.15■■□□□ 1.3
SOX12-201ENST00000342665 METTL22Q9BUU2 404 aaPredicted RBP23.15■■□□□ 1.3
SOX12-201ENST00000342665 SLC4A4Q9Y6R1 1079 aa23.15■■□□□ 1.3
SOX12-201ENST00000342665 SPTLC2O15270 562 aa23.15■■□□□ 1.3
SOX12-201ENST00000342665 NBPF7P0C2Y1 421 aaPredicted RBP23.15■■□□□ 1.3
SOX12-201ENST00000342665 TSG101Q99816 390 aa23.15■■□□□ 1.3
SOX12-201ENST00000342665 TAF4BQ92750 862 aa23.14■■□□□ 1.3
SOX12-201ENST00000342665 APOBRQ0VD83 1088 aa23.14■■□□□ 1.29
SOX12-201ENST00000342665 SKIDA1Q1XH10 827 aa23.14■■□□□ 1.29
SOX12-201ENST00000342665 CCDC102AQ96A19 550 aa23.14■■□□□ 1.29
SOX12-201ENST00000342665 PTPDC1A2A3K4 754 aa23.13■■□□□ 1.29
SOX12-201ENST00000342665 PPP1R12BO60237 982 aaPredicted RBP23.13■■□□□ 1.29
SOX12-201ENST00000342665 TTC12Q9H892 705 aaPredicted RBP23.13■■□□□ 1.29
SOX12-201ENST00000342665 CACNA2D4Q7Z3S7 1137 aa23.13■■□□□ 1.29
SOX12-201ENST00000342665 PLEKHF1Q96S99 279 aa23.13■■□□□ 1.29
SOX12-201ENST00000342665 PRM3Q9NNZ6 103 aa23.13■■□□□ 1.29
SOX12-201ENST00000342665 ARHGEF10O15013 1369 aa23.13■■□□□ 1.29
SOX12-201ENST00000342665 PATL2C9JE40 543 aaKnown RBP23.13■■□□□ 1.29
SOX12-201ENST00000342665 KIF20AO95235 890 aa23.13■■□□□ 1.29
SOX12-201ENST00000342665 SKILP12757 684 aa23.13■■□□□ 1.29
SOX12-201ENST00000342665 UBASH3AP57075 661 aa23.13■■□□□ 1.29
SOX12-201ENST00000342665 SNX14Q9Y5W7 946 aa23.13■■□□□ 1.29
SOX12-201ENST00000342665 KAT6BQ8WYB5 2073 aa23.13■■□□□ 1.29
SOX12-201ENST00000342665 AMPD3Q01432 767 aa23.12■■□□□ 1.29
SOX12-201ENST00000342665 CCDC96Q2M329 555 aa23.12■■□□□ 1.29
SOX12-201ENST00000342665 PLBD2Q8NHP8 589 aa23.12■■□□□ 1.29
SOX12-201ENST00000342665 C6orf229H3BNL8 230 aa23.12■■□□□ 1.29
SOX12-201ENST00000342665 TMEM132AQ24JP5 1023 aa23.12■■□□□ 1.29
SOX12-201ENST00000342665 TMEM2Q9UHN6 1383 aa23.12■■□□□ 1.29
SOX12-201ENST00000342665 SAMD9LQ8IVG5 1584 aa23.12■■□□□ 1.29
SOX12-201ENST00000342665 HELLSQ9NRZ9 838 aa23.12■■□□□ 1.29
SOX12-201ENST00000342665 CEP135Q66GS9 1140 aa23.11■■□□□ 1.29
SOX12-201ENST00000342665 CHST3Q7LGC8 479 aa23.11■■□□□ 1.29
SOX12-201ENST00000342665 EYA2O00167 538 aa23.11■■□□□ 1.29
SOX12-201ENST00000342665 MARCKSP29966 332 aaPredicted RBP23.11■■□□□ 1.29
SOX12-201ENST00000342665 ATL3Q6DD88 541 aa23.11■■□□□ 1.29
SOX12-201ENST00000342665 IQSEC3Q9UPP2 1182 aaPredicted RBP23.11■■□□□ 1.29
SOX12-201ENST00000342665 TIMM10P62072 90 aa23.1■■□□□ 1.29
SOX12-201ENST00000342665 CRACR2AQ9BSW2 395 aa23.1■■□□□ 1.29
SOX12-201ENST00000342665 MYO5CQ9NQX4 1742 aa23.1■■□□□ 1.29
SOX12-201ENST00000342665 IRS4O14654 1257 aaPredicted RBP23.1■■□□□ 1.29
SOX12-201ENST00000342665 EIF4A1P60842 406 aaKnown RBP23.1■■□□□ 1.29
SOX12-201ENST00000342665 NBPF6Q5VWK0 638 aa23.1■■□□□ 1.29
SOX12-201ENST00000342665 NBPF5PQ86XG9 351 aaPredicted RBP23.1■■□□□ 1.29
SOX12-201ENST00000342665 CALML4Q96GE6 196 aa23.1■■□□□ 1.29
SOX12-201ENST00000342665 NBPF4Q96M43 638 aa23.1■■□□□ 1.29
SOX12-201ENST00000342665 CBX1P83916 185 aa23.1■■□□□ 1.29
SOX12-201ENST00000342665 TNNI3KQ59H18 835 aa23.1■■□□□ 1.29
SOX12-201ENST00000342665 IFIT1BQ5T764 474 aaKnown RBP23.1■■□□□ 1.29
SOX12-201ENST00000342665 JAKMIP3Q5VZ66 844 aa23.1■■□□□ 1.29
SOX12-201ENST00000342665 DZIP3Q86Y13 1208 aaKnown RBP23.1■■□□□ 1.29
SOX12-201ENST00000342665 STX8Q9UNK0 236 aa23.1■■□□□ 1.29
SOX12-201ENST00000342665 FPGT-TNNI3KV9GXZ4 949 aa23.1■■□□□ 1.29
SOX12-201ENST00000342665 RPS6KB1P23443 525 aa23.1■■□□□ 1.29
SOX12-201ENST00000342665 TSPYL1Q9H0U9 437 aa23.1■■□□□ 1.29
SOX12-201ENST00000342665 USO1O60763 962 aaKnown RBP23.09■■□□□ 1.29
SOX12-201ENST00000342665 GNAT2P19087 354 aa23.09■■□□□ 1.29
SOX12-201ENST00000342665 MTIF2P46199 727 aaKnown RBP23.09■■□□□ 1.29
SOX12-201ENST00000342665 BRAPQ7Z569 592 aa23.09■■□□□ 1.29
SOX12-201ENST00000342665 AOPEPQ8N6M6 819 aa23.09■■□□□ 1.29
SOX12-201ENST00000342665 NAA16Q6N069 864 aaPredicted RBP23.09■■□□□ 1.29
SOX12-201ENST00000342665 NIP7Q9Y221 180 aaKnown RBP eCLIP23.09■■□□□ 1.29
SOX12-201ENST00000342665 RTL1A6NKG5 1358 aa23.09■■□□□ 1.29
SOX12-201ENST00000342665 ATP6V1AP38606 617 aa23.09■■□□□ 1.29
SOX12-201ENST00000342665 NLRP3Q96P20 1036 aa23.09■■□□□ 1.29
SOX12-201ENST00000342665 DBNDD2Q9BQY9 259 aa23.09■■□□□ 1.29
SOX12-201ENST00000342665 SEPT11Q9NVA2 429 aaKnown RBP23.09■■□□□ 1.29
SOX12-201ENST00000342665 SLC27A2O14975 620 aa23.09■■□□□ 1.29
SOX12-201ENST00000342665 IDEP14735 1019 aa23.09■■□□□ 1.29
SOX12-201ENST00000342665 SMARCC1Q92922 1105 aaPredicted RBP23.09■■□□□ 1.29
SOX12-201ENST00000342665 ORAI2Q96SN7 254 aa23.09■■□□□ 1.29
SOX12-201ENST00000342665 UTP14AQ9BVJ6 771 aaKnown RBP23.09■■□□□ 1.29
SOX12-201ENST00000342665 PCDH11XQ9BZA7 1347 aa23.08■■□□□ 1.29
SOX12-201ENST00000342665 PCDH11YQ9BZA8 1340 aa23.08■■□□□ 1.29
SOX12-201ENST00000342665 N4BP3O15049 544 aa23.08■■□□□ 1.29
SOX12-201ENST00000342665 USP44Q9H0E7 712 aa23.08■■□□□ 1.29
SOX12-201ENST00000342665 MYOM2P54296 1465 aa23.08■■□□□ 1.29
SOX12-201ENST00000342665 PRKCSHP14314 528 aaPredicted RBP23.08■■□□□ 1.29
SOX12-201ENST00000342665 MAP9Q49MG5 647 aa23.08■■□□□ 1.28
SOX12-201ENST00000342665 GNAQP50148 359 aa23.07■■□□□ 1.28
SOX12-201ENST00000342665 HSPA4P34932 840 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms