RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 TBC1D16Q8TBP0 767 aa16.81■□□□□ 0.28
NECTIN1-203ENST00000341398 METTL22Q9BUU2 404 aaPredicted RBP16.81■□□□□ 0.28
NECTIN1-203ENST00000341398 STK31Q9BXU1 1019 aa16.81■□□□□ 0.28
NECTIN1-203ENST00000341398 ZNF408Q9H9D4 720 aa16.81■□□□□ 0.28
NECTIN1-203ENST00000341398 PODXL2Q9NZ53 605 aa16.81■□□□□ 0.28
NECTIN1-203ENST00000341398 POLR2AP24928 1970 aaKnown RBP16.81■□□□□ 0.28
NECTIN1-203ENST00000341398 HSPA8P11142 646 aaKnown RBP16.8■□□□□ 0.28
NECTIN1-203ENST00000341398 NEXNQ0ZGT2 675 aa16.8■□□□□ 0.28
NECTIN1-203ENST00000341398 DOK7Q18PE1 504 aa16.8■□□□□ 0.28
NECTIN1-203ENST00000341398 TRPM4Q8TD43 1214 aa16.8■□□□□ 0.28
NECTIN1-203ENST00000341398 GGA1Q9UJY5 639 aa16.8■□□□□ 0.28
NECTIN1-203ENST00000341398 ZBTB12Q9Y330 459 aaPredicted RBP16.8■□□□□ 0.28
NECTIN1-203ENST00000341398 DUOX1Q9NRD9 1551 aa16.8■□□□□ 0.28
NECTIN1-203ENST00000341398 DCPSQ96C86 337 aaKnown RBP16.79■□□□□ 0.28
NECTIN1-203ENST00000341398 SEC31BQ9NQW1 1179 aa16.79■□□□□ 0.28
NECTIN1-203ENST00000341398 UFL1O94874 794 aa16.78■□□□□ 0.28
NECTIN1-203ENST00000341398 KSR2Q6VAB6 950 aa16.78■□□□□ 0.28
NECTIN1-203ENST00000341398 SAMD7Q7Z3H4 446 aa16.78■□□□□ 0.28
NECTIN1-203ENST00000341398 USP48Q86UV5 1035 aa16.78■□□□□ 0.28
NECTIN1-203ENST00000341398 ANKRD18AQ8IVF6 992 aa16.78■□□□□ 0.28
NECTIN1-203ENST00000341398 MAP3K2Q9Y2U5 619 aa16.78■□□□□ 0.28
NECTIN1-203ENST00000341398 CA12O43570 354 aa16.77■□□□□ 0.28
NECTIN1-203ENST00000341398 TBC1D10BQ4KMP7 808 aaPredicted RBP16.77■□□□□ 0.28
NECTIN1-203ENST00000341398 RBM26Q5T8P6 1007 aaKnown RBP16.77■□□□□ 0.28
NECTIN1-203ENST00000341398 CDC5LQ99459 802 aaKnown RBP16.77■□□□□ 0.28
NECTIN1-203ENST00000341398 VIL1P09327 827 aaKnown RBP16.77■□□□□ 0.27
NECTIN1-203ENST00000341398 CCDC27Q2M243 656 aa16.77■□□□□ 0.27
NECTIN1-203ENST00000341398 KRT26Q7Z3Y9 468 aa16.77■□□□□ 0.27
NECTIN1-203ENST00000341398 XDHP47989 1333 aa16.76■□□□□ 0.27
NECTIN1-203ENST00000341398 SHTN1A0MZ66 631 aa16.76■□□□□ 0.27
NECTIN1-203ENST00000341398 PI4KAP2A4QPH2 592 aa16.76■□□□□ 0.27
NECTIN1-203ENST00000341398 AOC2O75106 756 aa16.76■□□□□ 0.27
NECTIN1-203ENST00000341398 ATP2B4P23634 1241 aa16.76■□□□□ 0.27
NECTIN1-203ENST00000341398 PI4KAP1Q8N8J0 262 aa16.76■□□□□ 0.27
NECTIN1-203ENST00000341398 C2orf69Q8N8R5 385 aa16.76■□□□□ 0.27
NECTIN1-203ENST00000341398 CCDC85AQ96PX6 553 aaPredicted RBP16.76■□□□□ 0.27
NECTIN1-203ENST00000341398 KCNQ5Q9NR82 932 aa16.76■□□□□ 0.27
NECTIN1-203ENST00000341398 MYH3P11055 1940 aa16.75■□□□□ 0.27
NECTIN1-203ENST00000341398 HUNKP57058 714 aa16.75■□□□□ 0.27
NECTIN1-203ENST00000341398 NOGQ13253 232 aa16.75■□□□□ 0.27
NECTIN1-203ENST00000341398 TSPYL6Q8N831 410 aa16.75■□□□□ 0.27
NECTIN1-203ENST00000341398 AGBL3Q8NEM8 1001 aa16.75■□□□□ 0.27
NECTIN1-203ENST00000341398 JARID2Q92833 1246 aaPredicted RBP16.75■□□□□ 0.27
NECTIN1-203ENST00000341398 CACNA1FO60840 1977 aa16.74■□□□□ 0.27
NECTIN1-203ENST00000341398 THSD7BQ9C0I4 1608 aa16.74■□□□□ 0.27
NECTIN1-203ENST00000341398 BRPF1P55201 1214 aaPredicted RBP16.74■□□□□ 0.27
NECTIN1-203ENST00000341398 KIF4BQ2VIQ3 1234 aa16.74■□□□□ 0.27
NECTIN1-203ENST00000341398 TWISTNBQ3B726 338 aaPredicted RBP16.74■□□□□ 0.27
NECTIN1-203ENST00000341398 SULF1Q8IWU6 871 aa16.74■□□□□ 0.27
NECTIN1-203ENST00000341398 TSR2Q969E8 191 aaKnown RBP16.74■□□□□ 0.27
NECTIN1-203ENST00000341398 RTL9Q8NET4 1388 aa16.73■□□□□ 0.27
NECTIN1-203ENST00000341398 SLC4A2P04920 1241 aa16.73■□□□□ 0.27
NECTIN1-203ENST00000341398 CTSWP56202 376 aa16.73■□□□□ 0.27
NECTIN1-203ENST00000341398 NCBP3Q53F19 620 aaKnown RBP16.73■□□□□ 0.27
NECTIN1-203ENST00000341398 PODNQ7Z5L7 613 aa16.73■□□□□ 0.27
NECTIN1-203ENST00000341398 WWC1Q8IX03 1113 aa16.73■□□□□ 0.27
NECTIN1-203ENST00000341398 GBA2Q9HCG7 927 aaPredicted RBP16.73■□□□□ 0.27
NECTIN1-203ENST00000341398 IL16Q14005 1332 aa16.72■□□□□ 0.27
NECTIN1-203ENST00000341398 SCN9AQ15858 1988 aa16.72■□□□□ 0.27
NECTIN1-203ENST00000341398 FAM161AQ3B820 660 aa16.72■□□□□ 0.27
NECTIN1-203ENST00000341398 RSBN1LQ6PCB5 846 aaPredicted RBP16.72■□□□□ 0.27
NECTIN1-203ENST00000341398 TTLL11Q8NHH1 800 aa16.72■□□□□ 0.27
NECTIN1-203ENST00000341398 CCDC102AQ96A19 550 aa16.72■□□□□ 0.27
NECTIN1-203ENST00000341398 BSDC1Q9NW68 430 aaPredicted RBP16.72■□□□□ 0.27
NECTIN1-203ENST00000341398 USP17L3A6NCW0 530 aa16.71■□□□□ 0.27
NECTIN1-203ENST00000341398 USP17L4A6NCW7 530 aa16.71■□□□□ 0.27
NECTIN1-203ENST00000341398 IGKV5-2P06315 115 aa16.71■□□□□ 0.27
NECTIN1-203ENST00000341398 RGMBQ6NW40 437 aa16.71■□□□□ 0.27
NECTIN1-203ENST00000341398 USP17L1Q7RTZ2 530 aa16.71■□□□□ 0.27
NECTIN1-203ENST00000341398 ABHD8Q96I13 439 aa16.71■□□□□ 0.27
NECTIN1-203ENST00000341398 PCDH10Q9P2E7 1040 aa16.71■□□□□ 0.27
NECTIN1-203ENST00000341398 COL4A1P02462 1669 aa16.71■□□□□ 0.27
NECTIN1-203ENST00000341398 PSME4Q14997 1843 aa16.7■□□□□ 0.26
NECTIN1-203ENST00000341398 NEURL1BA8MQ27 555 aa16.7■□□□□ 0.26
NECTIN1-203ENST00000341398 EGFRP00533 1210 aa16.7■□□□□ 0.26
NECTIN1-203ENST00000341398 USP17L8P0C7I0 530 aa16.7■□□□□ 0.26
NECTIN1-203ENST00000341398 IGHMBP2P38935 993 aaKnown RBP16.7■□□□□ 0.26
NECTIN1-203ENST00000341398 MYH16Q9H6N6 1097 aa16.7■□□□□ 0.26
NECTIN1-203ENST00000341398 ZNF280AP59817 542 aaPredicted RBP16.69■□□□□ 0.26
NECTIN1-203ENST00000341398 SCARF1Q14162 830 aa16.69■□□□□ 0.26
NECTIN1-203ENST00000341398 CWF19L2Q2TBE0 894 aaKnown RBP16.69■□□□□ 0.26
NECTIN1-203ENST00000341398 GREM2Q9H772 168 aa16.69■□□□□ 0.26
NECTIN1-203ENST00000341398 GGA3Q9NZ52 723 aa16.69■□□□□ 0.26
NECTIN1-203ENST00000341398 MINPP1Q9UNW1 487 aa16.69■□□□□ 0.26
NECTIN1-203ENST00000341398 CASP8AP2Q9UKL3 1982 aa16.69■□□□□ 0.26
NECTIN1-203ENST00000341398 ADM5C9JUS6 153 aa16.68■□□□□ 0.26
NECTIN1-203ENST00000341398 H7C1W4 665 aa16.68■□□□□ 0.26
NECTIN1-203ENST00000341398 ANP32CO43423 234 aa16.68■□□□□ 0.26
NECTIN1-203ENST00000341398 CCT4P50991 539 aaKnown RBP16.68■□□□□ 0.26
NECTIN1-203ENST00000341398 ZNF157P51786 506 aaPredicted RBP16.68■□□□□ 0.26
NECTIN1-203ENST00000341398 UBE3BQ7Z3V4 1068 aa16.68■□□□□ 0.26
NECTIN1-203ENST00000341398 OGFOD1Q8N543 542 aa16.68■□□□□ 0.26
NECTIN1-203ENST00000341398 MRS2Q9HD23 443 aa16.68■□□□□ 0.26
NECTIN1-203ENST00000341398 TSKSQ9UJT2 592 aa16.68■□□□□ 0.26
NECTIN1-203ENST00000341398 LEMD3Q9Y2U8 911 aa16.68■□□□□ 0.26
NECTIN1-203ENST00000341398 ZNF609O15014 1411 aa16.68■□□□□ 0.26
NECTIN1-203ENST00000341398 ZEB1P37275 1124 aaPredicted RBP16.67■□□□□ 0.26
NECTIN1-203ENST00000341398 MMP14P50281 582 aa16.67■□□□□ 0.26
NECTIN1-203ENST00000341398 FLIIQ13045 1269 aa16.67■□□□□ 0.26
NECTIN1-203ENST00000341398 FKBP5Q13451 457 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms