RNA–Protein interactions for RNA: ENST00000341062.6

TRIM60-201, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM60, Length 1,867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-201ENST00000341062 UBE3BQ7Z3V4 1068 aa16.17■□□□□ 0.18
TRIM60-201ENST00000341062 AACSQ86V21 672 aa16.17■□□□□ 0.18
TRIM60-201ENST00000341062 DDX60Q8IY21 1712 aaKnown RBP16.17■□□□□ 0.18
TRIM60-201ENST00000341062 COL4A1P02462 1669 aa16.17■□□□□ 0.18
TRIM60-201ENST00000341062 GRPEL1Q9HAV7 217 aa16.16■□□□□ 0.18
TRIM60-201ENST00000341062 DIAPH3Q9NSV4 1193 aa16.16■□□□□ 0.18
TRIM60-201ENST00000341062 CWC25Q9NXE8 425 aaPredicted RBP16.16■□□□□ 0.18
TRIM60-201ENST00000341062 HIP1O00291 1037 aa16.16■□□□□ 0.18
TRIM60-201ENST00000341062 NTSR2O95665 410 aa16.16■□□□□ 0.18
TRIM60-201ENST00000341062 C3orf67Q6ZVT6 689 aa16.16■□□□□ 0.18
TRIM60-201ENST00000341062 KCNB2Q92953 911 aa16.16■□□□□ 0.18
TRIM60-201ENST00000341062 EAF2Q96CJ1 260 aaPredicted RBP16.16■□□□□ 0.18
TRIM60-201ENST00000341062 COPRSQ9NQ92 184 aa16.16■□□□□ 0.18
TRIM60-201ENST00000341062 SNRKQ9NRH2 765 aa16.16■□□□□ 0.18
TRIM60-201ENST00000341062 LMBRD1Q9NUN5 540 aa16.16■□□□□ 0.18
TRIM60-201ENST00000341062 SNX14Q9Y5W7 946 aa16.16■□□□□ 0.18
TRIM60-201ENST00000341062 TAF1P21675 1872 aa16.16■□□□□ 0.18
TRIM60-201ENST00000341062 ZBTB7AO95365 584 aa16.15■□□□□ 0.18
TRIM60-201ENST00000341062 TM4SF1P30408 202 aa16.15■□□□□ 0.18
TRIM60-201ENST00000341062 TRIM28Q13263 835 aaKnown RBP16.15■□□□□ 0.18
TRIM60-201ENST00000341062 RABL6Q3YEC7 729 aaPredicted RBP16.15■□□□□ 0.18
TRIM60-201ENST00000341062 MCTP1Q6DN14 999 aa16.15■□□□□ 0.18
TRIM60-201ENST00000341062 CWC27Q6UX04 472 aaKnown RBP16.15■□□□□ 0.18
TRIM60-201ENST00000341062 CLEC4GQ6UXB4 293 aa16.15■□□□□ 0.18
TRIM60-201ENST00000341062 CCDC191Q8NCU4 936 aa16.15■□□□□ 0.18
TRIM60-201ENST00000341062 TTC14Q96N46 770 aa16.15■□□□□ 0.18
TRIM60-201ENST00000341062 CARMIL3Q8ND23 1372 aa16.15■□□□□ 0.18
TRIM60-201ENST00000341062 ABCC12Q96J65 1359 aa16.15■□□□□ 0.18
TRIM60-201ENST00000341062 TNRC6CQ9HCJ0 1690 aaKnown RBP16.14■□□□□ 0.17
TRIM60-201ENST00000341062 H7C1W4 665 aa16.14■□□□□ 0.17
TRIM60-201ENST00000341062 BRD1O95696 1058 aa16.14■□□□□ 0.17
TRIM60-201ENST00000341062 UPF3BQ9BZI7 483 aaKnown RBP16.14■□□□□ 0.17
TRIM60-201ENST00000341062 DDX49Q9Y6V7 483 aaKnown RBP16.14■□□□□ 0.17
TRIM60-201ENST00000341062 HCLS1P14317 486 aaPredicted RBP16.14■□□□□ 0.17
TRIM60-201ENST00000341062 ERFEQ4G0M1 354 aa16.14■□□□□ 0.17
TRIM60-201ENST00000341062 FAM43AQ8N2R8 423 aa16.14■□□□□ 0.17
TRIM60-201ENST00000341062 TRMT112Q9UI30 125 aaKnown RBP16.14■□□□□ 0.17
TRIM60-201ENST00000341062 LAMB2P55268 1798 aa16.13■□□□□ 0.17
TRIM60-201ENST00000341062 POLRMTO00411 1230 aaKnown RBP16.13■□□□□ 0.17
TRIM60-201ENST00000341062 CCDC85AQ96PX6 553 aaPredicted RBP16.13■□□□□ 0.17
TRIM60-201ENST00000341062 ZNF652Q9Y2D9 606 aa16.13■□□□□ 0.17
TRIM60-201ENST00000341062 RFX5P48382 616 aaPredicted RBP16.12■□□□□ 0.17
TRIM60-201ENST00000341062 HSP90AB3PQ58FF7 597 aa16.12■□□□□ 0.17
TRIM60-201ENST00000341062 SLC51AQ86UW1 340 aa16.12■□□□□ 0.17
TRIM60-201ENST00000341062 RASEFQ8IZ41 740 aa16.12■□□□□ 0.17
TRIM60-201ENST00000341062 SETDB2Q96T68 719 aa16.12■□□□□ 0.17
TRIM60-201ENST00000341062 TM6SF1Q9BZW5 370 aa16.12■□□□□ 0.17
TRIM60-201ENST00000341062 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.12■□□□□ 0.17
TRIM60-201ENST00000341062 ANKRD31Q8N7Z5 1873 aa16.12■□□□□ 0.17
TRIM60-201ENST00000341062 MMP10P09238 476 aa16.12■□□□□ 0.17
TRIM60-201ENST00000341062 GAS2L3Q86XJ1 694 aa16.12■□□□□ 0.17
TRIM60-201ENST00000341062 ATF5Q9Y2D1 282 aaPredicted RBP16.12■□□□□ 0.17
TRIM60-201ENST00000341062 MYH3P11055 1940 aa16.11■□□□□ 0.17
TRIM60-201ENST00000341062 PCCAP05165 728 aaPredicted RBP16.11■□□□□ 0.17
TRIM60-201ENST00000341062 FOXO4P98177 505 aa16.11■□□□□ 0.17
TRIM60-201ENST00000341062 ZBTB38Q8NAP3 1195 aaPredicted RBP16.11■□□□□ 0.17
TRIM60-201ENST00000341062 FLAD1Q8NFF5 587 aa16.11■□□□□ 0.17
TRIM60-201ENST00000341062 NRXN2Q9P2S2 1712 aa16.1■□□□□ 0.17
TRIM60-201ENST00000341062 CCDC171Q6TFL3 1326 aa16.1■□□□□ 0.17
TRIM60-201ENST00000341062 ZNF445P59923 1031 aa16.1■□□□□ 0.17
TRIM60-201ENST00000341062 UTP14AQ9BVJ6 771 aaKnown RBP16.1■□□□□ 0.17
TRIM60-201ENST00000341062 PANK2Q9BZ23 570 aa16.1■□□□□ 0.17
TRIM60-201ENST00000341062 RFX7Q2KHR2 1363 aa16.1■□□□□ 0.17
TRIM60-201ENST00000341062 SERPINB2P05120 415 aa16.1■□□□□ 0.17
TRIM60-201ENST00000341062 PTPN12Q05209 780 aaKnown RBP16.1■□□□□ 0.17
TRIM60-201ENST00000341062 PRR5LQ6MZQ0 368 aa16.1■□□□□ 0.17
TRIM60-201ENST00000341062 NBPF5PQ86XG9 351 aaPredicted RBP16.1■□□□□ 0.17
TRIM60-201ENST00000341062 CCDC8Q9H0W5 538 aaPredicted RBP16.1■□□□□ 0.17
TRIM60-201ENST00000341062 IRS4O14654 1257 aaPredicted RBP16.09■□□□□ 0.17
TRIM60-201ENST00000341062 PTH1RQ03431 593 aa16.09■□□□□ 0.17
TRIM60-201ENST00000341062 NECTIN1Q15223 517 aa16.09■□□□□ 0.17
TRIM60-201ENST00000341062 KLHDC4Q8TBB5 520 aa16.09■□□□□ 0.17
TRIM60-201ENST00000341062 SIL1Q9H173 461 aa16.09■□□□□ 0.17
TRIM60-201ENST00000341062 TLR7Q9NYK1 1049 aaKnown RBP16.09■□□□□ 0.17
TRIM60-201ENST00000341062 LIMCH1Q9UPQ0 1083 aa16.09■□□□□ 0.17
TRIM60-201ENST00000341062 MED23Q9ULK4 1368 aa16.09■□□□□ 0.17
TRIM60-201ENST00000341062 PARP10Q53GL7 1025 aa16.08■□□□□ 0.17
TRIM60-201ENST00000341062 VPS53Q5VIR6 699 aa16.08■□□□□ 0.17
TRIM60-201ENST00000341062 MAP4K1Q92918 833 aa16.08■□□□□ 0.17
TRIM60-201ENST00000341062 TCHHQ07283 1943 aa16.08■□□□□ 0.16
TRIM60-201ENST00000341062 WDR33Q9C0J8 1336 aaKnown RBP16.08■□□□□ 0.16
TRIM60-201ENST00000341062 PRPF40AO75400 957 aaKnown RBP16.08■□□□□ 0.16
TRIM60-201ENST00000341062 ATP5JP18859 108 aa16.08■□□□□ 0.16
TRIM60-201ENST00000341062 AK2P54819 239 aa16.08■□□□□ 0.16
TRIM60-201ENST00000341062 NOL8Q76FK4 1167 aaKnown RBP16.08■□□□□ 0.16
TRIM60-201ENST00000341062 NLGN1Q8N2Q7 840 aa16.08■□□□□ 0.16
TRIM60-201ENST00000341062 ZSWIM6Q9HCJ5 1215 aa16.08■□□□□ 0.16
TRIM60-201ENST00000341062 RTN4Q9NQC3 1192 aaKnown RBP16.08■□□□□ 0.16
TRIM60-201ENST00000341062 SH3TC1Q8TE82 1336 aa16.07■□□□□ 0.16
TRIM60-201ENST00000341062 RGL2O15211 777 aa16.07■□□□□ 0.16
TRIM60-201ENST00000341062 NMIQ13287 307 aaPredicted RBP16.07■□□□□ 0.16
TRIM60-201ENST00000341062 LMBR1LQ6UX01 489 aa16.07■□□□□ 0.16
TRIM60-201ENST00000341062 RUFY3Q7L099 469 aa16.07■□□□□ 0.16
TRIM60-201ENST00000341062 SPEF2Q9C093 1822 aa16.06■□□□□ 0.16
TRIM60-201ENST00000341062 MBD3O95983 291 aa16.06■□□□□ 0.16
TRIM60-201ENST00000341062 CASTP20810 708 aaKnown RBP16.06■□□□□ 0.16
TRIM60-201ENST00000341062 TNNI3KQ59H18 835 aa16.06■□□□□ 0.16
TRIM60-201ENST00000341062 GPT2Q8TD30 523 aa16.06■□□□□ 0.16
TRIM60-201ENST00000341062 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.06■□□□□ 0.16
TRIM60-201ENST00000341062 FPGT-TNNI3KV9GXZ4 949 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms