RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 MS4A1P11836 297 aa16.51■□□□□ 0.23
TUBD1-202ENST00000340993 RABL6Q3YEC7 729 aaPredicted RBP16.51■□□□□ 0.23
TUBD1-202ENST00000340993 SOGA3Q5TF21 947 aa16.51■□□□□ 0.23
TUBD1-202ENST00000340993 BCL11AQ9H165 835 aa16.51■□□□□ 0.23
TUBD1-202ENST00000340993 TIAM2Q8IVF5 1701 aa16.51■□□□□ 0.23
TUBD1-202ENST00000340993 SRGAP3O43295 1099 aa16.51■□□□□ 0.23
TUBD1-202ENST00000340993 UFL1O94874 794 aa16.51■□□□□ 0.23
TUBD1-202ENST00000340993 FKBP4Q02790 459 aaKnown RBP eCLIP16.51■□□□□ 0.23
TUBD1-202ENST00000340993 AOC3Q16853 763 aa16.51■□□□□ 0.23
TUBD1-202ENST00000340993 LRRC24Q50LG9 513 aa16.51■□□□□ 0.23
TUBD1-202ENST00000340993 LDHAL6AQ6ZMR3 332 aa16.51■□□□□ 0.23
TUBD1-202ENST00000340993 RTKN2Q8IZC4 609 aa16.51■□□□□ 0.23
TUBD1-202ENST00000340993 CRBNQ96SW2 442 aa16.51■□□□□ 0.23
TUBD1-202ENST00000340993 MINPP1Q9UNW1 487 aa16.51■□□□□ 0.23
TUBD1-202ENST00000340993 RTL9Q8NET4 1388 aa16.51■□□□□ 0.23
TUBD1-202ENST00000340993 A0A1B0GUL6 1792 aa16.5■□□□□ 0.23
TUBD1-202ENST00000340993 PNMA6EA0A0J9YXQ4 647 aa16.5■□□□□ 0.23
TUBD1-202ENST00000340993 DUOX1Q9NRD9 1551 aa16.5■□□□□ 0.23
TUBD1-202ENST00000340993 YY1P25490 414 aa16.49■□□□□ 0.23
TUBD1-202ENST00000340993 CHRNDQ07001 517 aa16.49■□□□□ 0.23
TUBD1-202ENST00000340993 BSDC1Q9NW68 430 aaPredicted RBP16.49■□□□□ 0.23
TUBD1-202ENST00000340993 POLLQ9UGP5 575 aa16.49■□□□□ 0.23
TUBD1-202ENST00000340993 PPIP5K2O43314 1243 aa16.49■□□□□ 0.23
TUBD1-202ENST00000340993 LMNB1P20700 586 aa16.49■□□□□ 0.23
TUBD1-202ENST00000340993 COL4A5P29400 1685 aa16.49■□□□□ 0.23
TUBD1-202ENST00000340993 LARGE2Q8N3Y3 721 aa16.49■□□□□ 0.23
TUBD1-202ENST00000340993 SNED1Q8TER0 1413 aa16.49■□□□□ 0.23
TUBD1-202ENST00000340993 DDX19BQ9UMR2 479 aa16.49■□□□□ 0.23
TUBD1-202ENST00000340993 DICER1Q9UPY3 1922 aaKnown RBP16.48■□□□□ 0.23
TUBD1-202ENST00000340993 KCNJ4P48050 445 aa16.48■□□□□ 0.23
TUBD1-202ENST00000340993 PDE3AQ14432 1141 aa16.48■□□□□ 0.23
TUBD1-202ENST00000340993 LTBP1Q14766 1721 aa16.47■□□□□ 0.23
TUBD1-202ENST00000340993 KLRK1P26718 216 aa16.47■□□□□ 0.23
TUBD1-202ENST00000340993 IARSP41252 1262 aaKnown RBP16.47■□□□□ 0.23
TUBD1-202ENST00000340993 RFX5P48382 616 aaPredicted RBP16.47■□□□□ 0.23
TUBD1-202ENST00000340993 DOK7Q18PE1 504 aa16.47■□□□□ 0.23
TUBD1-202ENST00000340993 TBC1D16Q8TBP0 767 aa16.47■□□□□ 0.23
TUBD1-202ENST00000340993 GGA1Q9UJY5 639 aa16.47■□□□□ 0.23
TUBD1-202ENST00000340993 METTL24Q5JXM2 366 aa16.46■□□□□ 0.23
TUBD1-202ENST00000340993 CC2D2BQ6DHV5 1058 aa16.46■□□□□ 0.23
TUBD1-202ENST00000340993 TMC4Q7Z404 712 aa16.46■□□□□ 0.23
TUBD1-202ENST00000340993 DBNDD1Q9H9R9 158 aa16.46■□□□□ 0.23
TUBD1-202ENST00000340993 XDHP47989 1333 aa16.46■□□□□ 0.23
TUBD1-202ENST00000340993 PTPN12Q05209 780 aaKnown RBP16.46■□□□□ 0.22
TUBD1-202ENST00000340993 PSMD1Q99460 953 aa16.46■□□□□ 0.22
TUBD1-202ENST00000340993 HDAC5Q9UQL6 1122 aa16.46■□□□□ 0.22
TUBD1-202ENST00000340993 APBB1O00213 710 aa16.45■□□□□ 0.22
TUBD1-202ENST00000340993 WASHC4Q2M389 1173 aa16.45■□□□□ 0.22
TUBD1-202ENST00000340993 CEP85Q6P2H3 762 aa16.45■□□□□ 0.22
TUBD1-202ENST00000340993 ZBTB40Q9NUA8 1239 aa16.44■□□□□ 0.22
TUBD1-202ENST00000340993 G3V3G9 751 aa16.43■□□□□ 0.22
TUBD1-202ENST00000340993 DCAF8Q5TAQ9 597 aa16.43■□□□□ 0.22
TUBD1-202ENST00000340993 TXNRD3Q86VQ6 643 aa16.43■□□□□ 0.22
TUBD1-202ENST00000340993 ZNF804BA4D1E1 1349 aa16.43■□□□□ 0.22
TUBD1-202ENST00000340993 LTBP3Q9NS15 1303 aa16.43■□□□□ 0.22
TUBD1-202ENST00000340993 OS9Q13438 667 aaPredicted RBP16.43■□□□□ 0.22
TUBD1-202ENST00000340993 NIM1KQ8IY84 436 aa16.43■□□□□ 0.22
TUBD1-202ENST00000340993 JDP2Q8WYK2 163 aa16.43■□□□□ 0.22
TUBD1-202ENST00000340993 FBXW7Q969H0 707 aa16.43■□□□□ 0.22
TUBD1-202ENST00000340993 ZNF541Q9H0D2 1346 aa16.42■□□□□ 0.22
TUBD1-202ENST00000340993 EYA2O00167 538 aa16.42■□□□□ 0.22
TUBD1-202ENST00000340993 ATP8B2P98198 1209 aa16.42■□□□□ 0.22
TUBD1-202ENST00000340993 SUPT20HQ8NEM7 779 aa16.42■□□□□ 0.22
TUBD1-202ENST00000340993 EXOC6Q8TAG9 804 aa16.42■□□□□ 0.22
TUBD1-202ENST00000340993 ZC3H12CQ9C0D7 883 aaKnown RBP16.42■□□□□ 0.22
TUBD1-202ENST00000340993 ANKRD2Q9GZV1 360 aa16.42■□□□□ 0.22
TUBD1-202ENST00000340993 RIPOR2Q9Y4F9 1068 aa16.42■□□□□ 0.22
TUBD1-202ENST00000340993 GJA3Q9Y6H8 435 aa16.42■□□□□ 0.22
TUBD1-202ENST00000340993 RAD17O75943 681 aa16.41■□□□□ 0.22
TUBD1-202ENST00000340993 ATP2B4P23634 1241 aa16.41■□□□□ 0.22
TUBD1-202ENST00000340993 ATG9AQ7Z3C6 839 aa16.41■□□□□ 0.22
TUBD1-202ENST00000340993 RTFDC1Q9BY42 306 aaPredicted RBP16.41■□□□□ 0.22
TUBD1-202ENST00000340993 KCNQ5Q9NR82 932 aa16.41■□□□□ 0.22
TUBD1-202ENST00000340993 PODXL2Q9NZ53 605 aa16.41■□□□□ 0.22
TUBD1-202ENST00000340993 JAG2Q9Y219 1238 aa16.41■□□□□ 0.22
TUBD1-202ENST00000340993 EXOC6BQ9Y2D4 811 aa16.41■□□□□ 0.22
TUBD1-202ENST00000340993 SCN9AQ15858 1988 aa16.41■□□□□ 0.22
TUBD1-202ENST00000340993 SURF6O75683 361 aaKnown RBP16.41■□□□□ 0.22
TUBD1-202ENST00000340993 EYA3Q99504 573 aa16.41■□□□□ 0.22
TUBD1-202ENST00000340993 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.41■□□□□ 0.22
TUBD1-202ENST00000340993 ECE2O60344 883 aa16.4■□□□□ 0.22
TUBD1-202ENST00000340993 KIAA2012Q0VF49 1180 aa16.4■□□□□ 0.22
TUBD1-202ENST00000340993 MTX1Q13505 466 aa16.4■□□□□ 0.22
TUBD1-202ENST00000340993 MROH5Q6ZUA9 1318 aa16.4■□□□□ 0.22
TUBD1-202ENST00000340993 DDNO94850 711 aaPredicted RBP16.39■□□□□ 0.21
TUBD1-202ENST00000340993 TFCP2Q12800 502 aa16.39■□□□□ 0.21
TUBD1-202ENST00000340993 G3BP1Q13283 466 aaKnown RBP eCLIP16.39■□□□□ 0.21
TUBD1-202ENST00000340993 SIRT2Q8IXJ6 389 aa16.39■□□□□ 0.21
TUBD1-202ENST00000340993 IQSEC3Q9UPP2 1182 aaPredicted RBP16.39■□□□□ 0.21
TUBD1-202ENST00000340993 YDJCA8MPS7 323 aa16.38■□□□□ 0.21
TUBD1-202ENST00000340993 GYG1P46976 350 aa16.38■□□□□ 0.21
TUBD1-202ENST00000340993 POLA2Q14181 598 aa16.38■□□□□ 0.21
TUBD1-202ENST00000340993 GRIPAP1Q4V328 841 aa16.38■□□□□ 0.21
TUBD1-202ENST00000340993 COPRSQ9NQ92 184 aa16.38■□□□□ 0.21
TUBD1-202ENST00000340993 SSH3Q8TE77 659 aa16.38■□□□□ 0.21
TUBD1-202ENST00000340993 CEP126Q9P2H0 1117 aa16.38■□□□□ 0.21
TUBD1-202ENST00000340993 LEMD3Q9Y2U8 911 aa16.38■□□□□ 0.21
TUBD1-202ENST00000340993 PCDHB15Q9Y5E8 787 aa16.38■□□□□ 0.21
TUBD1-202ENST00000340993 PDE8BO95263 885 aa16.37■□□□□ 0.21
TUBD1-202ENST00000340993 EIF6P56537 245 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms