RNA–Protein interactions for RNA: ENST00000340513.4

TPX2-202, Transcript of TPX2, microtubule nucleation factor, humanhuman

TSL 1 (best) BASIC

Gene TPX2, Length 3,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPX2-202ENST00000340513 TMEM110Q86TL2 294 aa13.71□□□□□ -0.22
TPX2-202ENST00000340513 SYCP3Q8IZU3 236 aa13.71□□□□□ -0.22
TPX2-202ENST00000340513 NAT10Q9H0A0 1025 aaKnown RBP13.71□□□□□ -0.22
TPX2-202ENST00000340513 PER1O15534 1290 aaPredicted RBP13.7□□□□□ -0.22
TPX2-202ENST00000340513 CDC45O75419 566 aa13.7□□□□□ -0.22
TPX2-202ENST00000340513 ICA1Q05084 483 aa13.7□□□□□ -0.22
TPX2-202ENST00000340513 FAM114A1Q8IWE2 563 aa13.7□□□□□ -0.22
TPX2-202ENST00000340513 BCAS4Q8TDM0 211 aa13.7□□□□□ -0.22
TPX2-202ENST00000340513 FGD6Q6ZV73 1430 aa13.7□□□□□ -0.22
TPX2-202ENST00000340513 ZNF521Q96K83 1311 aa13.7□□□□□ -0.22
TPX2-202ENST00000340513 U2AF1L5P0DN76 240 aaPredicted RBP13.7□□□□□ -0.22
TPX2-202ENST00000340513 U2AF1Q01081 240 aaKnown RBP eCLIP13.7□□□□□ -0.22
TPX2-202ENST00000340513 PLEKHG4BQ96PX9 1271 aa13.7□□□□□ -0.22
TPX2-202ENST00000340513 ZNF165P49910 485 aa13.69□□□□□ -0.22
TPX2-202ENST00000340513 AFAP1L1Q8TED9 768 aa13.69□□□□□ -0.22
TPX2-202ENST00000340513 TBC1D31Q96DN5 1066 aa13.69□□□□□ -0.22
TPX2-202ENST00000340513 CBX8Q9HC52 389 aa13.69□□□□□ -0.22
TPX2-202ENST00000340513 TPCN1Q9ULQ1 816 aa13.69□□□□□ -0.22
TPX2-202ENST00000340513 UBE2HP62256 183 aa13.69□□□□□ -0.22
TPX2-202ENST00000340513 PPP2R3AQ06190 1150 aa13.69□□□□□ -0.22
TPX2-202ENST00000340513 MAP3K11Q16584 847 aa13.69□□□□□ -0.22
TPX2-202ENST00000340513 HDXQ7Z353 690 aa13.69□□□□□ -0.22
TPX2-202ENST00000340513 TBC1D5Q92609 795 aa13.69□□□□□ -0.22
TPX2-202ENST00000340513 KLC4Q9NSK0 619 aa13.69□□□□□ -0.22
TPX2-202ENST00000340513 RTN2O75298 545 aa13.69□□□□□ -0.22
TPX2-202ENST00000340513 BRD1O95696 1058 aa13.69□□□□□ -0.22
TPX2-202ENST00000340513 ZBED6P86452 979 aa13.69□□□□□ -0.22
TPX2-202ENST00000340513 TYRO3Q06418 890 aa13.69□□□□□ -0.22
TPX2-202ENST00000340513 SPTY2D1Q68D10 685 aaPredicted RBP13.69□□□□□ -0.22
TPX2-202ENST00000340513 MICALCLQ6ZW33 695 aa13.69□□□□□ -0.22
TPX2-202ENST00000340513 EXOC8Q8IYI6 725 aa13.69□□□□□ -0.22
TPX2-202ENST00000340513 RANBP17Q9H2T7 1088 aaKnown RBP13.69□□□□□ -0.22
TPX2-202ENST00000340513 BCORL1Q5H9F3 1711 aa13.68□□□□□ -0.22
TPX2-202ENST00000340513 LGR5O75473 907 aa13.68□□□□□ -0.22
TPX2-202ENST00000340513 SASH1O94885 1247 aa13.68□□□□□ -0.22
TPX2-202ENST00000340513 GNAI1P63096 354 aa13.68□□□□□ -0.22
TPX2-202ENST00000340513 MYBPC2Q14324 1141 aa13.68□□□□□ -0.22
TPX2-202ENST00000340513 BMP2KLQ5H9B9 411 aa13.68□□□□□ -0.22
TPX2-202ENST00000340513 SUGCTQ9HAC7 445 aa13.68□□□□□ -0.22
TPX2-202ENST00000340513 MAGI3Q5TCQ9 1506 aa13.68□□□□□ -0.22
TPX2-202ENST00000340513 GOLGA6L10A6NI86 522 aa13.68□□□□□ -0.22
TPX2-202ENST00000340513 EFCAB8A8MWE9 144 aa13.68□□□□□ -0.22
TPX2-202ENST00000340513 RUFY1Q96T51 708 aa13.68□□□□□ -0.22
TPX2-202ENST00000340513 PLEKHH2Q8IVE3 1493 aa13.68□□□□□ -0.22
TPX2-202ENST00000340513 IMPDH2P12268 514 aa13.68□□□□□ -0.22
TPX2-202ENST00000340513 ZNF280DQ6N043 979 aa13.68□□□□□ -0.22
TPX2-202ENST00000340513 SAPCD2Q86UD0 394 aa13.68□□□□□ -0.22
TPX2-202ENST00000340513 LZTS2Q9BRK4 669 aa13.68□□□□□ -0.22
TPX2-202ENST00000340513 PHF8Q9UPP1 1060 aa13.68□□□□□ -0.22
TPX2-202ENST00000340513 CASKIN1Q8WXD9 1431 aa13.67□□□□□ -0.22
TPX2-202ENST00000340513 NEMFO60524 1076 aa13.67□□□□□ -0.22
TPX2-202ENST00000340513 GPR161Q8N6U8 529 aaKnown RBP13.67□□□□□ -0.22
TPX2-202ENST00000340513 TRIML1Q8N9V2 468 aa13.67□□□□□ -0.22
TPX2-202ENST00000340513 EPAS1Q99814 870 aa13.67□□□□□ -0.22
TPX2-202ENST00000340513 LARP6Q9BRS8 491 aaKnown RBP13.67□□□□□ -0.22
TPX2-202ENST00000340513 NUP62CLQ9H1M0 184 aa13.67□□□□□ -0.22
TPX2-202ENST00000340513 DNAJC25Q9H1X3 360 aa13.67□□□□□ -0.22
TPX2-202ENST00000340513 TNMDQ9H2S6 317 aa13.67□□□□□ -0.22
TPX2-202ENST00000340513 A1CFQ9NQ94 594 aaKnown RBP13.67□□□□□ -0.22
TPX2-202ENST00000340513 PTPN23Q9H3S7 1636 aa13.67□□□□□ -0.22
TPX2-202ENST00000340513 SMIM24O75264 130 aa13.67□□□□□ -0.22
TPX2-202ENST00000340513 ERLIN1O75477 346 aa13.67□□□□□ -0.22
TPX2-202ENST00000340513 PRPF4BQ13523 1007 aaKnown RBP13.67□□□□□ -0.22
TPX2-202ENST00000340513 TRMT2AQ8IZ69 625 aaKnown RBP13.67□□□□□ -0.22
TPX2-202ENST00000340513 TDRD7Q8NHU6 1098 aaKnown RBP13.67□□□□□ -0.22
TPX2-202ENST00000340513 RTN3O95197 1032 aaPredicted RBP13.66□□□□□ -0.22
TPX2-202ENST00000340513 MRPL12P52815 198 aaKnown RBP13.66□□□□□ -0.22
TPX2-202ENST00000340513 RGL1Q9NZL6 768 aa13.66□□□□□ -0.22
TPX2-202ENST00000340513 DDX20Q9UHI6 824 aaKnown RBP13.66□□□□□ -0.22
TPX2-202ENST00000340513 IQSEC3Q9UPP2 1182 aaPredicted RBP13.66□□□□□ -0.22
TPX2-202ENST00000340513 WDR33Q9C0J8 1336 aaKnown RBP13.66□□□□□ -0.22
TPX2-202ENST00000340513 DYTNA2CJ06 578 aa13.66□□□□□ -0.22
TPX2-202ENST00000340513 ATP2C2O75185 946 aa13.66□□□□□ -0.22
TPX2-202ENST00000340513 UBAP1Q9NZ09 502 aa13.66□□□□□ -0.22
TPX2-202ENST00000340513 HECW1Q76N89 1606 aa13.66□□□□□ -0.22
TPX2-202ENST00000340513 RPS6KA5O75582 802 aa13.66□□□□□ -0.22
TPX2-202ENST00000340513 PDHBP11177 359 aa13.66□□□□□ -0.22
TPX2-202ENST00000340513 MPP3Q13368 585 aa13.66□□□□□ -0.22
TPX2-202ENST00000340513 SNCBQ16143 134 aa13.66□□□□□ -0.22
TPX2-202ENST00000340513 FAM81AQ8TBF8 368 aa13.66□□□□□ -0.22
TPX2-202ENST00000340513 ARPC5LQ9BPX5 153 aa13.66□□□□□ -0.22
TPX2-202ENST00000340513 UBXN6Q9BZV1 441 aa13.66□□□□□ -0.22
TPX2-202ENST00000340513 L2HGDHQ9H9P8 463 aa13.66□□□□□ -0.22
TPX2-202ENST00000340513 TMOD4Q9NZQ9 345 aa13.66□□□□□ -0.22
TPX2-202ENST00000340513 TBC1D2BQ9UPU7 963 aa13.66□□□□□ -0.22
TPX2-202ENST00000340513 TADA3O75528 432 aa13.65□□□□□ -0.22
TPX2-202ENST00000340513 ARHGAP22Q7Z5H3 698 aa13.65□□□□□ -0.22
TPX2-202ENST00000340513 ZNF777Q9ULD5 760 aaPredicted RBP13.65□□□□□ -0.22
TPX2-202ENST00000340513 CD151P48509 253 aa13.65□□□□□ -0.22
TPX2-202ENST00000340513 ZSCAN9O15535 394 aaPredicted RBP13.65□□□□□ -0.22
TPX2-202ENST00000340513 NUCB1Q02818 461 aa13.65□□□□□ -0.22
TPX2-202ENST00000340513 TMEM62Q0P6H9 643 aa13.65□□□□□ -0.22
TPX2-202ENST00000340513 LRRFIP1Q32MZ4 808 aaKnown RBP13.65□□□□□ -0.22
TPX2-202ENST00000340513 CDC37L1Q7L3B6 337 aa13.65□□□□□ -0.22
TPX2-202ENST00000340513 KIF14Q15058 1648 aa13.65□□□□□ -0.22
TPX2-202ENST00000340513 ZEB2O60315 1214 aa13.64□□□□□ -0.23
TPX2-202ENST00000340513 C17orf50Q8WW18 174 aa13.64□□□□□ -0.23
TPX2-202ENST00000340513 PPP1R13BQ96KQ4 1090 aa13.64□□□□□ -0.23
TPX2-202ENST00000340513 ANKRD30BQ9BXX2 1392 aa13.64□□□□□ -0.23
TPX2-202ENST00000340513 CD109Q6YHK3 1445 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms