RNA–Protein interactions for RNA: ENST00000340457.8

UPK3BL1-201, Transcript of uroplakin 3B like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK3BL1, Length 1,342 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1-201ENST00000340457 WDR43Q15061 677 aaKnown RBP eCLIP17.94■□□□□ 0.46
UPK3BL1-201ENST00000340457 JARID2Q92833 1246 aaPredicted RBP17.94■□□□□ 0.46
UPK3BL1-201ENST00000340457 SEC31BQ9NQW1 1179 aa17.94■□□□□ 0.46
UPK3BL1-201ENST00000340457 ASTN2O75129 1339 aaPredicted RBP17.94■□□□□ 0.46
UPK3BL1-201ENST00000340457 SCN9AQ15858 1988 aa17.93■□□□□ 0.46
UPK3BL1-201ENST00000340457 DCPSQ96C86 337 aaKnown RBP17.93■□□□□ 0.46
UPK3BL1-201ENST00000340457 EYA3Q99504 573 aa17.93■□□□□ 0.46
UPK3BL1-201ENST00000340457 GBA2Q9HCG7 927 aaPredicted RBP17.93■□□□□ 0.46
UPK3BL1-201ENST00000340457 HYPKQ9NX55 129 aa17.93■□□□□ 0.46
UPK3BL1-201ENST00000340457 ADAMTS8Q9UP79 889 aa17.93■□□□□ 0.46
UPK3BL1-201ENST00000340457 MYBBP1AQ9BQG0 1328 aaKnown RBP17.93■□□□□ 0.46
UPK3BL1-201ENST00000340457 ELL2O00472 640 aaPredicted RBP17.92■□□□□ 0.46
UPK3BL1-201ENST00000340457 HOXB7P09629 217 aa17.92■□□□□ 0.46
UPK3BL1-201ENST00000340457 RGMBQ6NW40 437 aa17.92■□□□□ 0.46
UPK3BL1-201ENST00000340457 RIC3Q7Z5B4 369 aa17.92■□□□□ 0.46
UPK3BL1-201ENST00000340457 CCDC85AQ96PX6 553 aaPredicted RBP17.92■□□□□ 0.46
UPK3BL1-201ENST00000340457 PHAXQ9H814 394 aaKnown RBP17.92■□□□□ 0.46
UPK3BL1-201ENST00000340457 MBIPQ9NS73 344 aa17.92■□□□□ 0.46
UPK3BL1-201ENST00000340457 FAM155AB1AL88 458 aaPredicted RBP17.91■□□□□ 0.46
UPK3BL1-201ENST00000340457 UFL1O94874 794 aa17.91■□□□□ 0.46
UPK3BL1-201ENST00000340457 RPS12P25398 132 aaKnown RBP17.91■□□□□ 0.46
UPK3BL1-201ENST00000340457 RGS19P49795 217 aa17.91■□□□□ 0.46
UPK3BL1-201ENST00000340457 KIF4BQ2VIQ3 1234 aa17.91■□□□□ 0.46
UPK3BL1-201ENST00000340457 C2orf69Q8N8R5 385 aa17.91■□□□□ 0.46
UPK3BL1-201ENST00000340457 ZC3H12CQ9C0D7 883 aaKnown RBP17.91■□□□□ 0.46
UPK3BL1-201ENST00000340457 GGA3Q9NZ52 723 aa17.91■□□□□ 0.46
UPK3BL1-201ENST00000340457 G3V3G9 751 aa17.9■□□□□ 0.46
UPK3BL1-201ENST00000340457 TNRC18O15417 2968 aaPredicted RBP17.9■□□□□ 0.46
UPK3BL1-201ENST00000340457 ZNF157P51786 506 aaPredicted RBP17.9■□□□□ 0.46
UPK3BL1-201ENST00000340457 KIF23Q02241 960 aaPredicted RBP17.9■□□□□ 0.46
UPK3BL1-201ENST00000340457 TRIM28Q13263 835 aaKnown RBP17.9■□□□□ 0.46
UPK3BL1-201ENST00000340457 DCAF8Q5TAQ9 597 aa17.9■□□□□ 0.46
UPK3BL1-201ENST00000340457 MYD88Q99836 296 aa17.9■□□□□ 0.46
UPK3BL1-201ENST00000340457 ANKIB1Q9P2G1 1089 aa17.9■□□□□ 0.46
UPK3BL1-201ENST00000340457 VIL1P09327 827 aaKnown RBP17.89■□□□□ 0.45
UPK3BL1-201ENST00000340457 GOLGA2Q08379 1002 aa17.89■□□□□ 0.45
UPK3BL1-201ENST00000340457 ZBTB38Q8NAP3 1195 aaPredicted RBP17.89■□□□□ 0.45
UPK3BL1-201ENST00000340457 TRPA1O75762 1119 aa17.88■□□□□ 0.45
UPK3BL1-201ENST00000340457 SULF1Q8IWU6 871 aa17.88■□□□□ 0.45
UPK3BL1-201ENST00000340457 GGA1Q9UJY5 639 aa17.88■□□□□ 0.45
UPK3BL1-201ENST00000340457 CCDC102AQ96A19 550 aa17.87■□□□□ 0.45
UPK3BL1-201ENST00000340457 CDCA5Q96FF9 252 aa17.87■□□□□ 0.45
UPK3BL1-201ENST00000340457 PODXL2Q9NZ53 605 aa17.87■□□□□ 0.45
UPK3BL1-201ENST00000340457 SCAF8Q9UPN6 1271 aaKnown RBP17.87■□□□□ 0.45
UPK3BL1-201ENST00000340457 PDE4DIPQ5VU43 2346 aa17.87■□□□□ 0.45
UPK3BL1-201ENST00000340457 WTIPA6NIX2 430 aaPredicted RBP17.86■□□□□ 0.45
UPK3BL1-201ENST00000340457 SLC34A2O95436 690 aa17.86■□□□□ 0.45
UPK3BL1-201ENST00000340457 SCARF1Q14162 830 aa17.86■□□□□ 0.45
UPK3BL1-201ENST00000340457 ANGEL2Q5VTE6 544 aaKnown RBP17.86■□□□□ 0.45
UPK3BL1-201ENST00000340457 RNF186Q9NXI6 227 aa17.86■□□□□ 0.45
UPK3BL1-201ENST00000340457 ZNF853P0CG23 659 aa17.85■□□□□ 0.45
UPK3BL1-201ENST00000340457 CCDC152Q4G0S7 254 aa17.85■□□□□ 0.45
UPK3BL1-201ENST00000340457 APAF1O14727 1248 aa17.84■□□□□ 0.45
UPK3BL1-201ENST00000340457 PCCAP05165 728 aaPredicted RBP17.84■□□□□ 0.45
UPK3BL1-201ENST00000340457 SLC10A3P09131 477 aa17.84■□□□□ 0.45
UPK3BL1-201ENST00000340457 RSBN1LQ6PCB5 846 aaPredicted RBP17.84■□□□□ 0.45
UPK3BL1-201ENST00000340457 C8orf58Q8NAV2 365 aa17.84■□□□□ 0.45
UPK3BL1-201ENST00000340457 CSRNP1Q96S65 589 aa17.84■□□□□ 0.45
UPK3BL1-201ENST00000340457 AKAP11Q9UKA4 1901 aa17.83■□□□□ 0.45
UPK3BL1-201ENST00000340457 PDE8AO60658 829 aa17.83■□□□□ 0.44
UPK3BL1-201ENST00000340457 ZNF280AP59817 542 aaPredicted RBP17.83■□□□□ 0.44
UPK3BL1-201ENST00000340457 MOB2Q70IA6 237 aa17.83■□□□□ 0.44
UPK3BL1-201ENST00000340457 CCDC191Q8NCU4 936 aa17.83■□□□□ 0.44
UPK3BL1-201ENST00000340457 CWC25Q9NXE8 425 aaPredicted RBP17.83■□□□□ 0.44
UPK3BL1-201ENST00000340457 PRAMEF18Q5VWM3 479 aa17.82■□□□□ 0.44
UPK3BL1-201ENST00000340457 ANKRD18AQ8IVF6 992 aa17.82■□□□□ 0.44
UPK3BL1-201ENST00000340457 AGBL3Q8NEM8 1001 aa17.82■□□□□ 0.44
UPK3BL1-201ENST00000340457 SAGE1Q9NXZ1 904 aa17.82■□□□□ 0.44
UPK3BL1-201ENST00000340457 XDHP47989 1333 aa17.82■□□□□ 0.44
UPK3BL1-201ENST00000340457 USP17L8P0C7I0 530 aa17.81■□□□□ 0.44
UPK3BL1-201ENST00000340457 HSP90B1P14625 803 aaKnown RBP17.81■□□□□ 0.44
UPK3BL1-201ENST00000340457 SOX10P56693 466 aa17.81■□□□□ 0.44
UPK3BL1-201ENST00000340457 GNAI1P63096 354 aa17.81■□□□□ 0.44
UPK3BL1-201ENST00000340457 GMLQ99445 158 aa17.81■□□□□ 0.44
UPK3BL1-201ENST00000340457 METTL22Q9BUU2 404 aaPredicted RBP17.81■□□□□ 0.44
UPK3BL1-201ENST00000340457 MXD3Q9BW11 206 aa17.81■□□□□ 0.44
UPK3BL1-201ENST00000340457 MYOZ2Q9NPC6 264 aa17.81■□□□□ 0.44
UPK3BL1-201ENST00000340457 IFT57Q9NWB7 429 aa17.81■□□□□ 0.44
UPK3BL1-201ENST00000340457 RASAL3Q86YV0 1011 aa17.8■□□□□ 0.44
UPK3BL1-201ENST00000340457 MAP3K2Q9Y2U5 619 aa17.8■□□□□ 0.44
UPK3BL1-201ENST00000340457 USP17L3A6NCW0 530 aa17.79■□□□□ 0.44
UPK3BL1-201ENST00000340457 USP17L4A6NCW7 530 aa17.79■□□□□ 0.44
UPK3BL1-201ENST00000340457 ATP2B4P23634 1241 aa17.79■□□□□ 0.44
UPK3BL1-201ENST00000340457 USP17L1Q7RTZ2 530 aa17.79■□□□□ 0.44
UPK3BL1-201ENST00000340457 TSPYL6Q8N831 410 aa17.79■□□□□ 0.44
UPK3BL1-201ENST00000340457 FBXW7Q969H0 707 aa17.79■□□□□ 0.44
UPK3BL1-201ENST00000340457 PSME4Q14997 1843 aa17.79■□□□□ 0.44
UPK3BL1-201ENST00000340457 UBE2Q2LH0YL09 131 aa17.78■□□□□ 0.44
UPK3BL1-201ENST00000340457 CTSWP56202 376 aa17.78■□□□□ 0.44
UPK3BL1-201ENST00000340457 NBPF9Q3BBW0 867 aa17.78■□□□□ 0.44
UPK3BL1-201ENST00000340457 SPEF2Q9C093 1822 aa17.77■□□□□ 0.44
UPK3BL1-201ENST00000340457 DDX58O95786 925 aaKnown RBP17.77■□□□□ 0.44
UPK3BL1-201ENST00000340457 IGKV5-2P06315 115 aa17.77■□□□□ 0.44
UPK3BL1-201ENST00000340457 GREM2Q9H772 168 aa17.77■□□□□ 0.44
UPK3BL1-201ENST00000340457 PI4KAP2A4QPH2 592 aa17.76■□□□□ 0.43
UPK3BL1-201ENST00000340457 TTLL12Q14166 644 aaPredicted RBP17.76■□□□□ 0.43
UPK3BL1-201ENST00000340457 CCDC30Q5VVM6 783 aa17.76■□□□□ 0.43
UPK3BL1-201ENST00000340457 PODNQ7Z5L7 613 aa17.76■□□□□ 0.43
UPK3BL1-201ENST00000340457 PI4KAP1Q8N8J0 262 aa17.76■□□□□ 0.43
UPK3BL1-201ENST00000340457 TTLL11Q8NHH1 800 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms