RNA–Protein interactions for RNA: ENST00000339598.7

OTOF-203, Transcript of otoferlin, humanhuman

TSL 1 (best) BASIC

Gene OTOF, Length 4,756 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-203ENST00000339598 PRAG1Q86YV5 1406 aa14.29□□□□□ -0.12
OTOF-203ENST00000339598 PRC1O43663 620 aa14.29□□□□□ -0.12
OTOF-203ENST00000339598 SPAG1Q07617 926 aa14.29□□□□□ -0.12
OTOF-203ENST00000339598 CHST3Q7LGC8 479 aa14.29□□□□□ -0.12
OTOF-203ENST00000339598 ZNF219Q9P2Y4 722 aaPredicted RBP14.29□□□□□ -0.12
OTOF-203ENST00000339598 CHMLP26374 656 aa14.29□□□□□ -0.12
OTOF-203ENST00000339598 ARFGAP3Q9NP61 516 aa14.29□□□□□ -0.12
OTOF-203ENST00000339598 HMGB2P26583 209 aaKnown RBP14.29□□□□□ -0.12
OTOF-203ENST00000339598 NGLY1Q96IV0 654 aa14.29□□□□□ -0.12
OTOF-203ENST00000339598 SPAG5Q96R06 1193 aa14.29□□□□□ -0.12
OTOF-203ENST00000339598 SLC4A4Q9Y6R1 1079 aa14.29□□□□□ -0.12
OTOF-203ENST00000339598 DENND4BO75064 1496 aaPredicted RBP14.29□□□□□ -0.12
OTOF-203ENST00000339598 TTC41PQ6P2S7 1318 aa14.29□□□□□ -0.12
OTOF-203ENST00000339598 AKAP4Q5JQC9 854 aa14.29□□□□□ -0.12
OTOF-203ENST00000339598 HOOK3Q86VS8 718 aa14.29□□□□□ -0.12
OTOF-203ENST00000339598 INTS4Q96HW7 963 aaKnown RBP14.29□□□□□ -0.12
OTOF-203ENST00000339598 LAMC3Q9Y6N6 1575 aa14.28□□□□□ -0.12
OTOF-203ENST00000339598 CADPS2Q86UW7 1296 aa14.28□□□□□ -0.12
OTOF-203ENST00000339598 CNNM2Q9H8M5 875 aa14.28□□□□□ -0.12
OTOF-203ENST00000339598 RMND1Q9NWS8 449 aa14.28□□□□□ -0.12
OTOF-203ENST00000339598 CCDC175P0C221 793 aa14.28□□□□□ -0.12
OTOF-203ENST00000339598 SYT1P21579 422 aa14.28□□□□□ -0.12
OTOF-203ENST00000339598 CHMP4BP1P59074 171 aa14.28□□□□□ -0.12
OTOF-203ENST00000339598 SMC1AQ14683 1233 aaKnown RBP14.28□□□□□ -0.12
OTOF-203ENST00000339598 IFIT1BQ5T764 474 aaKnown RBP14.28□□□□□ -0.12
OTOF-203ENST00000339598 CREB3L3Q68CJ9 461 aa14.28□□□□□ -0.12
OTOF-203ENST00000339598 PPP4R3AQ6IN85 833 aa14.28□□□□□ -0.12
OTOF-203ENST00000339598 KRT222Q8N1A0 295 aa14.28□□□□□ -0.12
OTOF-203ENST00000339598 SCLT1Q96NL6 688 aa14.28□□□□□ -0.12
OTOF-203ENST00000339598 USP26Q9BXU7 913 aa14.28□□□□□ -0.12
OTOF-203ENST00000339598 INCENPQ9NQS7 918 aa14.28□□□□□ -0.12
OTOF-203ENST00000339598 EXOC1Q9NV70 894 aa14.28□□□□□ -0.12
OTOF-203ENST00000339598 PAG1Q9NWQ8 432 aa14.28□□□□□ -0.12
OTOF-203ENST00000339598 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.28□□□□□ -0.12
OTOF-203ENST00000339598 V9GYY5 206 aaPredicted RBP14.28□□□□□ -0.12
OTOF-203ENST00000339598 MCM6Q14566 821 aa14.28□□□□□ -0.12
OTOF-203ENST00000339598 CCDC152Q4G0S7 254 aa14.28□□□□□ -0.12
OTOF-203ENST00000339598 EHBP1Q8NDI1 1231 aa14.28□□□□□ -0.12
OTOF-203ENST00000339598 TAOK3Q9H2K8 898 aa14.28□□□□□ -0.12
OTOF-203ENST00000339598 FEZ1Q99689 392 aa14.27□□□□□ -0.12
OTOF-203ENST00000339598 KDM5BQ9UGL1 1544 aa14.27□□□□□ -0.12
OTOF-203ENST00000339598 SBNO2Q9Y2G9 1366 aa14.27□□□□□ -0.12
OTOF-203ENST00000339598 CUL7Q14999 1698 aa14.27□□□□□ -0.12
OTOF-203ENST00000339598 TRIM75PA6NK02 468 aa14.27□□□□□ -0.12
OTOF-203ENST00000339598 WDR78Q5VTH9 848 aa14.27□□□□□ -0.12
OTOF-203ENST00000339598 MAATS1Q7Z4T9 603 aa14.27□□□□□ -0.12
OTOF-203ENST00000339598 CCDC91Q7Z6B0 441 aa14.27□□□□□ -0.12
OTOF-203ENST00000339598 ZCRB1Q8TBF4 217 aaKnown RBP14.27□□□□□ -0.12
OTOF-203ENST00000339598 SOS1Q07889 1333 aaPredicted RBP14.27□□□□□ -0.12
OTOF-203ENST00000339598 STAT6P42226 847 aa14.27□□□□□ -0.13
OTOF-203ENST00000339598 PTGS1P23219 599 aa14.27□□□□□ -0.13
OTOF-203ENST00000339598 CYLC1P35663 651 aaPredicted RBP14.27□□□□□ -0.13
OTOF-203ENST00000339598 SYCP3Q8IZU3 236 aa14.27□□□□□ -0.13
OTOF-203ENST00000339598 CTAGE1Q96RT6 745 aa14.27□□□□□ -0.13
OTOF-203ENST00000339598 THOC2Q8NI27 1593 aaKnown RBP14.26□□□□□ -0.13
OTOF-203ENST00000339598 GCOM1H8Y6P7 765 aaPredicted RBP14.26□□□□□ -0.13
OTOF-203ENST00000339598 PSMA7O14818 248 aa14.26□□□□□ -0.13
OTOF-203ENST00000339598 ZBTB7BO15156 539 aaPredicted RBP14.26□□□□□ -0.13
OTOF-203ENST00000339598 MYZAPP0CAP1 466 aa14.26□□□□□ -0.13
OTOF-203ENST00000339598 LRRC59Q96AG4 307 aaKnown RBP14.26□□□□□ -0.13
OTOF-203ENST00000339598 FAM107BQ9H098 131 aa14.26□□□□□ -0.13
OTOF-203ENST00000339598 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.26□□□□□ -0.13
OTOF-203ENST00000339598 CTAGE15A4D2H0 777 aa14.26□□□□□ -0.13
OTOF-203ENST00000339598 CTAGE8P0CG41 777 aa14.26□□□□□ -0.13
OTOF-203ENST00000339598 CPA1P15085 419 aa14.26□□□□□ -0.13
OTOF-203ENST00000339598 CTNNA2P26232 953 aa14.26□□□□□ -0.13
OTOF-203ENST00000339598 APOBRQ0VD83 1088 aa14.26□□□□□ -0.13
OTOF-203ENST00000339598 CTAGE6Q86UF2 777 aa14.26□□□□□ -0.13
OTOF-203ENST00000339598 CTAGE4Q8IX94 777 aa14.26□□□□□ -0.13
OTOF-203ENST00000339598 DHX32Q7L7V1 743 aaKnown RBP14.26□□□□□ -0.13
OTOF-203ENST00000339598 NFATC2IPQ8NCF5 419 aa14.26□□□□□ -0.13
OTOF-203ENST00000339598 LRRC27Q9C0I9 530 aa14.26□□□□□ -0.13
OTOF-203ENST00000339598 KAT6BQ8WYB5 2073 aa14.26□□□□□ -0.13
OTOF-203ENST00000339598 MICALCLQ6ZW33 695 aa14.26□□□□□ -0.13
OTOF-203ENST00000339598 STXBP4Q6ZWJ1 553 aa14.26□□□□□ -0.13
OTOF-203ENST00000339598 DHX58Q96C10 678 aa14.26□□□□□ -0.13
OTOF-203ENST00000339598 DRC1Q96MC2 740 aa14.26□□□□□ -0.13
OTOF-203ENST00000339598 NBPF6Q5VWK0 638 aa14.25□□□□□ -0.13
OTOF-203ENST00000339598 NBPF5PQ86XG9 351 aaPredicted RBP14.25□□□□□ -0.13
OTOF-203ENST00000339598 NBPF4Q96M43 638 aa14.25□□□□□ -0.13
OTOF-203ENST00000339598 EYA1Q99502 592 aa14.25□□□□□ -0.13
OTOF-203ENST00000339598 PPIP5K1Q6PFW1 1433 aa14.25□□□□□ -0.13
OTOF-203ENST00000339598 PTPDC1A2A3K4 754 aa14.25□□□□□ -0.13
OTOF-203ENST00000339598 SLU7O95391 586 aaKnown RBP14.25□□□□□ -0.13
OTOF-203ENST00000339598 HLA-DOAP06340 250 aa14.25□□□□□ -0.13
OTOF-203ENST00000339598 UBE4AQ14139 1066 aa14.25□□□□□ -0.13
OTOF-203ENST00000339598 PUS7Q96PZ0 661 aaKnown RBP14.25□□□□□ -0.13
OTOF-203ENST00000339598 CABP5Q9NP86 173 aa14.25□□□□□ -0.13
OTOF-203ENST00000339598 SAMM50Q9Y512 469 aa14.25□□□□□ -0.13
OTOF-203ENST00000339598 NUP160Q12769 1436 aa14.25□□□□□ -0.13
OTOF-203ENST00000339598 GNAQP50148 359 aa14.25□□□□□ -0.13
OTOF-203ENST00000339598 HS1BP3Q53T59 392 aa14.25□□□□□ -0.13
OTOF-203ENST00000339598 NAA16Q6N069 864 aaPredicted RBP14.25□□□□□ -0.13
OTOF-203ENST00000339598 RTL1A6NKG5 1358 aa14.25□□□□□ -0.13
OTOF-203ENST00000339598 EHMT1Q9H9B1 1298 aa14.25□□□□□ -0.13
OTOF-203ENST00000339598 TSPY3P0CV98 308 aa14.24□□□□□ -0.13
OTOF-203ENST00000339598 TSPY8P0CW00 308 aa14.24□□□□□ -0.13
OTOF-203ENST00000339598 GIMAP7Q8NHV1 300 aa14.24□□□□□ -0.13
OTOF-203ENST00000339598 OTUD7AQ8TE49 926 aaPredicted RBP14.24□□□□□ -0.13
OTOF-203ENST00000339598 TBCAO75347 108 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms