RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 PSMD14O00487 310 aa20.27■□□□□ 0.84
LINC01116-202ENST00000339037 POLLQ9UGP5 575 aa20.27■□□□□ 0.84
LINC01116-202ENST00000339037 RIMBP2O15034 1052 aa20.26■□□□□ 0.83
LINC01116-202ENST00000339037 GPSM2P81274 684 aa20.26■□□□□ 0.83
LINC01116-202ENST00000339037 GOLGA2Q08379 1002 aa20.26■□□□□ 0.83
LINC01116-202ENST00000339037 EYA3Q99504 573 aa20.26■□□□□ 0.83
LINC01116-202ENST00000339037 CA12O43570 354 aa20.25■□□□□ 0.83
LINC01116-202ENST00000339037 ECE2O60344 883 aa20.25■□□□□ 0.83
LINC01116-202ENST00000339037 RPS12P25398 132 aaKnown RBP20.25■□□□□ 0.83
LINC01116-202ENST00000339037 RPS8P62241 208 aaKnown RBP20.25■□□□□ 0.83
LINC01116-202ENST00000339037 SAMD7Q7Z3H4 446 aa20.25■□□□□ 0.83
LINC01116-202ENST00000339037 RIC3Q7Z5B4 369 aa20.25■□□□□ 0.83
LINC01116-202ENST00000339037 TSKSQ9UJT2 592 aa20.25■□□□□ 0.83
LINC01116-202ENST00000339037 COL4A1P02462 1669 aa20.24■□□□□ 0.83
LINC01116-202ENST00000339037 HSP90B1P14625 803 aaKnown RBP20.24■□□□□ 0.83
LINC01116-202ENST00000339037 BRPF1P55201 1214 aaPredicted RBP20.24■□□□□ 0.83
LINC01116-202ENST00000339037 USP48Q86UV5 1035 aa20.24■□□□□ 0.83
LINC01116-202ENST00000339037 ZBTB38Q8NAP3 1195 aaPredicted RBP20.24■□□□□ 0.83
LINC01116-202ENST00000339037 TBC1D16Q8TBP0 767 aa20.24■□□□□ 0.83
LINC01116-202ENST00000339037 ZNF853P0CG23 659 aa20.23■□□□□ 0.83
LINC01116-202ENST00000339037 CACNB1Q02641 598 aaPredicted RBP20.23■□□□□ 0.83
LINC01116-202ENST00000339037 CALD1Q05682 793 aaKnown RBP20.23■□□□□ 0.83
LINC01116-202ENST00000339037 DOK7Q18PE1 504 aa20.23■□□□□ 0.83
LINC01116-202ENST00000339037 TBC1D10BQ4KMP7 808 aaPredicted RBP20.23■□□□□ 0.83
LINC01116-202ENST00000339037 KRT26Q7Z3Y9 468 aa20.23■□□□□ 0.83
LINC01116-202ENST00000339037 IFT57Q9NWB7 429 aa20.23■□□□□ 0.83
LINC01116-202ENST00000339037 RTL9Q8NET4 1388 aa20.22■□□□□ 0.83
LINC01116-202ENST00000339037 EGFRP00533 1210 aa20.22■□□□□ 0.83
LINC01116-202ENST00000339037 HUNKP57058 714 aa20.22■□□□□ 0.83
LINC01116-202ENST00000339037 ZC3H12CQ9C0D7 883 aaKnown RBP20.22■□□□□ 0.83
LINC01116-202ENST00000339037 KCNQ5Q9NR82 932 aa20.22■□□□□ 0.83
LINC01116-202ENST00000339037 ELL2O00472 640 aaPredicted RBP20.21■□□□□ 0.83
LINC01116-202ENST00000339037 GNAI1P63096 354 aa20.21■□□□□ 0.83
LINC01116-202ENST00000339037 NOGQ13253 232 aa20.21■□□□□ 0.83
LINC01116-202ENST00000339037 DLK2Q6UY11 383 aa20.21■□□□□ 0.83
LINC01116-202ENST00000339037 MYD88Q99836 296 aa20.21■□□□□ 0.83
LINC01116-202ENST00000339037 PHAXQ9H814 394 aaKnown RBP20.21■□□□□ 0.83
LINC01116-202ENST00000339037 PODXL2Q9NZ53 605 aa20.21■□□□□ 0.83
LINC01116-202ENST00000339037 ANKIB1Q9P2G1 1089 aa20.21■□□□□ 0.83
LINC01116-202ENST00000339037 APAF1O14727 1248 aa20.2■□□□□ 0.82
LINC01116-202ENST00000339037 UFL1O94874 794 aa20.2■□□□□ 0.82
LINC01116-202ENST00000339037 RBM26Q5T8P6 1007 aaKnown RBP20.2■□□□□ 0.82
LINC01116-202ENST00000339037 CCDC191Q8NCU4 936 aa20.2■□□□□ 0.82
LINC01116-202ENST00000339037 DCPSQ96C86 337 aaKnown RBP20.2■□□□□ 0.82
LINC01116-202ENST00000339037 PRKRIP1Q9H875 184 aaPredicted RBP20.2■□□□□ 0.82
LINC01116-202ENST00000339037 SEC31BQ9NQW1 1179 aa20.2■□□□□ 0.82
LINC01116-202ENST00000339037 G3V3G9 751 aa20.19■□□□□ 0.82
LINC01116-202ENST00000339037 CCDC152Q4G0S7 254 aa20.19■□□□□ 0.82
LINC01116-202ENST00000339037 DCAF8Q5TAQ9 597 aa20.19■□□□□ 0.82
LINC01116-202ENST00000339037 GGA1Q9UJY5 639 aa20.19■□□□□ 0.82
LINC01116-202ENST00000339037 CCDC85CA6NKD9 419 aa20.18■□□□□ 0.82
LINC01116-202ENST00000339037 PCCAP05165 728 aaPredicted RBP20.18■□□□□ 0.82
LINC01116-202ENST00000339037 KIF4BQ2VIQ3 1234 aa20.18■□□□□ 0.82
LINC01116-202ENST00000339037 GBA2Q9HCG7 927 aaPredicted RBP20.18■□□□□ 0.82
LINC01116-202ENST00000339037 CWC25Q9NXE8 425 aaPredicted RBP20.18■□□□□ 0.82
LINC01116-202ENST00000339037 ADM5C9JUS6 153 aa20.17■□□□□ 0.82
LINC01116-202ENST00000339037 DDX58O95786 925 aaKnown RBP20.17■□□□□ 0.82
LINC01116-202ENST00000339037 VIL1P09327 827 aaKnown RBP20.17■□□□□ 0.82
LINC01116-202ENST00000339037 C2orf69Q8N8R5 385 aa20.17■□□□□ 0.82
LINC01116-202ENST00000339037 CHMP4AQ9BY43 222 aa20.17■□□□□ 0.82
LINC01116-202ENST00000339037 PDE8AO60658 829 aa20.16■□□□□ 0.82
LINC01116-202ENST00000339037 SULF1Q8IWU6 871 aa20.16■□□□□ 0.82
LINC01116-202ENST00000339037 C8orf58Q8NAV2 365 aa20.16■□□□□ 0.82
LINC01116-202ENST00000339037 CCDC85AQ96PX6 553 aaPredicted RBP20.16■□□□□ 0.82
LINC01116-202ENST00000339037 ZIC5Q96T25 663 aa20.16■□□□□ 0.82
LINC01116-202ENST00000339037 GGA3Q9NZ52 723 aa20.16■□□□□ 0.82
LINC01116-202ENST00000339037 FAM161AQ3B820 660 aa20.15■□□□□ 0.82
LINC01116-202ENST00000339037 CCDC30Q5VVM6 783 aa20.15■□□□□ 0.82
LINC01116-202ENST00000339037 RGMBQ6NW40 437 aa20.15■□□□□ 0.82
LINC01116-202ENST00000339037 METTL22Q9BUU2 404 aaPredicted RBP20.15■□□□□ 0.82
LINC01116-202ENST00000339037 FBXO3Q9UK99 471 aa20.15■□□□□ 0.82
LINC01116-202ENST00000339037 SCN9AQ15858 1988 aa20.15■□□□□ 0.82
LINC01116-202ENST00000339037 ZNF609O15014 1411 aa20.14■□□□□ 0.81
LINC01116-202ENST00000339037 XDHP47989 1333 aa20.14■□□□□ 0.81
LINC01116-202ENST00000339037 ANKRD18AQ8IVF6 992 aa20.14■□□□□ 0.81
LINC01116-202ENST00000339037 JARID2Q92833 1246 aaPredicted RBP20.14■□□□□ 0.81
LINC01116-202ENST00000339037 MCOLN1Q9GZU1 580 aa20.14■□□□□ 0.81
LINC01116-202ENST00000339037 FAM155AB1AL88 458 aaPredicted RBP20.13■□□□□ 0.81
LINC01116-202ENST00000339037 RSBN1LQ6PCB5 846 aaPredicted RBP20.13■□□□□ 0.81
LINC01116-202ENST00000339037 AGBL3Q8NEM8 1001 aa20.13■□□□□ 0.81
LINC01116-202ENST00000339037 CCDC102AQ96A19 550 aa20.13■□□□□ 0.81
LINC01116-202ENST00000339037 MAP3K2Q9Y2U5 619 aa20.13■□□□□ 0.81
LINC01116-202ENST00000339037 ASTN2O75129 1339 aaPredicted RBP20.12■□□□□ 0.81
LINC01116-202ENST00000339037 ZNF157P51786 506 aaPredicted RBP20.12■□□□□ 0.81
LINC01116-202ENST00000339037 ZNF280AP59817 542 aaPredicted RBP20.12■□□□□ 0.81
LINC01116-202ENST00000339037 CASP8AP2Q9UKL3 1982 aa20.12■□□□□ 0.81
LINC01116-202ENST00000339037 CTSWP56202 376 aa20.11■□□□□ 0.81
LINC01116-202ENST00000339037 CDC5LQ99459 802 aaKnown RBP20.11■□□□□ 0.81
LINC01116-202ENST00000339037 POLR2AP24928 1970 aaKnown RBP20.1■□□□□ 0.81
LINC01116-202ENST00000339037 USP17L8P0C7I0 530 aa20.1■□□□□ 0.81
LINC01116-202ENST00000339037 ATP2B4P23634 1241 aa20.1■□□□□ 0.81
LINC01116-202ENST00000339037 MLLT1Q03111 559 aaPredicted RBP20.1■□□□□ 0.81
LINC01116-202ENST00000339037 ANGEL2Q5VTE6 544 aaKnown RBP20.1■□□□□ 0.81
LINC01116-202ENST00000339037 KSR2Q6VAB6 950 aa20.1■□□□□ 0.81
LINC01116-202ENST00000339037 CDCA5Q96FF9 252 aa20.1■□□□□ 0.81
LINC01116-202ENST00000339037 SAGE1Q9NXZ1 904 aa20.1■□□□□ 0.81
LINC01116-202ENST00000339037 PI4KAP2A4QPH2 592 aa20.09■□□□□ 0.81
LINC01116-202ENST00000339037 IGKV5-2P06315 115 aa20.09■□□□□ 0.81
LINC01116-202ENST00000339037 KIF23Q02241 960 aaPredicted RBP20.09■□□□□ 0.81
LINC01116-202ENST00000339037 NEXNQ0ZGT2 675 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms