RNA–Protein interactions for RNA: ENST00000337908.4

MS4A4A-201, Transcript of membrane spanning 4-domains A4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MS4A4A, Length 1,604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-201ENST00000337908 TPTE2Q6XPS3 522 aa13.16□□□□□ -0.3
MS4A4A-201ENST00000337908 LRP5O75197 1615 aa13.16□□□□□ -0.3
MS4A4A-201ENST00000337908 ABCC12Q96J65 1359 aa13.15□□□□□ -0.3
MS4A4A-201ENST00000337908 SPEF2Q9C093 1822 aa13.15□□□□□ -0.3
MS4A4A-201ENST00000337908 SGSM2O43147 1006 aa13.15□□□□□ -0.3
MS4A4A-201ENST00000337908 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.15□□□□□ -0.3
MS4A4A-201ENST00000337908 SNX21Q969T3 373 aa13.15□□□□□ -0.3
MS4A4A-201ENST00000337908 XAGE2Q96GT9 111 aa13.15□□□□□ -0.3
MS4A4A-201ENST00000337908 TBC1D2Q9BYX2 928 aa13.15□□□□□ -0.3
MS4A4A-201ENST00000337908 RIPOR2Q9Y4F9 1068 aa13.15□□□□□ -0.3
MS4A4A-201ENST00000337908 RIC1Q4ADV7 1423 aa13.15□□□□□ -0.3
MS4A4A-201ENST00000337908 ST18O60284 1047 aa13.14□□□□□ -0.31
MS4A4A-201ENST00000337908 SLC5A1P13866 664 aa13.14□□□□□ -0.31
MS4A4A-201ENST00000337908 SSFA2P28290 1259 aa13.14□□□□□ -0.31
MS4A4A-201ENST00000337908 ANKRD18AQ8IVF6 992 aa13.14□□□□□ -0.31
MS4A4A-201ENST00000337908 NLRP3Q96P20 1036 aa13.14□□□□□ -0.31
MS4A4A-201ENST00000337908 BCL2L12Q9HB09 334 aa13.14□□□□□ -0.31
MS4A4A-201ENST00000337908 UBR3Q6ZT12 1888 aa13.14□□□□□ -0.31
MS4A4A-201ENST00000337908 CARMIL3Q8ND23 1372 aa13.14□□□□□ -0.31
MS4A4A-201ENST00000337908 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.13□□□□□ -0.31
MS4A4A-201ENST00000337908 PDE8BO95263 885 aa13.13□□□□□ -0.31
MS4A4A-201ENST00000337908 ANAPC15P60006 121 aa13.13□□□□□ -0.31
MS4A4A-201ENST00000337908 PUM3Q15397 648 aaKnown RBP13.13□□□□□ -0.31
MS4A4A-201ENST00000337908 TXNRD1Q16881 649 aa13.13□□□□□ -0.31
MS4A4A-201ENST00000337908 TICAM2Q86XR7 235 aa13.13□□□□□ -0.31
MS4A4A-201ENST00000337908 LRRC4BQ9NT99 713 aa13.13□□□□□ -0.31
MS4A4A-201ENST00000337908 PAG1Q9NWQ8 432 aa13.13□□□□□ -0.31
MS4A4A-201ENST00000337908 APBA3O96018 575 aa13.13□□□□□ -0.31
MS4A4A-201ENST00000337908 HSP90AA1P07900 732 aaKnown RBP13.13□□□□□ -0.31
MS4A4A-201ENST00000337908 KCNJ4P48050 445 aa13.13□□□□□ -0.31
MS4A4A-201ENST00000337908 SF3B3Q15393 1217 aaKnown RBP13.13□□□□□ -0.31
MS4A4A-201ENST00000337908 SLC10A5Q5PT55 438 aa13.13□□□□□ -0.31
MS4A4A-201ENST00000337908 SMIM5Q71RC9 77 aa13.13□□□□□ -0.31
MS4A4A-201ENST00000337908 IL27Q8NEV9 243 aa13.13□□□□□ -0.31
MS4A4A-201ENST00000337908 FBXO41Q8TF61 875 aa13.13□□□□□ -0.31
MS4A4A-201ENST00000337908 CASZ1Q86V15 1759 aa13.13□□□□□ -0.31
MS4A4A-201ENST00000337908 GOLIM4O00461 696 aa13.12□□□□□ -0.31
MS4A4A-201ENST00000337908 UQCRFS1P1P0C7P4 283 aa13.12□□□□□ -0.31
MS4A4A-201ENST00000337908 NMIQ13287 307 aaPredicted RBP13.12□□□□□ -0.31
MS4A4A-201ENST00000337908 KBTBD3Q8NAB2 608 aa13.12□□□□□ -0.31
MS4A4A-201ENST00000337908 LPIN2Q92539 896 aa13.12□□□□□ -0.31
MS4A4A-201ENST00000337908 KIF2CQ99661 725 aa13.12□□□□□ -0.31
MS4A4A-201ENST00000337908 SEC31BQ9NQW1 1179 aa13.12□□□□□ -0.31
MS4A4A-201ENST00000337908 ARAP2Q8WZ64 1704 aa13.12□□□□□ -0.31
MS4A4A-201ENST00000337908 PLSCR1O15162 318 aa13.11□□□□□ -0.31
MS4A4A-201ENST00000337908 ADORA1P30542 326 aa13.11□□□□□ -0.31
MS4A4A-201ENST00000337908 DDX46Q7L014 1031 aaKnown RBP13.11□□□□□ -0.31
MS4A4A-201ENST00000337908 FKBP4Q02790 459 aaKnown RBP eCLIP13.1□□□□□ -0.31
MS4A4A-201ENST00000337908 CNBD1Q8NA66 436 aa13.1□□□□□ -0.31
MS4A4A-201ENST00000337908 K7ELQ4 463 aaPredicted RBP13.1□□□□□ -0.31
MS4A4A-201ENST00000337908 HSPA4P34932 840 aa13.1□□□□□ -0.31
MS4A4A-201ENST00000337908 ST5P78524 1137 aa13.1□□□□□ -0.31
MS4A4A-201ENST00000337908 TTF1Q15361 905 aaPredicted RBP13.1□□□□□ -0.31
MS4A4A-201ENST00000337908 RNF20Q5VTR2 975 aa13.1□□□□□ -0.31
MS4A4A-201ENST00000337908 VGLL2Q8N8G2 317 aa13.1□□□□□ -0.31
MS4A4A-201ENST00000337908 EDC3Q96F86 508 aaKnown RBP13.1□□□□□ -0.31
MS4A4A-201ENST00000337908 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.1□□□□□ -0.31
MS4A4A-201ENST00000337908 LSG1Q9H089 658 aaKnown RBP13.1□□□□□ -0.31
MS4A4A-201ENST00000337908 TFCP2L1Q9NZI6 479 aa13.1□□□□□ -0.31
MS4A4A-201ENST00000337908 CCDC171Q6TFL3 1326 aa13.09□□□□□ -0.31
MS4A4A-201ENST00000337908 ZFYP08048 801 aaPredicted RBP13.09□□□□□ -0.31
MS4A4A-201ENST00000337908 ZKSCAN1P17029 563 aaPredicted RBP13.09□□□□□ -0.31
MS4A4A-201ENST00000337908 MCM2P49736 904 aa13.09□□□□□ -0.31
MS4A4A-201ENST00000337908 NFIXQ14938 502 aa13.09□□□□□ -0.31
MS4A4A-201ENST00000337908 ZSCAN25Q6NSZ9 544 aa13.09□□□□□ -0.31
MS4A4A-201ENST00000337908 FLAD1Q8NFF5 587 aa13.09□□□□□ -0.31
MS4A4A-201ENST00000337908 HELBQ8NG08 1087 aaPredicted RBP13.09□□□□□ -0.31
MS4A4A-201ENST00000337908 ZNF512BQ96KM6 892 aaPredicted RBP13.09□□□□□ -0.31
MS4A4A-201ENST00000337908 FAM227BQ96M60 508 aa13.09□□□□□ -0.31
MS4A4A-201ENST00000337908 A0A0D9SFI3 127 aa13.08□□□□□ -0.32
MS4A4A-201ENST00000337908 CHRNDQ07001 517 aa13.08□□□□□ -0.32
MS4A4A-201ENST00000337908 MCMDC2Q4G0Z9 681 aa13.08□□□□□ -0.32
MS4A4A-201ENST00000337908 AMIGO3Q86WK7 504 aa13.08□□□□□ -0.32
MS4A4A-201ENST00000337908 SLKQ9H2G2 1235 aaPredicted RBP13.08□□□□□ -0.32
MS4A4A-201ENST00000337908 HELLSQ9NRZ9 838 aa13.08□□□□□ -0.32
MS4A4A-201ENST00000337908 BSDC1Q9NW68 430 aaPredicted RBP13.08□□□□□ -0.32
MS4A4A-201ENST00000337908 NDUFB9Q9Y6M9 179 aa13.08□□□□□ -0.32
MS4A4A-201ENST00000337908 RGPD3A6NKT7 1758 aaPredicted RBP13.08□□□□□ -0.32
MS4A4A-201ENST00000337908 RGPD4Q7Z3J3 1758 aa13.08□□□□□ -0.32
MS4A4A-201ENST00000337908 RNF113AO15541 343 aaKnown RBP13.07□□□□□ -0.32
MS4A4A-201ENST00000337908 IL25Q9H293 177 aa13.07□□□□□ -0.32
MS4A4A-201ENST00000337908 SNRKQ9NRH2 765 aa13.07□□□□□ -0.32
MS4A4A-201ENST00000337908 GNL3LQ9NVN8 582 aaKnown RBP13.07□□□□□ -0.32
MS4A4A-201ENST00000337908 MED23Q9ULK4 1368 aa13.07□□□□□ -0.32
MS4A4A-201ENST00000337908 TNS1Q9HBL0 1735 aaKnown RBP13.07□□□□□ -0.32
MS4A4A-201ENST00000337908 TAF5LO75529 589 aa13.06□□□□□ -0.32
MS4A4A-201ENST00000337908 GYS1P13807 737 aa13.06□□□□□ -0.32
MS4A4A-201ENST00000337908 FGFR2P21802 821 aa13.06□□□□□ -0.32
MS4A4A-201ENST00000337908 NEK4P51957 841 aa13.06□□□□□ -0.32
MS4A4A-201ENST00000337908 RPS8P62241 208 aaKnown RBP13.06□□□□□ -0.32
MS4A4A-201ENST00000337908 CCDC102BQ68D86 513 aa13.06□□□□□ -0.32
MS4A4A-201ENST00000337908 SPRYD3Q8NCJ5 442 aa13.06□□□□□ -0.32
MS4A4A-201ENST00000337908 RPGRQ92834 1020 aaKnown RBP13.06□□□□□ -0.32
MS4A4A-201ENST00000337908 ANKRD2Q9GZV1 360 aa13.06□□□□□ -0.32
MS4A4A-201ENST00000337908 ARID4AP29374 1257 aaPredicted RBP13.06□□□□□ -0.32
MS4A4A-201ENST00000337908 ZAP70P43403 619 aa13.06□□□□□ -0.32
MS4A4A-201ENST00000337908 PRPF40BQ6NWY9 871 aaKnown RBP13.06□□□□□ -0.32
MS4A4A-201ENST00000337908 C3orf67Q6ZVT6 689 aa13.06□□□□□ -0.32
MS4A4A-201ENST00000337908 RBM8AQ9Y5S9 174 aaKnown RBP13.06□□□□□ -0.32
MS4A4A-201ENST00000337908 MYH7P12883 1935 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms