RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 ANKRD2Q9GZV1 360 aa19.13■□□□□ 0.65
SEC13-201ENST00000337354 PODXL2Q9NZ53 605 aa19.13■□□□□ 0.65
SEC13-201ENST00000337354 TIAM2Q8IVF5 1701 aa19.13■□□□□ 0.65
SEC13-201ENST00000337354 FER1L6Q2WGJ9 1857 aa19.12■□□□□ 0.65
SEC13-201ENST00000337354 HMMRO75330 724 aa19.12■□□□□ 0.65
SEC13-201ENST00000337354 CIAO1O76071 339 aa19.12■□□□□ 0.65
SEC13-201ENST00000337354 PSMD1Q99460 953 aa19.12■□□□□ 0.65
SEC13-201ENST00000337354 NSFL1CQ9UNZ2 370 aaKnown RBP19.12■□□□□ 0.65
SEC13-201ENST00000337354 LTBP3Q9NS15 1303 aa19.11■□□□□ 0.65
SEC13-201ENST00000337354 EYA2O00167 538 aa19.11■□□□□ 0.65
SEC13-201ENST00000337354 OLFM4Q6UX06 510 aa19.11■□□□□ 0.65
SEC13-201ENST00000337354 DPP8Q6V1X1 898 aaPredicted RBP19.11■□□□□ 0.65
SEC13-201ENST00000337354 SUPT20HQ8NEM7 779 aa19.11■□□□□ 0.65
SEC13-201ENST00000337354 VPS33BQ9H267 617 aa19.11■□□□□ 0.65
SEC13-201ENST00000337354 ANKIB1Q9P2G1 1089 aa19.11■□□□□ 0.65
SEC13-201ENST00000337354 RIPOR2Q9Y4F9 1068 aa19.11■□□□□ 0.65
SEC13-201ENST00000337354 XDHP47989 1333 aa19.1■□□□□ 0.65
SEC13-201ENST00000337354 MROH5Q6ZUA9 1318 aa19.1■□□□□ 0.65
SEC13-201ENST00000337354 FKBP4Q02790 459 aaKnown RBP eCLIP19.1■□□□□ 0.65
SEC13-201ENST00000337354 KLHDC4Q8TBB5 520 aa19.1■□□□□ 0.65
SEC13-201ENST00000337354 RTFDC1Q9BY42 306 aaPredicted RBP19.1■□□□□ 0.65
SEC13-201ENST00000337354 TAOK3Q9H2K8 898 aa19.1■□□□□ 0.65
SEC13-201ENST00000337354 ATP2B4P23634 1241 aa19.09■□□□□ 0.65
SEC13-201ENST00000337354 IL15P40933 162 aaPredicted RBP19.09■□□□□ 0.65
SEC13-201ENST00000337354 GPSM2P81274 684 aa19.09■□□□□ 0.65
SEC13-201ENST00000337354 RASSF7Q02833 373 aa19.09■□□□□ 0.65
SEC13-201ENST00000337354 CHRNDQ07001 517 aa19.09■□□□□ 0.65
SEC13-201ENST00000337354 PUS3Q9BZE2 481 aaKnown RBP19.09■□□□□ 0.65
SEC13-201ENST00000337354 LEMD3Q9Y2U8 911 aa19.09■□□□□ 0.65
SEC13-201ENST00000337354 NFKBIEO00221 500 aa19.08■□□□□ 0.65
SEC13-201ENST00000337354 LRRC24Q50LG9 513 aa19.08■□□□□ 0.65
SEC13-201ENST00000337354 EXOC6Q8TAG9 804 aa19.08■□□□□ 0.65
SEC13-201ENST00000337354 NOP58Q9Y2X3 529 aaKnown RBP19.08■□□□□ 0.65
SEC13-201ENST00000337354 G3BP1Q13283 466 aaKnown RBP eCLIP19.07■□□□□ 0.642e-9■■■□□ 17.5
SEC13-201ENST00000337354 SIRT2Q8IXJ6 389 aa19.07■□□□□ 0.64
SEC13-201ENST00000337354 SNED1Q8TER0 1413 aa19.07■□□□□ 0.64
SEC13-201ENST00000337354 GGA1Q9UJY5 639 aa19.07■□□□□ 0.64
SEC13-201ENST00000337354 PA2G4Q9UQ80 394 aaKnown RBP19.07■□□□□ 0.64
SEC13-201ENST00000337354 SURF6O75683 361 aaKnown RBP19.06■□□□□ 0.64
SEC13-201ENST00000337354 HSP90AB4PQ58FF6 505 aa19.06■□□□□ 0.64
SEC13-201ENST00000337354 METTL24Q5JXM2 366 aa19.06■□□□□ 0.64
SEC13-201ENST00000337354 ATG9AQ7Z3C6 839 aa19.06■□□□□ 0.64
SEC13-201ENST00000337354 ZNF784Q8NCA9 323 aaPredicted RBP19.06■□□□□ 0.64
SEC13-201ENST00000337354 TBC1D16Q8TBP0 767 aa19.06■□□□□ 0.64
SEC13-201ENST00000337354 EYA3Q99504 573 aa19.06■□□□□ 0.64
SEC13-201ENST00000337354 PCDHB15Q9Y5E8 787 aa19.06■□□□□ 0.64
SEC13-201ENST00000337354 MYH3P11055 1940 aa19.06■□□□□ 0.64
SEC13-201ENST00000337354 DICER1Q9UPY3 1922 aaKnown RBP19.06■□□□□ 0.64
SEC13-201ENST00000337354 C6orf229H3BNL8 230 aa19.06■□□□□ 0.64
SEC13-201ENST00000337354 PDE8BO95263 885 aa19.06■□□□□ 0.64
SEC13-201ENST00000337354 LMNB1P20700 586 aa19.06■□□□□ 0.64
SEC13-201ENST00000337354 SIL1Q9H173 461 aa19.06■□□□□ 0.64
SEC13-201ENST00000337354 RNF181Q9P0P0 153 aa19.06■□□□□ 0.64
SEC13-201ENST00000337354 CEP126Q9P2H0 1117 aa19.06■□□□□ 0.64
SEC13-201ENST00000337354 POLLQ9UGP5 575 aa19.06■□□□□ 0.64
SEC13-201ENST00000337354 TAF1P21675 1872 aa19.06■□□□□ 0.64
SEC13-201ENST00000337354 IRX6P78412 446 aaPredicted RBP19.05■□□□□ 0.64
SEC13-201ENST00000337354 C9orf131Q5VYM1 1079 aa19.05■□□□□ 0.64
SEC13-201ENST00000337354 SLC51AQ86UW1 340 aa19.05■□□□□ 0.64
SEC13-201ENST00000337354 ZNF804BA4D1E1 1349 aa19.04■□□□□ 0.64
SEC13-201ENST00000337354 TAF5LO75529 589 aa19.04■□□□□ 0.64
SEC13-201ENST00000337354 UFL1O94874 794 aa19.04■□□□□ 0.64
SEC13-201ENST00000337354 KCNJ4P48050 445 aa19.04■□□□□ 0.64
SEC13-201ENST00000337354 UBE4AQ14139 1066 aa19.04■□□□□ 0.64
SEC13-201ENST00000337354 WASHC4Q2M389 1173 aa19.04■□□□□ 0.64
SEC13-201ENST00000337354 HELBQ8NG08 1087 aaPredicted RBP19.04■□□□□ 0.64
SEC13-201ENST00000337354 ZNF526Q8TF50 670 aaPredicted RBP19.04■□□□□ 0.64
SEC13-201ENST00000337354 ZC3H12CQ9C0D7 883 aaKnown RBP19.04■□□□□ 0.64
SEC13-201ENST00000337354 COL4A1P02462 1669 aa19.03■□□□□ 0.64
SEC13-201ENST00000337354 NEFLP07196 543 aa19.03■□□□□ 0.64
SEC13-201ENST00000337354 IARSP41252 1262 aaKnown RBP19.03■□□□□ 0.64
SEC13-201ENST00000337354 KIAA2012Q0VF49 1180 aa19.03■□□□□ 0.64
SEC13-201ENST00000337354 ERC1Q8IUD2 1116 aa19.03■□□□□ 0.64
SEC13-201ENST00000337354 VGLL2Q8N8G2 317 aa19.03■□□□□ 0.64
SEC13-201ENST00000337354 ZNF277Q9NRM2 450 aaPredicted RBP19.03■□□□□ 0.64
SEC13-201ENST00000337354 RAB11FIP3O75154 756 aa19.02■□□□□ 0.64
SEC13-201ENST00000337354 OS9Q13438 667 aaPredicted RBP19.02■□□□□ 0.64
SEC13-201ENST00000337354 C15orf52Q6ZUT6 534 aaKnown RBP19.02■□□□□ 0.64
SEC13-201ENST00000337354 AKAP2Q9Y2D5 859 aa19.02■□□□□ 0.64
SEC13-201ENST00000337354 HDAC1Q13547 482 aaPredicted RBP19.01■□□□□ 0.63
SEC13-201ENST00000337354 PUM3Q15397 648 aaKnown RBP19.01■□□□□ 0.63
SEC13-201ENST00000337354 JDP2Q8WYK2 163 aa19.01■□□□□ 0.63
SEC13-201ENST00000337354 DCTPP1Q9H773 170 aa19.01■□□□□ 0.63
SEC13-201ENST00000337354 SPEF2Q9C093 1822 aa19.01■□□□□ 0.63
SEC13-201ENST00000337354 PPIP5K2O43314 1243 aa19■□□□□ 0.63
SEC13-201ENST00000337354 LARGE2Q8N3Y3 721 aa19■□□□□ 0.63
SEC13-201ENST00000337354 LPIN2Q92539 896 aa19■□□□□ 0.63
SEC13-201ENST00000337354 RWDD1Q9H446 243 aaPredicted RBP19■□□□□ 0.63
SEC13-201ENST00000337354 LRRC37AA6NMS7 1700 aa18.99■□□□□ 0.63
SEC13-201ENST00000337354 SASH1O94885 1247 aa18.99■□□□□ 0.63
SEC13-201ENST00000337354 IFIT1P09914 478 aaKnown RBP18.99■□□□□ 0.63
SEC13-201ENST00000337354 FGFR2P21802 821 aa18.99■□□□□ 0.63
SEC13-201ENST00000337354 PRELPP51888 382 aa18.99■□□□□ 0.63
SEC13-201ENST00000337354 TFCP2Q12800 502 aa18.99■□□□□ 0.63
SEC13-201ENST00000337354 AOC3Q16853 763 aa18.99■□□□□ 0.63
SEC13-201ENST00000337354 GPR108Q9NPR9 543 aa18.99■□□□□ 0.63
SEC13-201ENST00000337354 EXOC6BQ9Y2D4 811 aa18.99■□□□□ 0.63
SEC13-201ENST00000337354 MED23Q9ULK4 1368 aa18.99■□□□□ 0.63
SEC13-201ENST00000337354 WTIPA6NIX2 430 aaPredicted RBP18.98■□□□□ 0.63
SEC13-201ENST00000337354 RIMBP2O15034 1052 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms