RNA–Protein interactions for RNA: ENST00000335387.9

RC3H2-201, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 1 (best) BASIC

Gene RC3H2, Length 3,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-201ENST00000335387 AP5Z1O43299 807 aa15.87■□□□□ 0.13
RC3H2-201ENST00000335387 PFKFB2O60825 505 aa15.87■□□□□ 0.13
RC3H2-201ENST00000335387 TFCP2Q12800 502 aa15.87■□□□□ 0.13
RC3H2-201ENST00000335387 ATG9AQ7Z3C6 839 aa15.87■□□□□ 0.13
RC3H2-201ENST00000335387 FAM200AQ8TCP9 573 aa15.87■□□□□ 0.13
RC3H2-201ENST00000335387 LRP5O75197 1615 aa15.87■□□□□ 0.13
RC3H2-201ENST00000335387 HMGN5P82970 282 aaKnown RBP15.86■□□□□ 0.13
RC3H2-201ENST00000335387 SLC39A6Q13433 755 aa15.86■□□□□ 0.13
RC3H2-201ENST00000335387 NAA16Q6N069 864 aaPredicted RBP15.86■□□□□ 0.13
RC3H2-201ENST00000335387 NEK1Q96PY6 1258 aa15.86■□□□□ 0.13
RC3H2-201ENST00000335387 LARP6Q9BRS8 491 aaKnown RBP15.86■□□□□ 0.13
RC3H2-201ENST00000335387 CLSTN2Q9H4D0 955 aa15.86■□□□□ 0.13
RC3H2-201ENST00000335387 FBXO3Q9UK99 471 aa15.86■□□□□ 0.13
RC3H2-201ENST00000335387 USP16Q9Y5T5 823 aa15.86■□□□□ 0.13
RC3H2-201ENST00000335387 LRP6O75581 1613 aa15.86■□□□□ 0.13
RC3H2-201ENST00000335387 EXOSC10Q01780 885 aaKnown RBP15.86■□□□□ 0.13
RC3H2-201ENST00000335387 LEO1Q8WVC0 666 aaPredicted RBP15.86■□□□□ 0.13
RC3H2-201ENST00000335387 MRVI1Q9Y6F6 885 aa15.86■□□□□ 0.13
RC3H2-201ENST00000335387 SPATA31A3Q5VYP0 1347 aa15.86■□□□□ 0.13
RC3H2-201ENST00000335387 PIP4K2BP78356 416 aa15.86■□□□□ 0.13
RC3H2-201ENST00000335387 MYRIPQ8NFW9 859 aa15.86■□□□□ 0.13
RC3H2-201ENST00000335387 MYH3P11055 1940 aa15.85■□□□□ 0.13
RC3H2-201ENST00000335387 AIMP1Q12904 312 aaKnown RBP15.85■□□□□ 0.13
RC3H2-201ENST00000335387 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.85■□□□□ 0.13
RC3H2-201ENST00000335387 ADD1P35611 737 aaKnown RBP15.85■□□□□ 0.13
RC3H2-201ENST00000335387 MAP3K11Q16584 847 aa15.85■□□□□ 0.13
RC3H2-201ENST00000335387 GIMAP6Q6P9H5 292 aa15.85■□□□□ 0.13
RC3H2-201ENST00000335387 R3HCC1Q9Y3T6 440 aaKnown RBP15.85■□□□□ 0.13
RC3H2-201ENST00000335387 PLCH1Q4KWH8 1693 aa15.85■□□□□ 0.13
RC3H2-201ENST00000335387 CYP21A2P08686 494 aa15.84■□□□□ 0.13
RC3H2-201ENST00000335387 ZMYM1Q5SVZ6 1142 aa15.84■□□□□ 0.13
RC3H2-201ENST00000335387 TDRD7Q8NHU6 1098 aaKnown RBP15.84■□□□□ 0.13
RC3H2-201ENST00000335387 KLHDC4Q8TBB5 520 aa15.84■□□□□ 0.13
RC3H2-201ENST00000335387 AKAP11Q9UKA4 1901 aa15.84■□□□□ 0.13
RC3H2-201ENST00000335387 ERVV-2B6SEH9 535 aa15.84■□□□□ 0.13
RC3H2-201ENST00000335387 CDC25BP30305 580 aa15.84■□□□□ 0.13
RC3H2-201ENST00000335387 NOLC1Q14978 699 aaKnown RBP eCLIP15.84■□□□□ 0.135e-125■■■■■ 194
RC3H2-201ENST00000335387 KIAA1524Q8TCG1 905 aa15.84■□□□□ 0.13
RC3H2-201ENST00000335387 NUP62CLQ9H1M0 184 aa15.84■□□□□ 0.13
RC3H2-201ENST00000335387 ECM29Q5VYK3 1845 aa15.84■□□□□ 0.13
RC3H2-201ENST00000335387 ATF3P18847 181 aa15.83■□□□□ 0.13
RC3H2-201ENST00000335387 COL5A2P05997 1499 aaPredicted RBP15.83■□□□□ 0.12
RC3H2-201ENST00000335387 DOCK2Q92608 1830 aa15.83■□□□□ 0.12
RC3H2-201ENST00000335387 VPS37CA5D8V6 355 aaPredicted RBP15.83■□□□□ 0.12
RC3H2-201ENST00000335387 KCNJ4P48050 445 aa15.83■□□□□ 0.12
RC3H2-201ENST00000335387 SIL1Q9H173 461 aa15.83■□□□□ 0.12
RC3H2-201ENST00000335387 CICQ96RK0 1608 aaPredicted RBP15.83■□□□□ 0.12
RC3H2-201ENST00000335387 UQCRHLA0A096LP55 91 aa15.83■□□□□ 0.12
RC3H2-201ENST00000335387 UQCRHP07919 91 aa15.83■□□□□ 0.12
RC3H2-201ENST00000335387 MYL6BP14649 208 aa15.83■□□□□ 0.12
RC3H2-201ENST00000335387 LIG1P18858 919 aa15.83■□□□□ 0.12
RC3H2-201ENST00000335387 FOXD4L6Q3SYB3 417 aaPredicted RBP15.83■□□□□ 0.12
RC3H2-201ENST00000335387 FOXD4L3Q6VB84 417 aaPredicted RBP15.83■□□□□ 0.12
RC3H2-201ENST00000335387 PLA2G4DQ86XP0 818 aa15.83■□□□□ 0.12
RC3H2-201ENST00000335387 TTC5Q8N0Z6 440 aa15.83■□□□□ 0.12
RC3H2-201ENST00000335387 CHMP4CQ96CF2 233 aa15.83■□□□□ 0.12
RC3H2-201ENST00000335387 WNK3Q9BYP7 1800 aa15.83■□□□□ 0.12
RC3H2-201ENST00000335387 ATRNO75882 1429 aa15.82■□□□□ 0.12
RC3H2-201ENST00000335387 ZBTB7CA1YPR0 619 aa15.82■□□□□ 0.12
RC3H2-201ENST00000335387 NBPF26B4DH59 902 aa15.82■□□□□ 0.12
RC3H2-201ENST00000335387 IL15P40933 162 aaPredicted RBP15.82■□□□□ 0.12
RC3H2-201ENST00000335387 TYRO3Q06418 890 aa15.82■□□□□ 0.12
RC3H2-201ENST00000335387 NBPF14Q5TI25 921 aa15.82■□□□□ 0.12
RC3H2-201ENST00000335387 NBPF10Q6P3W6 841 aaKnown RBP15.82■□□□□ 0.12
RC3H2-201ENST00000335387 NBPF15Q8N660 670 aa15.82■□□□□ 0.12
RC3H2-201ENST00000335387 DBNDD2Q9BQY9 259 aa15.82■□□□□ 0.12
RC3H2-201ENST00000335387 KCNF1Q9H3M0 494 aa15.82■□□□□ 0.12
RC3H2-201ENST00000335387 STOX1Q6ZVD7 989 aa15.82■□□□□ 0.12
RC3H2-201ENST00000335387 PGBD1Q96JS3 809 aa15.82■□□□□ 0.12
RC3H2-201ENST00000335387 DHX32Q7L7V1 743 aaKnown RBP15.81■□□□□ 0.12
RC3H2-201ENST00000335387 CCDC191Q8NCU4 936 aa15.81■□□□□ 0.12
RC3H2-201ENST00000335387 RCOR1Q9UKL0 485 aa15.81■□□□□ 0.12
RC3H2-201ENST00000335387 WDR19Q8NEZ3 1342 aa15.81■□□□□ 0.12
RC3H2-201ENST00000335387 PCDH11XQ9BZA7 1347 aa15.81■□□□□ 0.12
RC3H2-201ENST00000335387 PCDH11YQ9BZA8 1340 aa15.81■□□□□ 0.12
RC3H2-201ENST00000335387 ITGB4P16144 1822 aa15.81■□□□□ 0.12
RC3H2-201ENST00000335387 SARM1Q6SZW1 724 aa15.81■□□□□ 0.12
RC3H2-201ENST00000335387 UBE3BQ7Z3V4 1068 aa15.81■□□□□ 0.12
RC3H2-201ENST00000335387 ZNF274Q96GC6 653 aaPredicted RBP15.81■□□□□ 0.12
RC3H2-201ENST00000335387 PLA2G12BQ9BX93 195 aa15.81■□□□□ 0.12
RC3H2-201ENST00000335387 NLRP2Q9NX02 1062 aa15.81■□□□□ 0.12
RC3H2-201ENST00000335387 A0A087WZG4 1122 aa15.81■□□□□ 0.12
RC3H2-201ENST00000335387 SCRN1Q12765 414 aa15.81■□□□□ 0.12
RC3H2-201ENST00000335387 Q6ZUG5 572 aa15.81■□□□□ 0.12
RC3H2-201ENST00000335387 NSUN7Q8NE18 718 aaKnown RBP15.81■□□□□ 0.12
RC3H2-201ENST00000335387 SPATA32Q96LK8 384 aa15.81■□□□□ 0.12
RC3H2-201ENST00000335387 PTMAP06454 111 aaKnown RBP15.8■□□□□ 0.12
RC3H2-201ENST00000335387 TRIM28Q13263 835 aaKnown RBP15.8■□□□□ 0.12
RC3H2-201ENST00000335387 CFAP45Q9UL16 551 aa15.8■□□□□ 0.12
RC3H2-201ENST00000335387 CTDNEP1O95476 244 aa15.8■□□□□ 0.12
RC3H2-201ENST00000335387 ZC3H6P61129 1189 aaKnown RBP15.8■□□□□ 0.12
RC3H2-201ENST00000335387 GLIPR1L2Q4G1C9 344 aa15.8■□□□□ 0.12
RC3H2-201ENST00000335387 EDC3Q96F86 508 aaKnown RBP15.8■□□□□ 0.12
RC3H2-201ENST00000335387 TIAM2Q8IVF5 1701 aa15.8■□□□□ 0.12
RC3H2-201ENST00000335387 RREB1Q92766 1687 aa15.79■□□□□ 0.12
RC3H2-201ENST00000335387 PAG1Q9NWQ8 432 aa15.79■□□□□ 0.12
RC3H2-201ENST00000335387 WDR17Q8IZU2 1322 aa15.79■□□□□ 0.12
RC3H2-201ENST00000335387 CWC25Q9NXE8 425 aaPredicted RBP15.79■□□□□ 0.12
RC3H2-201ENST00000335387 GOLGA6L6A8MZA4 724 aa15.79■□□□□ 0.12
RC3H2-201ENST00000335387 CTAGE5O15320 804 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms