RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 GIMAP6Q6P9H5 292 aa21.01■□□□□ 0.95
LRCH3-201ENST00000334859 GTF3C6Q969F1 213 aa21.01■□□□□ 0.95
LRCH3-201ENST00000334859 SLAIN2Q9P270 581 aa21.01■□□□□ 0.95
LRCH3-201ENST00000334859 TTC6Q86TZ1 520 aa21■□□□□ 0.95
LRCH3-201ENST00000334859 LRRC2Q9BYS8 371 aa21■□□□□ 0.95
LRCH3-201ENST00000334859 EIF2AK3Q9NZJ5 1116 aaKnown RBP21■□□□□ 0.95
LRCH3-201ENST00000334859 A0A1B0GUL7 405 aa20.99■□□□□ 0.95
LRCH3-201ENST00000334859 JAK2O60674 1132 aa20.99■□□□□ 0.95
LRCH3-201ENST00000334859 TMOD3Q9NYL9 352 aa20.99■□□□□ 0.95
LRCH3-201ENST00000334859 ABCA3Q99758 1704 aa20.99■□□□□ 0.95
LRCH3-201ENST00000334859 IFIT1P09914 478 aaKnown RBP20.99■□□□□ 0.95
LRCH3-201ENST00000334859 USP25Q9UHP3 1055 aa20.99■□□□□ 0.95
LRCH3-201ENST00000334859 BRF1Q92994 677 aa20.98■□□□□ 0.95
LRCH3-201ENST00000334859 PUS3Q9BZE2 481 aaKnown RBP20.98■□□□□ 0.95
LRCH3-201ENST00000334859 HELLSQ9NRZ9 838 aa20.98■□□□□ 0.95
LRCH3-201ENST00000334859 UVSSAQ2YD98 709 aa20.98■□□□□ 0.95
LRCH3-201ENST00000334859 CIAO1O76071 339 aa20.97■□□□□ 0.95
LRCH3-201ENST00000334859 CCDC57Q2TAC2 916 aa20.97■□□□□ 0.95
LRCH3-201ENST00000334859 STOX1Q6ZVD7 989 aa20.97■□□□□ 0.95
LRCH3-201ENST00000334859 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.97■□□□□ 0.95
LRCH3-201ENST00000334859 TOGARAM1Q9Y4F4 1720 aa20.96■□□□□ 0.95
LRCH3-201ENST00000334859 ELP1O95163 1332 aa20.96■□□□□ 0.95
LRCH3-201ENST00000334859 ZNF500O60304 480 aaPredicted RBP20.96■□□□□ 0.95
LRCH3-201ENST00000334859 OFD1O75665 1012 aa20.96■□□□□ 0.95
LRCH3-201ENST00000334859 ZMYM1Q5SVZ6 1142 aa20.96■□□□□ 0.95
LRCH3-201ENST00000334859 DDX11Q96FC9 970 aa20.96■□□□□ 0.95
LRCH3-201ENST00000334859 CCDC85AQ96PX6 553 aaPredicted RBP20.96■□□□□ 0.95
LRCH3-201ENST00000334859 CEP126Q9P2H0 1117 aa20.96■□□□□ 0.95
LRCH3-201ENST00000334859 HMGB1P09429 215 aaKnown RBP20.95■□□□□ 0.95
LRCH3-201ENST00000334859 MCM5P33992 734 aa20.95■□□□□ 0.95
LRCH3-201ENST00000334859 GORABQ5T7V8 394 aa20.95■□□□□ 0.95
LRCH3-201ENST00000334859 SPATA32Q96LK8 384 aa20.95■□□□□ 0.95
LRCH3-201ENST00000334859 ISCA1Q9BUE6 129 aa20.95■□□□□ 0.95
LRCH3-201ENST00000334859 DSCC1Q9BVC3 393 aa20.95■□□□□ 0.95
LRCH3-201ENST00000334859 SCAND2PQ9GZW5 306 aaPredicted RBP20.95■□□□□ 0.95
LRCH3-201ENST00000334859 ATG3Q9NT62 314 aa20.95■□□□□ 0.95
LRCH3-201ENST00000334859 TFIP11Q9UBB9 837 aaKnown RBP20.95■□□□□ 0.95
LRCH3-201ENST00000334859 GOLGA6L4A6NEF3 574 aa20.95■□□□□ 0.94
LRCH3-201ENST00000334859 H3BQV1 296 aa20.95■□□□□ 0.94
LRCH3-201ENST00000334859 IFFO2Q5TF58 517 aa20.95■□□□□ 0.94
LRCH3-201ENST00000334859 KIF6Q6ZMV9 814 aa20.95■□□□□ 0.94
LRCH3-201ENST00000334859 MAST3O60307 1309 aa20.95■□□□□ 0.94
LRCH3-201ENST00000334859 FKBP4Q02790 459 aaKnown RBP eCLIP20.94■□□□□ 0.94
LRCH3-201ENST00000334859 TCIRG1Q13488 830 aa20.94■□□□□ 0.94
LRCH3-201ENST00000334859 LAMA4Q16363 1823 aa20.94■□□□□ 0.94
LRCH3-201ENST00000334859 RNF113AO15541 343 aaKnown RBP20.94■□□□□ 0.94
LRCH3-201ENST00000334859 TAF7LQ5H9L4 462 aa20.94■□□□□ 0.94
LRCH3-201ENST00000334859 DHX32Q7L7V1 743 aaKnown RBP20.94■□□□□ 0.94
LRCH3-201ENST00000334859 FUCA2Q9BTY2 467 aa20.94■□□□□ 0.94
LRCH3-201ENST00000334859 HSPD1P10809 573 aaKnown RBP20.93■□□□□ 0.94
LRCH3-201ENST00000334859 SCRN1Q12765 414 aa20.93■□□□□ 0.94
LRCH3-201ENST00000334859 DNAJC10Q8IXB1 793 aa20.93■□□□□ 0.94
LRCH3-201ENST00000334859 ZNF335Q9H4Z2 1342 aaPredicted RBP20.93■□□□□ 0.94
LRCH3-201ENST00000334859 ADCY5O95622 1261 aa20.93■□□□□ 0.94
LRCH3-201ENST00000334859 LIG1P18858 919 aa20.93■□□□□ 0.94
LRCH3-201ENST00000334859 PLCB2Q00722 1185 aa20.93■□□□□ 0.94
LRCH3-201ENST00000334859 TTC39AQ5SRH9 613 aa20.93■□□□□ 0.94
LRCH3-201ENST00000334859 FAM89AQ96GI7 184 aa20.93■□□□□ 0.94
LRCH3-201ENST00000334859 NUP62CLQ9H1M0 184 aa20.93■□□□□ 0.94
LRCH3-201ENST00000334859 ASAP1Q9ULH1 1129 aa20.93■□□□□ 0.94
LRCH3-201ENST00000334859 MPNDQ8N594 471 aa20.92■□□□□ 0.94
LRCH3-201ENST00000334859 LEO1Q8WVC0 666 aaPredicted RBP20.92■□□□□ 0.94
LRCH3-201ENST00000334859 NAP1L2Q9ULW6 460 aaPredicted RBP20.92■□□□□ 0.94
LRCH3-201ENST00000334859 SPEF2Q9C093 1822 aa20.92■□□□□ 0.94
LRCH3-201ENST00000334859 A0A0G2JLW4 131 aa20.92■□□□□ 0.94
LRCH3-201ENST00000334859 CCDC192P0DO97 292 aa20.92■□□□□ 0.94
LRCH3-201ENST00000334859 ADORA1P30542 326 aa20.92■□□□□ 0.94
LRCH3-201ENST00000334859 APOBRQ0VD83 1088 aa20.92■□□□□ 0.94
LRCH3-201ENST00000334859 CAMK4Q16566 473 aa20.92■□□□□ 0.94
LRCH3-201ENST00000334859 CCDC158Q5M9N0 1113 aa20.92■□□□□ 0.94
LRCH3-201ENST00000334859 M0R2C6 588 aa20.91■□□□□ 0.94
LRCH3-201ENST00000334859 MAP3K11Q16584 847 aa20.91■□□□□ 0.94
LRCH3-201ENST00000334859 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.91■□□□□ 0.94
LRCH3-201ENST00000334859 E7EWF7 191 aa20.9■□□□□ 0.94
LRCH3-201ENST00000334859 PFKFB2O60825 505 aa20.9■□□□□ 0.94
LRCH3-201ENST00000334859 FOSBP53539 338 aa20.9■□□□□ 0.94
LRCH3-201ENST00000334859 TICAM2Q86XR7 235 aa20.9■□□□□ 0.94
LRCH3-201ENST00000334859 AKAP2Q9Y2D5 859 aa20.9■□□□□ 0.94
LRCH3-201ENST00000334859 KLHL34Q8N239 644 aa20.9■□□□□ 0.94
LRCH3-201ENST00000334859 PIGBQ92521 554 aa20.9■□□□□ 0.94
LRCH3-201ENST00000334859 XAGE2Q96GT9 111 aa20.9■□□□□ 0.94
LRCH3-201ENST00000334859 DACT1Q9NYF0 836 aa20.9■□□□□ 0.94
LRCH3-201ENST00000334859 STARD3NLO95772 234 aa20.89■□□□□ 0.94
LRCH3-201ENST00000334859 PCCAP05165 728 aaPredicted RBP20.89■□□□□ 0.94
LRCH3-201ENST00000334859 RESTQ13127 1097 aa20.89■□□□□ 0.94
LRCH3-201ENST00000334859 IFIT5Q13325 482 aaKnown RBP20.89■□□□□ 0.94
LRCH3-201ENST00000334859 WASHC4Q2M389 1173 aa20.89■□□□□ 0.94
LRCH3-201ENST00000334859 KDM4AO75164 1064 aa20.89■□□□□ 0.93
LRCH3-201ENST00000334859 BICD2Q8TD16 824 aa20.89■□□□□ 0.93
LRCH3-201ENST00000334859 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.89■□□□□ 0.93
LRCH3-201ENST00000334859 LLPHQ9BRT6 129 aaKnown RBP20.89■□□□□ 0.93
LRCH3-201ENST00000334859 TEX13AQ9BXU3 409 aaPredicted RBP20.89■□□□□ 0.93
LRCH3-201ENST00000334859 CCT2P78371 535 aaKnown RBP20.88■□□□□ 0.93
LRCH3-201ENST00000334859 LRRFIP1Q32MZ4 808 aaKnown RBP20.88■□□□□ 0.93
LRCH3-201ENST00000334859 TTLL5Q6EMB2 1281 aa20.88■□□□□ 0.93
LRCH3-201ENST00000334859 NSUN7Q8NE18 718 aaKnown RBP20.88■□□□□ 0.93
LRCH3-201ENST00000334859 SMARCC2Q8TAQ2 1214 aa20.88■□□□□ 0.93
LRCH3-201ENST00000334859 OSBP2Q969R2 916 aa20.88■□□□□ 0.93
LRCH3-201ENST00000334859 TNMDQ9H2S6 317 aa20.88■□□□□ 0.93
LRCH3-201ENST00000334859 PTPDC1A2A3K4 754 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms