RNA–Protein interactions for RNA: ENST00000334271.7

AP1S3-201, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 2

Gene AP1S3, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-201ENST00000334271 MICAL1Q8TDZ2 1067 aa12.73□□□□□ -0.37
AP1S3-201ENST00000334271 RPS6KL1Q9Y6S9 549 aa12.73□□□□□ -0.37
AP1S3-201ENST00000334271 COL24A1Q17RW2 1714 aa12.72□□□□□ -0.37
AP1S3-201ENST00000334271 ATP5J2-PTCD1G3V325 749 aa12.72□□□□□ -0.37
AP1S3-201ENST00000334271 CCDC96Q2M329 555 aa12.72□□□□□ -0.37
AP1S3-201ENST00000334271 NBPF20Q3BBV1 942 aa12.72□□□□□ -0.37
AP1S3-201ENST00000334271 APPP05067 770 aa12.72□□□□□ -0.37
AP1S3-201ENST00000334271 IL15P40933 162 aaPredicted RBP12.72□□□□□ -0.37
AP1S3-201ENST00000334271 PIP4K2AP48426 406 aaPredicted RBP12.72□□□□□ -0.37
AP1S3-201ENST00000334271 NARFQ9UHQ1 456 aa12.72□□□□□ -0.37
AP1S3-201ENST00000334271 CCNL1Q9UK58 526 aaPredicted RBP12.72□□□□□ -0.37
AP1S3-201ENST00000334271 PLSCR1O15162 318 aa12.71□□□□□ -0.37
AP1S3-201ENST00000334271 PDE8AO60658 829 aa12.71□□□□□ -0.37
AP1S3-201ENST00000334271 LINC00116Q8NCU8 138 aa12.71□□□□□ -0.37
AP1S3-201ENST00000334271 MTA3Q9BTC8 594 aa12.71□□□□□ -0.37
AP1S3-201ENST00000334271 RIC1Q4ADV7 1423 aa12.71□□□□□ -0.38
AP1S3-201ENST00000334271 GLRX3O76003 335 aaKnown RBP12.7□□□□□ -0.38
AP1S3-201ENST00000334271 RXRBP28702 533 aa12.7□□□□□ -0.38
AP1S3-201ENST00000334271 PTPN12Q05209 780 aaKnown RBP12.7□□□□□ -0.38
AP1S3-201ENST00000334271 NYXQ9GZU5 481 aa12.7□□□□□ -0.38
AP1S3-201ENST00000334271 RTCBQ9Y3I0 505 aaKnown RBP12.7□□□□□ -0.38
AP1S3-201ENST00000334271 SH3TC1Q8TE82 1336 aa12.7□□□□□ -0.38
AP1S3-201ENST00000334271 IRX3P78415 501 aaPredicted RBP12.7□□□□□ -0.38
AP1S3-201ENST00000334271 UTP14AQ9BVJ6 771 aaKnown RBP12.7□□□□□ -0.38
AP1S3-201ENST00000334271 RFX7Q2KHR2 1363 aa12.69□□□□□ -0.38
AP1S3-201ENST00000334271 TRAK2O60296 914 aa12.69□□□□□ -0.38
AP1S3-201ENST00000334271 MYCNP04198 464 aaPredicted RBP12.69□□□□□ -0.38
AP1S3-201ENST00000334271 MAPK8IP2Q13387 824 aaPredicted RBP12.69□□□□□ -0.38
AP1S3-201ENST00000334271 LMBR1LQ6UX01 489 aa12.69□□□□□ -0.38
AP1S3-201ENST00000334271 LRP5O75197 1615 aa12.69□□□□□ -0.38
AP1S3-201ENST00000334271 SPEF2Q9C093 1822 aa12.69□□□□□ -0.38
AP1S3-201ENST00000334271 ABCC12Q96J65 1359 aa12.69□□□□□ -0.38
AP1S3-201ENST00000334271 ERCC3P19447 782 aa12.69□□□□□ -0.38
AP1S3-201ENST00000334271 HLFQ16534 295 aa12.69□□□□□ -0.38
AP1S3-201ENST00000334271 CCDC57Q2TAC2 916 aa12.69□□□□□ -0.38
AP1S3-201ENST00000334271 EPHA10Q5JZY3 1008 aa12.69□□□□□ -0.38
AP1S3-201ENST00000334271 AKAP2Q9Y2D5 859 aa12.69□□□□□ -0.38
AP1S3-201ENST00000334271 IFIT2P09913 472 aaKnown RBP12.68□□□□□ -0.38
AP1S3-201ENST00000334271 SLC10A5Q5PT55 438 aa12.68□□□□□ -0.38
AP1S3-201ENST00000334271 SKAP1Q86WV1 359 aa12.68□□□□□ -0.38
AP1S3-201ENST00000334271 ECHDC1Q9NTX5 307 aa12.68□□□□□ -0.38
AP1S3-201ENST00000334271 TRMT112Q9UI30 125 aaKnown RBP12.68□□□□□ -0.38
AP1S3-201ENST00000334271 UBR3Q6ZT12 1888 aa12.68□□□□□ -0.38
AP1S3-201ENST00000334271 EYA2O00167 538 aa12.68□□□□□ -0.38
AP1S3-201ENST00000334271 HIP1O00291 1037 aa12.68□□□□□ -0.38
AP1S3-201ENST00000334271 SSFA2P28290 1259 aa12.68□□□□□ -0.38
AP1S3-201ENST00000334271 CTSWP56202 376 aa12.68□□□□□ -0.38
AP1S3-201ENST00000334271 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.68□□□□□ -0.38
AP1S3-201ENST00000334271 ANP32BQ92688 251 aaKnown RBP12.68□□□□□ -0.38
AP1S3-201ENST00000334271 C4AP0C0L4 1744 aa12.67□□□□□ -0.38
AP1S3-201ENST00000334271 DDX60Q8IY21 1712 aaKnown RBP12.67□□□□□ -0.38
AP1S3-201ENST00000334271 IRS4O14654 1257 aaPredicted RBP12.67□□□□□ -0.38
AP1S3-201ENST00000334271 SASH1O94885 1247 aa12.67□□□□□ -0.38
AP1S3-201ENST00000334271 GSPT1P15170 499 aaKnown RBP12.67□□□□□ -0.38
AP1S3-201ENST00000334271 PSEN1P49768 467 aa12.67□□□□□ -0.38
AP1S3-201ENST00000334271 IFIT5Q13325 482 aaKnown RBP12.67□□□□□ -0.38
AP1S3-201ENST00000334271 CEP120Q8N960 986 aa12.67□□□□□ -0.38
AP1S3-201ENST00000334271 FLAD1Q8NFF5 587 aa12.67□□□□□ -0.38
AP1S3-201ENST00000334271 TBC1D2BQ9UPU7 963 aa12.67□□□□□ -0.38
AP1S3-201ENST00000334271 ZNF330Q9Y3S2 320 aaPredicted RBP12.67□□□□□ -0.38
AP1S3-201ENST00000334271 AK9Q5TCS8 1911 aa12.67□□□□□ -0.38
AP1S3-201ENST00000334271 ZPR1O75312 459 aa12.66□□□□□ -0.38
AP1S3-201ENST00000334271 REC8O95072 547 aa12.66□□□□□ -0.38
AP1S3-201ENST00000334271 CNTROBQ8N137 903 aa12.66□□□□□ -0.38
AP1S3-201ENST00000334271 TBC1D32Q96NH3 1257 aa12.66□□□□□ -0.38
AP1S3-201ENST00000334271 ANKRD18BA2A2Z9 1011 aa12.66□□□□□ -0.38
AP1S3-201ENST00000334271 TTLL11Q8NHH1 800 aa12.66□□□□□ -0.38
AP1S3-201ENST00000334271 UBN2Q6ZU65 1347 aa12.65□□□□□ -0.38
AP1S3-201ENST00000334271 PPFIA4O75335 1185 aa12.65□□□□□ -0.38
AP1S3-201ENST00000334271 PEX14O75381 377 aa12.65□□□□□ -0.38
AP1S3-201ENST00000334271 NTSR2O95665 410 aa12.65□□□□□ -0.38
AP1S3-201ENST00000334271 SDSP20132 328 aa12.65□□□□□ -0.38
AP1S3-201ENST00000334271 TRAPPC3LQ5T215 181 aa12.65□□□□□ -0.38
AP1S3-201ENST00000334271 C16orf71Q8IYS4 520 aaPredicted RBP12.65□□□□□ -0.38
AP1S3-201ENST00000334271 SDR16C5Q8N3Y7 309 aa12.65□□□□□ -0.38
AP1S3-201ENST00000334271 PI4K2BQ8TCG2 481 aa12.65□□□□□ -0.38
AP1S3-201ENST00000334271 QSER1Q2KHR3 1735 aa12.65□□□□□ -0.38
AP1S3-201ENST00000334271 TNS1Q9HBL0 1735 aaKnown RBP12.65□□□□□ -0.38
AP1S3-201ENST00000334271 CCDC152Q4G0S7 254 aa12.65□□□□□ -0.38
AP1S3-201ENST00000334271 TBC1D9Q6ZT07 1266 aa12.65□□□□□ -0.38
AP1S3-201ENST00000334271 NIP7Q9Y221 180 aaKnown RBP eCLIP12.65□□□□□ -0.38
AP1S3-201ENST00000334271 ATP5JP18859 108 aa12.64□□□□□ -0.39
AP1S3-201ENST00000334271 SF3B3Q15393 1217 aaKnown RBP12.64□□□□□ -0.39
AP1S3-201ENST00000334271 TNNI3KQ59H18 835 aa12.64□□□□□ -0.39
AP1S3-201ENST00000334271 KRBA2Q6ZNG9 492 aa12.64□□□□□ -0.39
AP1S3-201ENST00000334271 IPO9Q96P70 1041 aaKnown RBP12.64□□□□□ -0.39
AP1S3-201ENST00000334271 FPGT-TNNI3KV9GXZ4 949 aa12.64□□□□□ -0.39
AP1S3-201ENST00000334271 MROH5Q6ZUA9 1318 aa12.64□□□□□ -0.39
AP1S3-201ENST00000334271 GNPATO15228 680 aa12.64□□□□□ -0.39
AP1S3-201ENST00000334271 SUSD4Q5VX71 490 aa12.64□□□□□ -0.39
AP1S3-201ENST00000334271 ZNF662Q6ZS27 426 aa12.64□□□□□ -0.39
AP1S3-201ENST00000334271 ATG9AQ7Z3C6 839 aa12.64□□□□□ -0.39
AP1S3-201ENST00000334271 AACSQ86V21 672 aa12.64□□□□□ -0.39
AP1S3-201ENST00000334271 RUFY2Q8WXA3 655 aa12.64□□□□□ -0.39
AP1S3-201ENST00000334271 FAM89AQ96GI7 184 aa12.64□□□□□ -0.39
AP1S3-201ENST00000334271 ZNF512BQ96KM6 892 aaPredicted RBP12.64□□□□□ -0.39
AP1S3-201ENST00000334271 CEP126Q9P2H0 1117 aa12.64□□□□□ -0.39
AP1S3-201ENST00000334271 PA2G4Q9UQ80 394 aaKnown RBP12.64□□□□□ -0.39
AP1S3-201ENST00000334271 ARAP2Q8WZ64 1704 aa12.63□□□□□ -0.39
AP1S3-201ENST00000334271 EGFL6Q8IUX8 553 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms