RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 NLRP5P59047 1200 aa13.07□□□□□ -0.32
POLR1B-202ENST00000333990 RBM8AQ9Y5S9 174 aaKnown RBP13.07□□□□□ -0.32
POLR1B-202ENST00000333990 E9PCH4 1651 aa13.07□□□□□ -0.32
POLR1B-202ENST00000333990 MROH5Q6ZUA9 1318 aa13.07□□□□□ -0.32
POLR1B-202ENST00000333990 CEP57L1Q8IYX8 460 aa13.07□□□□□ -0.32
POLR1B-202ENST00000333990 LPIN2Q92539 896 aa13.07□□□□□ -0.32
POLR1B-202ENST00000333990 PLEKHF1Q96S99 279 aa13.07□□□□□ -0.32
POLR1B-202ENST00000333990 ZHX3Q9H4I2 956 aa13.07□□□□□ -0.32
POLR1B-202ENST00000333990 PTCH1Q13635 1447 aa13.07□□□□□ -0.32
POLR1B-202ENST00000333990 SETBP1Q9Y6X0 1596 aa13.07□□□□□ -0.32
POLR1B-202ENST00000333990 SSBP05455 408 aaKnown RBP eCLIP13.06□□□□□ -0.32
POLR1B-202ENST00000333990 PDE6BP35913 854 aa13.06□□□□□ -0.32
POLR1B-202ENST00000333990 TNNI2P48788 182 aa13.06□□□□□ -0.32
POLR1B-202ENST00000333990 WDR66Q8TBY9 1149 aa13.06□□□□□ -0.32
POLR1B-202ENST00000333990 ZC3H13Q5T200 1668 aaKnown RBP13.06□□□□□ -0.32
POLR1B-202ENST00000333990 TNS3Q68CZ2 1445 aa13.06□□□□□ -0.32
POLR1B-202ENST00000333990 NEURL1BA8MQ27 555 aa13.06□□□□□ -0.32
POLR1B-202ENST00000333990 TTC6Q86TZ1 520 aa13.06□□□□□ -0.32
POLR1B-202ENST00000333990 CCDC82Q8N4S0 544 aa13.06□□□□□ -0.32
POLR1B-202ENST00000333990 TSPY26PQ9H489 355 aa13.06□□□□□ -0.32
POLR1B-202ENST00000333990 RBM27Q9P2N5 1060 aaKnown RBP13.06□□□□□ -0.32
POLR1B-202ENST00000333990 TMEM266Q2M3C6 531 aa13.06□□□□□ -0.32
POLR1B-202ENST00000333990 MICU3Q86XE3 530 aa13.06□□□□□ -0.32
POLR1B-202ENST00000333990 ABCA6Q8N139 1617 aa13.06□□□□□ -0.32
POLR1B-202ENST00000333990 RIMBP2O15034 1052 aa13.06□□□□□ -0.32
POLR1B-202ENST00000333990 LMOD1P29536 600 aaPredicted RBP13.06□□□□□ -0.32
POLR1B-202ENST00000333990 TNNI3KQ59H18 835 aa13.06□□□□□ -0.32
POLR1B-202ENST00000333990 FPGT-TNNI3KV9GXZ4 949 aa13.06□□□□□ -0.32
POLR1B-202ENST00000333990 TRPM1Q7Z4N2 1603 aa13.05□□□□□ -0.32
POLR1B-202ENST00000333990 AOX1Q06278 1338 aa13.05□□□□□ -0.32
POLR1B-202ENST00000333990 WDR78Q5VTH9 848 aa13.05□□□□□ -0.32
POLR1B-202ENST00000333990 DPP8Q6V1X1 898 aaPredicted RBP13.05□□□□□ -0.32
POLR1B-202ENST00000333990 ORC3Q9UBD5 711 aaPredicted RBP13.05□□□□□ -0.32
POLR1B-202ENST00000333990 PAXIP1Q6ZW49 1069 aaPredicted RBP13.05□□□□□ -0.32
POLR1B-202ENST00000333990 FERMT3Q86UX7 667 aa13.05□□□□□ -0.32
POLR1B-202ENST00000333990 SUCLG2Q96I99 432 aa13.05□□□□□ -0.32
POLR1B-202ENST00000333990 TRIM5Q9C035 493 aa13.05□□□□□ -0.32
POLR1B-202ENST00000333990 FBXO3Q9UK99 471 aa13.05□□□□□ -0.32
POLR1B-202ENST00000333990 ZBTB43O43298 467 aa13.05□□□□□ -0.32
POLR1B-202ENST00000333990 SMC2O95347 1197 aa13.05□□□□□ -0.32
POLR1B-202ENST00000333990 RPS8P62241 208 aaKnown RBP13.05□□□□□ -0.32
POLR1B-202ENST00000333990 KDRP35968 1356 aa13.05□□□□□ -0.32
POLR1B-202ENST00000333990 MAP3K15Q6ZN16 1313 aa13.05□□□□□ -0.32
POLR1B-202ENST00000333990 KCNQ3O43525 872 aa13.04□□□□□ -0.32
POLR1B-202ENST00000333990 PCCAP05165 728 aaPredicted RBP13.04□□□□□ -0.32
POLR1B-202ENST00000333990 NBPF7P0C2Y1 421 aaPredicted RBP13.04□□□□□ -0.32
POLR1B-202ENST00000333990 CCT2P78371 535 aaKnown RBP13.04□□□□□ -0.32
POLR1B-202ENST00000333990 CT47A1Q5JQC4 288 aaPredicted RBP13.04□□□□□ -0.32
POLR1B-202ENST00000333990 IFIT1BQ5T764 474 aaKnown RBP13.04□□□□□ -0.32
POLR1B-202ENST00000333990 MAGEB6Q8N7X4 407 aa13.04□□□□□ -0.32
POLR1B-202ENST00000333990 SMARCE1Q969G3 411 aa13.04□□□□□ -0.32
POLR1B-202ENST00000333990 TBC1D32Q96NH3 1257 aa13.04□□□□□ -0.32
POLR1B-202ENST00000333990 MPHOSPH6Q99547 160 aaKnown RBP13.04□□□□□ -0.32
POLR1B-202ENST00000333990 CALM1P0DP23 149 aa13.04□□□□□ -0.32
POLR1B-202ENST00000333990 CALM2P0DP24 149 aa13.04□□□□□ -0.32
POLR1B-202ENST00000333990 CALM3P0DP25 149 aa13.04□□□□□ -0.32
POLR1B-202ENST00000333990 NASPP49321 788 aaPredicted RBP13.04□□□□□ -0.32
POLR1B-202ENST00000333990 TIMM10P62072 90 aa13.04□□□□□ -0.32
POLR1B-202ENST00000333990 NMIQ13287 307 aaPredicted RBP13.04□□□□□ -0.32
POLR1B-202ENST00000333990 HOMER1Q86YM7 354 aa13.04□□□□□ -0.32
POLR1B-202ENST00000333990 PLEKHM2Q8IWE5 1019 aa13.04□□□□□ -0.32
POLR1B-202ENST00000333990 CNKSR2Q8WXI2 1034 aa13.04□□□□□ -0.32
POLR1B-202ENST00000333990 NUP62CLQ9H1M0 184 aa13.04□□□□□ -0.32
POLR1B-202ENST00000333990 HELLSQ9NRZ9 838 aa13.04□□□□□ -0.32
POLR1B-202ENST00000333990 CCDC39Q9UFE4 941 aa13.04□□□□□ -0.32
POLR1B-202ENST00000333990 KIDINS220Q9ULH0 1771 aa13.04□□□□□ -0.32
POLR1B-202ENST00000333990 PPRC1Q5VV67 1664 aaKnown RBP13.04□□□□□ -0.32
POLR1B-202ENST00000333990 ZBTB38Q8NAP3 1195 aaPredicted RBP13.04□□□□□ -0.32
POLR1B-202ENST00000333990 TBC1D22AQ8WUA7 517 aa13.04□□□□□ -0.32
POLR1B-202ENST00000333990 BRF1Q92994 677 aa13.04□□□□□ -0.32
POLR1B-202ENST00000333990 MCM9Q9NXL9 1143 aa13.04□□□□□ -0.32
POLR1B-202ENST00000333990 USP31Q70CQ4 1352 aa13.03□□□□□ -0.32
POLR1B-202ENST00000333990 BAG4O95429 457 aaKnown RBP13.03□□□□□ -0.32
POLR1B-202ENST00000333990 C16orf71Q8IYS4 520 aaPredicted RBP13.03□□□□□ -0.32
POLR1B-202ENST00000333990 VSIG10Q8N0Z9 540 aa13.03□□□□□ -0.32
POLR1B-202ENST00000333990 ASAP1Q9ULH1 1129 aa13.03□□□□□ -0.32
POLR1B-202ENST00000333990 PTPRMP28827 1452 aa13.03□□□□□ -0.32
POLR1B-202ENST00000333990 KLF18A0A0U1RQI7 1052 aa13.03□□□□□ -0.32
POLR1B-202ENST00000333990 GIGYF2Q6Y7W6 1299 aaKnown RBP13.03□□□□□ -0.32
POLR1B-202ENST00000333990 SKAP1Q86WV1 359 aa13.03□□□□□ -0.32
POLR1B-202ENST00000333990 VEZTQ9HBM0 779 aa13.03□□□□□ -0.32
POLR1B-202ENST00000333990 CLEC11AQ9Y240 323 aa13.03□□□□□ -0.32
POLR1B-202ENST00000333990 PICALMQ13492 652 aa13.03□□□□□ -0.32
POLR1B-202ENST00000333990 RNF214Q8ND24 703 aa13.03□□□□□ -0.32
POLR1B-202ENST00000333990 CCDC148Q8NFR7 591 aa13.03□□□□□ -0.32
POLR1B-202ENST00000333990 NCAPD2Q15021 1401 aa13.02□□□□□ -0.32
POLR1B-202ENST00000333990 SEPT12Q8IYM1 358 aa13.02□□□□□ -0.32
POLR1B-202ENST00000333990 CCDC171Q6TFL3 1326 aa13.02□□□□□ -0.32
POLR1B-202ENST00000333990 MCM4P33991 863 aa13.02□□□□□ -0.32
POLR1B-202ENST00000333990 CRKLP46109 303 aaKnown RBP13.02□□□□□ -0.32
POLR1B-202ENST00000333990 XAGE2Q96GT9 111 aa13.02□□□□□ -0.32
POLR1B-202ENST00000333990 SETD1BQ9UPS6 1966 aaKnown RBP13.02□□□□□ -0.32
POLR1B-202ENST00000333990 ABCC4O15439 1325 aa13.02□□□□□ -0.33
POLR1B-202ENST00000333990 JCADQ9P266 1359 aa13.02□□□□□ -0.33
POLR1B-202ENST00000333990 CTSWP56202 376 aa13.02□□□□□ -0.33
POLR1B-202ENST00000333990 EIF6P56537 245 aaKnown RBP13.02□□□□□ -0.33
POLR1B-202ENST00000333990 LARGE2Q8N3Y3 721 aa13.02□□□□□ -0.33
POLR1B-202ENST00000333990 DBNDD2Q9BQY9 259 aa13.02□□□□□ -0.33
POLR1B-202ENST00000333990 CERKQ8TCT0 537 aa13.02□□□□□ -0.33
POLR1B-202ENST00000333990 MADDQ8WXG6 1647 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms