RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 SEPT11Q9NVA2 429 aaKnown RBP15.06■□□□□ 0
VSTM4-202ENST00000332853 BAG3O95817 575 aa15.05■□□□□ 0
VSTM4-202ENST00000332853 DBNDD2Q9BQY9 259 aa15.05■□□□□ 0
VSTM4-202ENST00000332853 STX8Q9UNK0 236 aa15.05■□□□□ 0
VSTM4-202ENST00000332853 MARCKSP29966 332 aaPredicted RBP15.05■□□□□ 0
VSTM4-202ENST00000332853 ZNF165P49910 485 aa15.05■□□□□ 0
VSTM4-202ENST00000332853 XRCC6P12956 609 aaKnown RBP eCLIP15.05■□□□□ -0
VSTM4-202ENST00000332853 TNNI3KQ59H18 835 aa15.05■□□□□ -0
VSTM4-202ENST00000332853 IFIT1BQ5T764 474 aaKnown RBP15.05■□□□□ -0
VSTM4-202ENST00000332853 NAA16Q6N069 864 aaPredicted RBP15.05■□□□□ -0
VSTM4-202ENST00000332853 FPGT-TNNI3KV9GXZ4 949 aa15.05■□□□□ -0
VSTM4-202ENST00000332853 EPB41L2O43491 1005 aaKnown RBP15.05■□□□□ -0
VSTM4-202ENST00000332853 TOM1O60784 492 aa15.05■□□□□ -0
VSTM4-202ENST00000332853 FAM135BQ49AJ0 1406 aa15.04■□□□□ -0
VSTM4-202ENST00000332853 CCDC171Q6TFL3 1326 aa15.04■□□□□ -0
VSTM4-202ENST00000332853 A0A1B0GUL7 405 aa15.04■□□□□ -0
VSTM4-202ENST00000332853 TOP1P11387 765 aaKnown RBP15.04■□□□□ -0
VSTM4-202ENST00000332853 ZNF496Q96IT1 587 aaPredicted RBP15.04■□□□□ -0
VSTM4-202ENST00000332853 SLF2Q8IX21 1173 aa15.04■□□□□ -0
VSTM4-202ENST00000332853 KRT23Q9C075 422 aa15.04■□□□□ -0
VSTM4-202ENST00000332853 PATL2C9JE40 543 aaKnown RBP15.04■□□□□ -0
VSTM4-202ENST00000332853 BCORL1Q5H9F3 1711 aa15.04■□□□□ -0
VSTM4-202ENST00000332853 TMC6Q7Z403 805 aa15.04■□□□□ -0
VSTM4-202ENST00000332853 PRIM1P49642 420 aaKnown RBP15.04■□□□□ -0
VSTM4-202ENST00000332853 SPTY2D1Q68D10 685 aaPredicted RBP15.04■□□□□ -0
VSTM4-202ENST00000332853 ITGA6P23229 1130 aa15.03■□□□□ -0
VSTM4-202ENST00000332853 RTN1Q16799 776 aa15.03■□□□□ -0
VSTM4-202ENST00000332853 ANO6Q4KMQ2 910 aa15.03■□□□□ -0
VSTM4-202ENST00000332853 HSP90AA4PQ58FG1 418 aa15.03■□□□□ -0
VSTM4-202ENST00000332853 BABAM1Q9NWV8 329 aa15.03■□□□□ -0
VSTM4-202ENST00000332853 DACT1Q9NYF0 836 aa15.03■□□□□ -0
VSTM4-202ENST00000332853 MAGEB6P1A0A0J9YX57 407 aa15.03■□□□□ -0
VSTM4-202ENST00000332853 RBM25P49756 843 aaKnown RBP15.03■□□□□ -0
VSTM4-202ENST00000332853 CLTCL1P53675 1640 aa15.03■□□□□ -0
VSTM4-202ENST00000332853 ABCC4O15439 1325 aa15.03■□□□□ -0
VSTM4-202ENST00000332853 KIAA1328Q86T90 577 aa15.03■□□□□ -0
VSTM4-202ENST00000332853 ZKSCAN3Q9BRR0 538 aa15.03■□□□□ -0
VSTM4-202ENST00000332853 UBA5Q9GZZ9 404 aa15.03■□□□□ -0
VSTM4-202ENST00000332853 PICALMQ13492 652 aa15.03■□□□□ -0
VSTM4-202ENST00000332853 MLH3Q9UHC1 1453 aa15.03■□□□□ -0
VSTM4-202ENST00000332853 TSPY3P0CV98 308 aa15.03■□□□□ -0
VSTM4-202ENST00000332853 TSPY8P0CW00 308 aa15.03■□□□□ -0
VSTM4-202ENST00000332853 KIF5BP33176 963 aa15.03■□□□□ -0
VSTM4-202ENST00000332853 CCDC181Q5TID7 509 aa15.03■□□□□ -0
VSTM4-202ENST00000332853 SMARCC1Q92922 1105 aaPredicted RBP15.03■□□□□ -0
VSTM4-202ENST00000332853 ADCY10Q96PN6 1610 aa15.03■□□□□ -0
VSTM4-202ENST00000332853 LDHCP07864 332 aa15.02■□□□□ -0
VSTM4-202ENST00000332853 PTPN14Q15678 1187 aa15.02■□□□□ -0
VSTM4-202ENST00000332853 MTERF4Q7Z6M4 381 aaKnown RBP15.02■□□□□ -0
VSTM4-202ENST00000332853 C16orf45Q96MC5 204 aaPredicted RBP15.02■□□□□ -0
VSTM4-202ENST00000332853 ROBO2Q9HCK4 1378 aa15.02■□□□□ -0
VSTM4-202ENST00000332853 IQGAP3Q86VI3 1631 aa15.02■□□□□ -0
VSTM4-202ENST00000332853 TRMT1LQ7Z2T5 733 aaKnown RBP15.02■□□□□ -0
VSTM4-202ENST00000332853 SNX14Q9Y5W7 946 aa15.02■□□□□ -0
VSTM4-202ENST00000332853 TET3O43151 1660 aa15.02□□□□□ -0.01
VSTM4-202ENST00000332853 LMTK3Q96Q04 1460 aa15.02□□□□□ -0.01
VSTM4-202ENST00000332853 TRMT2AQ8IZ69 625 aaKnown RBP15.02□□□□□ -0.01
VSTM4-202ENST00000332853 ESR2Q92731 530 aa15.02□□□□□ -0.01
VSTM4-202ENST00000332853 MAP7D2Q96T17 732 aa15.02□□□□□ -0.01
VSTM4-202ENST00000332853 PDCL3Q9H2J4 239 aa15.02□□□□□ -0.01
VSTM4-202ENST00000332853 GSPT1P15170 499 aaKnown RBP15.01□□□□□ -0.01
VSTM4-202ENST00000332853 ARHGAP29Q52LW3 1261 aa15.01□□□□□ -0.01
VSTM4-202ENST00000332853 SLC27A2O14975 620 aa15.01□□□□□ -0.01
VSTM4-202ENST00000332853 SYKP43405 635 aa15.01□□□□□ -0.01
VSTM4-202ENST00000332853 WWC3Q9ULE0 1092 aa15.01□□□□□ -0.01
VSTM4-202ENST00000332853 TRPM1Q7Z4N2 1603 aa15.01□□□□□ -0.01
VSTM4-202ENST00000332853 PTPDC1A2A3K4 754 aa15.01□□□□□ -0.01
VSTM4-202ENST00000332853 HOXB7P09629 217 aa15.01□□□□□ -0.01
VSTM4-202ENST00000332853 GCKRQ14397 625 aa15.01□□□□□ -0.01
VSTM4-202ENST00000332853 EYA2O00167 538 aa15.01□□□□□ -0.01
VSTM4-202ENST00000332853 AFMP43652 599 aa15.01□□□□□ -0.01
VSTM4-202ENST00000332853 ENOX2Q16206 610 aaKnown RBP15□□□□□ -0.01
VSTM4-202ENST00000332853 CNNM2Q9H8M5 875 aa15□□□□□ -0.01
VSTM4-202ENST00000332853 MATR3P43243 847 aaKnown RBP eCLIP15□□□□□ -0.01
VSTM4-202ENST00000332853 KIAA0232Q92628 1395 aa15□□□□□ -0.01
VSTM4-202ENST00000332853 DHX32Q7L7V1 743 aaKnown RBP15□□□□□ -0.01
VSTM4-202ENST00000332853 XAGE2Q96GT9 111 aa15□□□□□ -0.01
VSTM4-202ENST00000332853 RTCBQ9Y3I0 505 aaKnown RBP15□□□□□ -0.01
VSTM4-202ENST00000332853 CCDC24Q8N4L8 307 aa15□□□□□ -0.01
VSTM4-202ENST00000332853 ERCC4Q92889 916 aaPredicted RBP15□□□□□ -0.01
VSTM4-202ENST00000332853 CCDC102BQ68D86 513 aa15□□□□□ -0.01
VSTM4-202ENST00000332853 DNAJC10Q8IXB1 793 aa15□□□□□ -0.01
VSTM4-202ENST00000332853 EDC3Q96F86 508 aaKnown RBP15□□□□□ -0.01
VSTM4-202ENST00000332853 DNAJC25Q9H1X3 360 aa15□□□□□ -0.01
VSTM4-202ENST00000332853 TAF5LO75529 589 aa14.99□□□□□ -0.01
VSTM4-202ENST00000332853 TMEM266Q2M3C6 531 aa14.99□□□□□ -0.01
VSTM4-202ENST00000332853 SYT1P21579 422 aa14.99□□□□□ -0.01
VSTM4-202ENST00000332853 USP44Q9H0E7 712 aa14.99□□□□□ -0.01
VSTM4-202ENST00000332853 GNPATO15228 680 aa14.99□□□□□ -0.01
VSTM4-202ENST00000332853 HEATR3Q7Z4Q2 680 aa14.99□□□□□ -0.01
VSTM4-202ENST00000332853 NUP88Q99567 741 aaPredicted RBP14.99□□□□□ -0.01
VSTM4-202ENST00000332853 PRR36Q9H6K5 1346 aa14.99□□□□□ -0.01
VSTM4-202ENST00000332853 GSTO1P78417 241 aa14.99□□□□□ -0.01
VSTM4-202ENST00000332853 ABCC3O15438 1527 aa14.99□□□□□ -0.01
VSTM4-202ENST00000332853 RTL1A6NKG5 1358 aa14.98□□□□□ -0.01
VSTM4-202ENST00000332853 RIMBP2O15034 1052 aa14.98□□□□□ -0.01
VSTM4-202ENST00000332853 GIGYF1O75420 1035 aaPredicted RBP14.98□□□□□ -0.01
VSTM4-202ENST00000332853 MBD4O95243 580 aa14.98□□□□□ -0.01
VSTM4-202ENST00000332853 TNNT1P13805 278 aa14.98□□□□□ -0.01
VSTM4-202ENST00000332853 RPS6KB1P23443 525 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms