RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 H7C1W4 665 aa12.24□□□□□ -0.45
SYN3-201ENST00000332840 FZD9O00144 591 aa12.24□□□□□ -0.45
SYN3-201ENST00000332840 PPIP5K2O43314 1243 aa12.24□□□□□ -0.45
SYN3-201ENST00000332840 PTPRCP08575 1304 aa12.24□□□□□ -0.45
SYN3-201ENST00000332840 CTSWP56202 376 aa12.24□□□□□ -0.45
SYN3-201ENST00000332840 EIF6P56537 245 aaKnown RBP12.24□□□□□ -0.45
SYN3-201ENST00000332840 CWF19L2Q2TBE0 894 aaKnown RBP12.24□□□□□ -0.45
SYN3-201ENST00000332840 NIM1KQ8IY84 436 aa12.24□□□□□ -0.45
SYN3-201ENST00000332840 DZIP1LQ8IYY4 767 aaKnown RBP12.24□□□□□ -0.45
SYN3-201ENST00000332840 GPC2Q8N158 579 aa12.24□□□□□ -0.45
SYN3-201ENST00000332840 MRPL50Q8N5N7 158 aaKnown RBP12.24□□□□□ -0.45
SYN3-201ENST00000332840 RTL9Q8NET4 1388 aa12.24□□□□□ -0.45
SYN3-201ENST00000332840 L3MBTL3Q96JM7 780 aaPredicted RBP12.24□□□□□ -0.45
SYN3-201ENST00000332840 ALDH1L1O75891 902 aa12.23□□□□□ -0.45
SYN3-201ENST00000332840 KIAA2012Q0VF49 1180 aa12.23□□□□□ -0.45
SYN3-201ENST00000332840 ATF7IPQ6VMQ6 1270 aa12.23□□□□□ -0.45
SYN3-201ENST00000332840 UBE3BQ7Z3V4 1068 aa12.23□□□□□ -0.45
SYN3-201ENST00000332840 ANKRD18AQ8IVF6 992 aa12.23□□□□□ -0.45
SYN3-201ENST00000332840 PANK1Q8TE04 598 aa12.23□□□□□ -0.45
SYN3-201ENST00000332840 ARHGAP45Q92619 1136 aa12.23□□□□□ -0.45
SYN3-201ENST00000332840 CELF1Q92879 486 aaKnown RBP12.23□□□□□ -0.45
SYN3-201ENST00000332840 EYA3Q99504 573 aa12.23□□□□□ -0.45
SYN3-201ENST00000332840 PLA2G12BQ9BX93 195 aa12.23□□□□□ -0.45
SYN3-201ENST00000332840 NOB1Q9ULX3 412 aaKnown RBP12.23□□□□□ -0.45
SYN3-201ENST00000332840 FOXN1O15353 648 aa12.22□□□□□ -0.45
SYN3-201ENST00000332840 BEND3Q5T5X7 828 aa12.22□□□□□ -0.45
SYN3-201ENST00000332840 FTSJ3Q8IY81 847 aaKnown RBP12.22□□□□□ -0.45
SYN3-201ENST00000332840 NSFL1CQ9UNZ2 370 aaKnown RBP12.22□□□□□ -0.45
SYN3-201ENST00000332840 TRPM7Q96QT4 1865 aa12.22□□□□□ -0.45
SYN3-201ENST00000332840 CASP8AP2Q9UKL3 1982 aa12.21□□□□□ -0.45
SYN3-201ENST00000332840 DDNO94850 711 aaPredicted RBP12.21□□□□□ -0.45
SYN3-201ENST00000332840 TTLL11Q8NHH1 800 aa12.21□□□□□ -0.45
SYN3-201ENST00000332840 SRCIN1Q9C0H9 1055 aa12.21□□□□□ -0.45
SYN3-201ENST00000332840 PODXL2Q9NZ53 605 aa12.21□□□□□ -0.45
SYN3-201ENST00000332840 ZNRF3Q9ULT6 936 aa12.21□□□□□ -0.45
SYN3-201ENST00000332840 COG6Q9Y2V7 657 aa12.21□□□□□ -0.45
SYN3-201ENST00000332840 ZNF541Q9H0D2 1346 aa12.2□□□□□ -0.46
SYN3-201ENST00000332840 F6X3S4 739 aa12.2□□□□□ -0.46
SYN3-201ENST00000332840 TRIM27P14373 513 aa12.2□□□□□ -0.46
SYN3-201ENST00000332840 LMOD1P29536 600 aaPredicted RBP12.2□□□□□ -0.46
SYN3-201ENST00000332840 AOC3Q16853 763 aa12.2□□□□□ -0.46
SYN3-201ENST00000332840 WASHC4Q2M389 1173 aa12.2□□□□□ -0.46
SYN3-201ENST00000332840 PNMA8AQ86V59 439 aaPredicted RBP12.2□□□□□ -0.46
SYN3-201ENST00000332840 CLUAP1Q96AJ1 413 aa12.2□□□□□ -0.46
SYN3-201ENST00000332840 BSDC1Q9NW68 430 aaPredicted RBP12.2□□□□□ -0.46
SYN3-201ENST00000332840 C9orf78Q9NZ63 289 aaPredicted RBP12.2□□□□□ -0.46
SYN3-201ENST00000332840 ANKIB1Q9P2G1 1089 aa12.2□□□□□ -0.46
SYN3-201ENST00000332840 HACL1Q9UJ83 578 aa12.2□□□□□ -0.46
SYN3-201ENST00000332840 CACNA1FO60840 1977 aa12.19□□□□□ -0.46
SYN3-201ENST00000332840 XDHP47989 1333 aa12.19□□□□□ -0.46
SYN3-201ENST00000332840 C6orf229H3BNL8 230 aa12.19□□□□□ -0.46
SYN3-201ENST00000332840 GRM8O00222 908 aa12.19□□□□□ -0.46
SYN3-201ENST00000332840 RLBP1P12271 317 aa12.19□□□□□ -0.46
SYN3-201ENST00000332840 IGHMBP2P38935 993 aaKnown RBP12.19□□□□□ -0.46
SYN3-201ENST00000332840 CASP7P55210 303 aa12.19□□□□□ -0.46
SYN3-201ENST00000332840 MVPQ14764 893 aaKnown RBP12.19□□□□□ -0.46
SYN3-201ENST00000332840 TNIP1Q15025 636 aa12.19□□□□□ -0.46
SYN3-201ENST00000332840 CHADLQ6NUI6 762 aa12.19□□□□□ -0.46
SYN3-201ENST00000332840 SLC4A10Q6U841 1118 aa12.19□□□□□ -0.46
SYN3-201ENST00000332840 JARID2Q92833 1246 aaPredicted RBP12.19□□□□□ -0.46
SYN3-201ENST00000332840 API5Q9BZZ5 524 aaKnown RBP12.19□□□□□ -0.46
SYN3-201ENST00000332840 SEC31BQ9NQW1 1179 aa12.19□□□□□ -0.46
SYN3-201ENST00000332840 GGA1Q9UJY5 639 aa12.19□□□□□ -0.46
SYN3-201ENST00000332840 TNNQ9UQP3 1299 aa12.19□□□□□ -0.46
SYN3-201ENST00000332840 LAMB2P55268 1798 aa12.18□□□□□ -0.46
SYN3-201ENST00000332840 CSF1RP07333 972 aa12.18□□□□□ -0.46
SYN3-201ENST00000332840 GPSM2P81274 684 aa12.18□□□□□ -0.46
SYN3-201ENST00000332840 LDHDQ86WU2 507 aa12.18□□□□□ -0.46
SYN3-201ENST00000332840 CCDC85AQ96PX6 553 aaPredicted RBP12.18□□□□□ -0.46
SYN3-201ENST00000332840 MPHOSPH8Q99549 860 aa12.18□□□□□ -0.46
SYN3-201ENST00000332840 ZC3H12CQ9C0D7 883 aaKnown RBP12.18□□□□□ -0.46
SYN3-201ENST00000332840 CHMP4BQ9H444 224 aaKnown RBP12.18□□□□□ -0.46
SYN3-201ENST00000332840 GREM2Q9H772 168 aa12.18□□□□□ -0.46
SYN3-201ENST00000332840 DDX19BQ9UMR2 479 aa12.18□□□□□ -0.46
SYN3-201ENST00000332840 GJA3Q9Y6H8 435 aa12.18□□□□□ -0.46
SYN3-201ENST00000332840 DDX60Q8IY21 1712 aaKnown RBP12.17□□□□□ -0.46
SYN3-201ENST00000332840 ANKRD18BA2A2Z9 1011 aa12.17□□□□□ -0.46
SYN3-201ENST00000332840 UFL1O94874 794 aa12.17□□□□□ -0.46
SYN3-201ENST00000332840 ITGA6P23229 1130 aa12.17□□□□□ -0.46
SYN3-201ENST00000332840 ATP2B4P23634 1241 aa12.17□□□□□ -0.46
SYN3-201ENST00000332840 IFIT5Q13325 482 aaKnown RBP12.17□□□□□ -0.46
SYN3-201ENST00000332840 CIAPIN1Q6FI81 312 aa12.17□□□□□ -0.46
SYN3-201ENST00000332840 TBC1D16Q8TBP0 767 aa12.17□□□□□ -0.46
SYN3-201ENST00000332840 ANKRD2Q9GZV1 360 aa12.17□□□□□ -0.46
SYN3-201ENST00000332840 TAF1DQ9H5J8 278 aaPredicted RBP12.17□□□□□ -0.46
SYN3-201ENST00000332840 CREBZFQ9NS37 354 aa12.17□□□□□ -0.46
SYN3-201ENST00000332840 G3V3G9 751 aa12.16□□□□□ -0.46
SYN3-201ENST00000332840 EPHX2P34913 555 aa12.16□□□□□ -0.46
SYN3-201ENST00000332840 LBX1P52954 281 aa12.16□□□□□ -0.46
SYN3-201ENST00000332840 CXCL9Q07325 125 aa12.16□□□□□ -0.46
SYN3-201ENST00000332840 FAM161AQ3B820 660 aa12.16□□□□□ -0.46
SYN3-201ENST00000332840 EAPPQ56P03 285 aaPredicted RBP12.16□□□□□ -0.46
SYN3-201ENST00000332840 DCAF8Q5TAQ9 597 aa12.16□□□□□ -0.46
SYN3-201ENST00000332840 TMEM57Q8N5G2 664 aa12.16□□□□□ -0.46
SYN3-201ENST00000332840 POLLQ9UGP5 575 aa12.16□□□□□ -0.46
SYN3-201ENST00000332840 HDAC5Q9UQL6 1122 aa12.16□□□□□ -0.46
SYN3-201ENST00000332840 LRRC37AA6NMS7 1700 aa12.16□□□□□ -0.46
SYN3-201ENST00000332840 CNTNAP1P78357 1384 aa12.16□□□□□ -0.46
SYN3-201ENST00000332840 ADAMTSL1Q8N6G6 1762 aa12.15□□□□□ -0.46
SYN3-201ENST00000332840 VEGFBP49765 207 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms