RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 IRX6P78412 446 aaPredicted RBP32.37■■■□□ 2.77
SMDT1-201ENST00000331479 GPSM2P81274 684 aa32.37■■■□□ 2.77
SMDT1-201ENST00000331479 NSFL1CQ9UNZ2 370 aaKnown RBP32.36■■■□□ 2.77
SMDT1-201ENST00000331479 PA2G4Q9UQ80 394 aaKnown RBP32.36■■■□□ 2.77
SMDT1-201ENST00000331479 LRRC24Q50LG9 513 aa32.36■■■□□ 2.77
SMDT1-201ENST00000331479 MPNDQ8N594 471 aa32.36■■■□□ 2.77
SMDT1-201ENST00000331479 CNNM1Q9NRU3 951 aa32.36■■■□□ 2.77
SMDT1-201ENST00000331479 PRELPP51888 382 aa32.34■■■□□ 2.77
SMDT1-201ENST00000331479 POLA2Q14181 598 aa32.34■■■□□ 2.77
SMDT1-201ENST00000331479 LTBP1Q14766 1721 aa32.34■■■□□ 2.77
SMDT1-201ENST00000331479 DPP8Q6V1X1 898 aaPredicted RBP32.34■■■□□ 2.77
SMDT1-201ENST00000331479 TAOK3Q9H2K8 898 aa32.34■■■□□ 2.77
SMDT1-201ENST00000331479 RIPOR2Q9Y4F9 1068 aa32.34■■■□□ 2.77
SMDT1-201ENST00000331479 FKBP4Q02790 459 aaKnown RBP eCLIP32.33■■■□□ 2.77
SMDT1-201ENST00000331479 GRIPAP1Q4V328 841 aa32.33■■■□□ 2.77
SMDT1-201ENST00000331479 SSH3Q8TE77 659 aa32.33■■■□□ 2.77
SMDT1-201ENST00000331479 COPRSQ9NQ92 184 aa32.33■■■□□ 2.77
SMDT1-201ENST00000331479 DUOX1Q9NRD9 1551 aa32.33■■■□□ 2.77
SMDT1-201ENST00000331479 CHRNDQ07001 517 aa32.32■■■□□ 2.77
SMDT1-201ENST00000331479 SIRT2Q8IXJ6 389 aa32.32■■■□□ 2.77
SMDT1-201ENST00000331479 EXOC6Q8TAG9 804 aa32.32■■■□□ 2.77
SMDT1-201ENST00000331479 SIL1Q9H173 461 aa32.32■■■□□ 2.77
SMDT1-201ENST00000331479 ANKIB1Q9P2G1 1089 aa32.32■■■□□ 2.77
SMDT1-201ENST00000331479 PSMD1Q99460 953 aa32.32■■■□□ 2.76
SMDT1-201ENST00000331479 PODXL2Q9NZ53 605 aa32.32■■■□□ 2.76
SMDT1-201ENST00000331479 LTBP3Q9NS15 1303 aa32.31■■■□□ 2.76
SMDT1-201ENST00000331479 WTIPA6NIX2 430 aaPredicted RBP32.31■■■□□ 2.76
SMDT1-201ENST00000331479 HELBQ8NG08 1087 aaPredicted RBP32.31■■■□□ 2.76
SMDT1-201ENST00000331479 ZNF277Q9NRM2 450 aaPredicted RBP32.31■■■□□ 2.76
SMDT1-201ENST00000331479 POLLQ9UGP5 575 aa32.31■■■□□ 2.76
SMDT1-201ENST00000331479 EYA2O00167 538 aa32.3■■■□□ 2.76
SMDT1-201ENST00000331479 RPAP2Q8IXW5 612 aaPredicted RBP32.3■■■□□ 2.76
SMDT1-201ENST00000331479 RTFDC1Q9BY42 306 aaPredicted RBP32.3■■■□□ 2.76
SMDT1-201ENST00000331479 XDHP47989 1333 aa32.3■■■□□ 2.76
SMDT1-201ENST00000331479 ATG9AQ7Z3C6 839 aa32.29■■■□□ 2.76
SMDT1-201ENST00000331479 A0A1B0GUL6 1792 aa32.29■■■□□ 2.76
SMDT1-201ENST00000331479 SBF1O95248 1867 aa32.29■■■□□ 2.76
SMDT1-201ENST00000331479 TAF5LO75529 589 aa32.28■■■□□ 2.76
SMDT1-201ENST00000331479 TBC1D16Q8TBP0 767 aa32.28■■■□□ 2.76
SMDT1-201ENST00000331479 GPR101Q96P66 508 aaPredicted RBP32.28■■■□□ 2.76
SMDT1-201ENST00000331479 ANKRD2Q9GZV1 360 aa32.28■■■□□ 2.76
SMDT1-201ENST00000331479 PCDHB15Q9Y5E8 787 aa32.28■■■□□ 2.76
SMDT1-201ENST00000331479 GGA1Q9UJY5 639 aa32.27■■■□□ 2.76
SMDT1-201ENST00000331479 CCDC88AQ3V6T2 1871 aa32.26■■■□□ 2.76
SMDT1-201ENST00000331479 C6orf229H3BNL8 230 aa32.26■■■□□ 2.75
SMDT1-201ENST00000331479 SNAP23O00161 211 aa32.26■■■□□ 2.75
SMDT1-201ENST00000331479 CIAO1O76071 339 aa32.26■■■□□ 2.75
SMDT1-201ENST00000331479 UFL1O94874 794 aa32.26■■■□□ 2.75
SMDT1-201ENST00000331479 FBXO3Q9UK99 471 aa32.25■■■□□ 2.75
SMDT1-201ENST00000331479 MROH5Q6ZUA9 1318 aa32.25■■■□□ 2.75
SMDT1-201ENST00000331479 LMNB1P20700 586 aa32.24■■■□□ 2.75
SMDT1-201ENST00000331479 METTL24Q5JXM2 366 aa32.24■■■□□ 2.75
SMDT1-201ENST00000331479 ATP2B4P23634 1241 aa32.24■■■□□ 2.75
SMDT1-201ENST00000331479 VGLL2Q8N8G2 317 aa32.24■■■□□ 2.75
SMDT1-201ENST00000331479 SUPT20HQ8NEM7 779 aa32.24■■■□□ 2.75
SMDT1-201ENST00000331479 IARSP41252 1262 aaKnown RBP32.23■■■□□ 2.75
SMDT1-201ENST00000331479 C9orf131Q5VYM1 1079 aa32.23■■■□□ 2.75
SMDT1-201ENST00000331479 IL15P40933 162 aaPredicted RBP32.22■■■□□ 2.75
SMDT1-201ENST00000331479 AOC3Q16853 763 aa32.22■■■□□ 2.75
SMDT1-201ENST00000331479 LEMD3Q9Y2U8 911 aa32.22■■■□□ 2.75
SMDT1-201ENST00000331479 SURF6O75683 361 aaKnown RBP32.21■■■□□ 2.75
SMDT1-201ENST00000331479 RNF181Q9P0P0 153 aa32.21■■■□□ 2.75
SMDT1-201ENST00000331479 ZNF804BA4D1E1 1349 aa32.21■■■□□ 2.75
SMDT1-201ENST00000331479 COL4A5P29400 1685 aa32.21■■■□□ 2.75
SMDT1-201ENST00000331479 WASHC4Q2M389 1173 aa32.2■■■□□ 2.75
SMDT1-201ENST00000331479 NOP58Q9Y2X3 529 aaKnown RBP32.2■■■□□ 2.75
SMDT1-201ENST00000331479 RIMBP2O15034 1052 aa32.19■■■□□ 2.74
SMDT1-201ENST00000331479 PPIP5K2O43314 1243 aa32.19■■■□□ 2.74
SMDT1-201ENST00000331479 HMMRO75330 724 aa32.19■■■□□ 2.74
SMDT1-201ENST00000331479 PDE8BO95263 885 aa32.19■■■□□ 2.74
SMDT1-201ENST00000331479 G3BP1Q13283 466 aaKnown RBP eCLIP32.19■■■□□ 2.74
SMDT1-201ENST00000331479 KLRK1P26718 216 aa32.19■■■□□ 2.74
SMDT1-201ENST00000331479 KCNJ4P48050 445 aa32.19■■■□□ 2.74
SMDT1-201ENST00000331479 KIAA2012Q0VF49 1180 aa32.19■■■□□ 2.74
SMDT1-201ENST00000331479 AAMPQ13685 434 aa32.19■■■□□ 2.74
SMDT1-201ENST00000331479 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP32.19■■■□□ 2.74
SMDT1-201ENST00000331479 CHD4Q14839 1912 aa32.18■■■□□ 2.74
SMDT1-201ENST00000331479 TXNRD3Q86VQ6 643 aa32.17■■■□□ 2.74
SMDT1-201ENST00000331479 LARGE2Q8N3Y3 721 aa32.17■■■□□ 2.74
SMDT1-201ENST00000331479 EYA3Q99504 573 aa32.17■■■□□ 2.74
SMDT1-201ENST00000331479 VPS33BQ9H267 617 aa32.17■■■□□ 2.74
SMDT1-201ENST00000331479 EXOC6BQ9Y2D4 811 aa32.17■■■□□ 2.74
SMDT1-201ENST00000331479 DICER1Q9UPY3 1922 aaKnown RBP32.17■■■□□ 2.74
SMDT1-201ENST00000331479 SASH1O94885 1247 aa32.16■■■□□ 2.74
SMDT1-201ENST00000331479 ZC3H12CQ9C0D7 883 aaKnown RBP32.16■■■□□ 2.74
SMDT1-201ENST00000331479 CEP126Q9P2H0 1117 aa32.16■■■□□ 2.74
SMDT1-201ENST00000331479 IRS2Q9Y4H2 1338 aa32.16■■■□□ 2.74
SMDT1-201ENST00000331479 TFCP2Q12800 502 aa32.15■■■□□ 2.74
SMDT1-201ENST00000331479 UBE4AQ14139 1066 aa32.15■■■□□ 2.74
SMDT1-201ENST00000331479 MED23Q9ULK4 1368 aa32.14■■■□□ 2.74
SMDT1-201ENST00000331479 OS9Q13438 667 aaPredicted RBP32.14■■■□□ 2.74
SMDT1-201ENST00000331479 FGFR2P21802 821 aa32.13■■■□□ 2.73
SMDT1-201ENST00000331479 PUM3Q15397 648 aaKnown RBP32.12■■■□□ 2.73
SMDT1-201ENST00000331479 DOK7Q18PE1 504 aa32.12■■■□□ 2.73
SMDT1-201ENST00000331479 TIAM2Q8IVF5 1701 aa32.12■■■□□ 2.73
SMDT1-201ENST00000331479 JDP2Q8WYK2 163 aa32.11■■■□□ 2.73
SMDT1-201ENST00000331479 DBNDD1Q9H9R9 158 aa32.11■■■□□ 2.73
SMDT1-201ENST00000331479 C15orf52Q6ZUT6 534 aaKnown RBP32.1■■■□□ 2.73
SMDT1-201ENST00000331479 NIM1KQ8IY84 436 aa32.1■■■□□ 2.73
SMDT1-201ENST00000331479 ATP2B3Q16720 1220 aa32.09■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms